Protein–RNA interactions for Protein: Q12348

RRI2, COP9 signalosome complex subunit 10, yeastyeast

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRI2Q12348 YLR280CYLR280C 351 nt9.89□□□□□ -0.83
RRI2Q12348 SAN1YDR143C 1833 nt9.89□□□□□ -0.83
RRI2Q12348 MAS1YLR163C 1389 nt9.88□□□□□ -0.83
RRI2Q12348 SNX3YOR357C 489 nt9.88□□□□□ -0.83
RRI2Q12348 RPD3YNL330C 1302 nt9.86□□□□□ -0.83
RRI2Q12348 TGA1tA(UGC)A 73 nt9.85□□□□□ -0.83
RRI2Q12348 tA(UGC)EtA(UGC)E 73 nt9.85□□□□□ -0.83
RRI2Q12348 tA(UGC)GtA(UGC)G 73 nt9.85□□□□□ -0.83
RRI2Q12348 tA(UGC)LtA(UGC)L 73 nt9.85□□□□□ -0.83
RRI2Q12348 tA(UGC)OtA(UGC)O 73 nt9.85□□□□□ -0.83
RRI2Q12348 YPT11YNL304W 1254 nt9.85□□□□□ -0.83
RRI2Q12348 YFR020WYFR020W 699 nt9.83□□□□□ -0.84
RRI2Q12348 CWP2YKL096W-A 279 nt9.83□□□□□ -0.84
RRI2Q12348 UGP1YKL035W 1500 nt9.82□□□□□ -0.84
RRI2Q12348 YPL108WYPL108W 507 nt9.82□□□□□ -0.84
RRI2Q12348 KGD2YDR148C 1392 nt9.82□□□□□ -0.84
RRI2Q12348 ESBP6YNL125C 2022 nt9.82□□□□□ -0.84
RRI2Q12348 RIM2YBR192W 1134 nt9.81□□□□□ -0.84
RRI2Q12348 KRR1YCL059C 951 nt9.8□□□□□ -0.84
RRI2Q12348 HIS2YFR025C 1008 nt9.8□□□□□ -0.84
RRI2Q12348 BUD20YLR074C 501 nt9.79□□□□□ -0.84
RRI2Q12348 SSL2YIL143C 2532 nt9.78□□□□□ -0.84
RRI2Q12348 FCY1YPR062W 477 nt9.78□□□□□ -0.84
RRI2Q12348 YJL160CYJL160C 864 nt9.76□□□□□ -0.85
RRI2Q12348 GAS1YMR307W 1680 nt9.76□□□□□ -0.85
RRI2Q12348 SBP1YHL034C 885 nt9.75□□□□□ -0.85
RRI2Q12348 RPC31YNL151C 756 nt9.74□□□□□ -0.85
RRI2Q12348 PAU21YOR394W 495 nt9.74□□□□□ -0.85
RRI2Q12348 PAU22YPL282C 495 nt9.74□□□□□ -0.85
RRI2Q12348 PTC6YCR079W 1329 nt9.74□□□□□ -0.85
RRI2Q12348 RSM7YJR113C 744 nt9.73□□□□□ -0.85
RRI2Q12348 YOR343CYOR343C 327 nt9.73□□□□□ -0.85
RRI2Q12348 HEM14YER014W 1620 nt9.72□□□□□ -0.85
RRI2Q12348 YMR166CYMR166C 1107 nt9.71□□□□□ -0.86
RRI2Q12348 EMC3YKL207W 762 nt9.7□□□□□ -0.86
RRI2Q12348 GRH1YDR517W 1119 nt9.69□□□□□ -0.86
RRI2Q12348 ODC1YPL134C 933 nt9.69□□□□□ -0.86
RRI2Q12348 HRA1HRA1 564 nt9.68□□□□□ -0.86
RRI2Q12348 DPL1YDR294C 1770 nt9.68□□□□□ -0.86
RRI2Q12348 YMR210WYMR210W 1350 nt9.66□□□□□ -0.86
RRI2Q12348 LSP1YPL004C 1026 nt9.66□□□□□ -0.86
RRI2Q12348 RPL12BYDR418W 498 nt9.64□□□□□ -0.87
RRI2Q12348 YMR316C-BYMR316C-B 309 nt9.64□□□□□ -0.87
RRI2Q12348 Q0010Q0010 387 nt9.64□□□□□ -0.87
RRI2Q12348 HSL7YBR133C 2484 nt9.64□□□□□ -0.87
RRI2Q12348 GGA2YHR108W 1758 nt9.63□□□□□ -0.87
RRI2Q12348 PET18YCR020C 648 nt9.62□□□□□ -0.87
RRI2Q12348 MRP1YDR347W 966 nt9.62□□□□□ -0.87
RRI2Q12348 RRT14YIL127C 621 nt9.62□□□□□ -0.87
