Protein–RNA interactions for Protein: Q04947

RTN1, Reticulon-like protein 1, yeastyeast

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTN1Q04947 tA(UGC)OtA(UGC)O 73 nt8.52□□□□□ -1.05
RTN1Q04947 REX2YLR059C 810 nt8.52□□□□□ -1.05
RTN1Q04947 MET1YKR069W 1782 nt8.51□□□□□ -1.05
RTN1Q04947 YLR280CYLR280C 351 nt8.51□□□□□ -1.05
RTN1Q04947 ERO1YML130C 1692 nt8.5□□□□□ -1.05
RTN1Q04947 HAP5YOR358W 729 nt8.5□□□□□ -1.05
RTN1Q04947 FCY1YPR062W 477 nt8.5□□□□□ -1.05
RTN1Q04947 SUV3YPL029W 2214 nt8.5□□□□□ -1.05
RTN1Q04947 VBA3YCL069W 1377 nt8.49□□□□□ -1.05
RTN1Q04947 GID8YMR135C 1368 nt8.49□□□□□ -1.05
RTN1Q04947 RPN14YGL004C 1254 nt8.49□□□□□ -1.05
RTN1Q04947 YGR210CYGR210C 1236 nt8.49□□□□□ -1.05
RTN1Q04947 YKL053WYKL053W 375 nt8.49□□□□□ -1.05
RTN1Q04947 BUD20YLR074C 501 nt8.49□□□□□ -1.05
RTN1Q04947 KES1YPL145C 1305 nt8.49□□□□□ -1.05
RTN1Q04947 YMR265CYMR265C 1386 nt8.48□□□□□ -1.05
RTN1Q04947 SRP54YPR088C 1626 nt8.48□□□□□ -1.05
RTN1Q04947 VMA11YPL234C 495 nt8.47□□□□□ -1.05
RTN1Q04947 COQ8YGL119W 1506 nt8.47□□□□□ -1.05
RTN1Q04947 LSR1LSR1 1175 nt8.45□□□□□ -1.06
RTN1Q04947 CRC1YOR100C 984 nt8.45□□□□□ -1.06
RTN1Q04947 YHR219WYHR219W 1875 nt8.45□□□□□ -1.06
RTN1Q04947 YKL133CYKL133C 1392 nt8.44□□□□□ -1.06
RTN1Q04947 MRS6YOR370C 1812 nt8.43□□□□□ -1.06
RTN1Q04947 YDR510C-AYDR510C-A 117 nt8.42□□□□□ -1.06
RTN1Q04947 HOL1YNR055C 1761 nt8.41□□□□□ -1.06
RTN1Q04947 SGA1YIL099W 1650 nt8.41□□□□□ -1.06
RTN1Q04947 YPT11YNL304W 1254 nt8.41□□□□□ -1.06
RTN1Q04947 SNX3YOR357C 489 nt8.41□□□□□ -1.06
RTN1Q04947 YPL108WYPL108W 507 nt8.41□□□□□ -1.06
RTN1Q04947 SAN1YDR143C 1833 nt8.4□□□□□ -1.07
RTN1Q04947 RPD3YNL330C 1302 nt8.39□□□□□ -1.07
RTN1Q04947 YFR020WYFR020W 699 nt8.39□□□□□ -1.07
RTN1Q04947 PAU21YOR394W 495 nt8.38□□□□□ -1.07
RTN1Q04947 PAU22YPL282C 495 nt8.38□□□□□ -1.07
RTN1Q04947 RIM2YBR192W 1134 nt8.38□□□□□ -1.07