RRI2Q12348 YAL016C-AYAL016C-A 315 nt9.62□□□□□ -0.87
RRI2Q12348 RFC1YOR217W 2586 nt9.61□□□□□ -0.87
RRI2Q12348 YLR460CYLR460C 1131 nt9.61□□□□□ -0.87
RRI2Q12348 THI3YDL080C 1830 nt9.61□□□□□ -0.87
RRI2Q12348 DTR1YBR180W 1719 nt9.6□□□□□ -0.87
RRI2Q12348 CAK1YFL029C 1107 nt9.6□□□□□ -0.87
RRI2Q12348 YRF1-2YER190W 5046 nt9.59□□□□□ -0.87
RRI2Q12348 OCH1YGL038C 1443 nt9.59□□□□□ -0.87
RRI2Q12348 YER156CYER156C 1017 nt9.59□□□□□ -0.87
RRI2Q12348 MDM35YKL053C-A 261 nt9.59□□□□□ -0.87
RRI2Q12348 MET22YOL064C 1074 nt9.59□□□□□ -0.87
RRI2Q12348 CHS7YHR142W 951 nt9.58□□□□□ -0.88
RRI2Q12348 RSC4YKR008W 1878 nt9.57□□□□□ -0.88
RRI2Q12348 YDR306CYDR306C 1437 nt9.57□□□□□ -0.88
RRI2Q12348 GPM1YKL152C 744 nt9.56□□□□□ -0.88
RRI2Q12348 ADA2YDR448W 1305 nt9.56□□□□□ -0.88
RRI2Q12348 ILV2YMR108W 2064 nt9.55□□□□□ -0.88
RRI2Q12348 GDH1YOR375C 1365 nt9.55□□□□□ -0.88
RRI2Q12348 MFT1YML062C 1179 nt9.55□□□□□ -0.88
RRI2Q12348 YGL114WYGL114W 2178 nt9.55□□□□□ -0.88
RRI2Q12348 PDC6YGR087C 1692 nt9.54□□□□□ -0.88
RRI2Q12348 UTR5YEL035C 501 nt9.53□□□□□ -0.88
RRI2Q12348 RNA170RNA170 169 nt9.52□□□□□ -0.89
RRI2Q12348 LEU4YNL104C 1860 nt9.52□□□□□ -0.89
RRI2Q12348 YDR467CYDR467C 327 nt9.51□□□□□ -0.89
RRI2Q12348 YIR035CYIR035C 765 nt9.51□□□□□ -0.89
RRI2Q12348 TAD2YJL035C 753 nt9.5□□□□□ -0.89
RRI2Q12348 OLA1YBR025C 1185 nt9.5□□□□□ -0.89
RRI2Q12348 AAC3YBR085W 924 nt9.5□□□□□ -0.89
RRI2Q12348 TMS1YDR105C 1422 nt9.49□□□□□ -0.89
RRI2Q12348 tL(UAA)B1tL(UAA)B1 84 nt9.49□□□□□ -0.89
RRI2Q12348 tL(UAA)B2tL(UAA)B2 84 nt9.49□□□□□ -0.89
RRI2Q12348 tL(UAA)DtL(UAA)D 84 nt9.49□□□□□ -0.89
RRI2Q12348 SUP51tL(UAA)J 84 nt9.49□□□□□ -0.89
RRI2Q12348 tL(UAA)KtL(UAA)K 84 nt9.49□□□□□ -0.89
RRI2Q12348 tL(UAA)LtL(UAA)L 84 nt9.49□□□□□ -0.89
RRI2Q12348 tL(UAA)NtL(UAA)N 84 nt9.49□□□□□ -0.89
RRI2Q12348 PUS7YOR243C 2031 nt9.49□□□□□ -0.89
RRI2Q12348 RIM8YGL045W 1629 nt9.49□□□□□ -0.89
RRI2Q12348 tE(CUC)DtE(CUC)D 72 nt9.48□□□□□ -0.89
RRI2Q12348 tE(CUC)ItE(CUC)I 72 nt9.48□□□□□ -0.89
RRI2Q12348 EDC2YER035W 438 nt9.48□□□□□ -0.89
RRI2Q12348 BXI1YNL305C 894 nt9.47□□□□□ -0.89
RRI2Q12348 ELP4YPL101W 1371 nt9.47□□□□□ -0.89
RRI2Q12348 YJR149WYJR149W 1215 nt9.46□□□□□ -0.9
RRI2Q12348 YOR268CYOR268C 399 nt9.46□□□□□ -0.9
RRI2Q12348 RPS6AYPL090C 711 nt9.46□□□□□ -0.9
RRI2Q12348 RPS6BYBR181C 711 nt9.46□□□□□ -0.9
RRI2Q12348 YPR084WYPR084W 1371 nt9.46□□□□□ -0.9
RRI2Q12348 DMA2YNL116W 1569 nt9.46□□□□□ -0.9
RRI2Q12348 YRF1-3YGR296W 5580 nt9.45□□□□□ -0.9
Retrieved 100 of 7,029 protein–RNA pairs in 283.6 ms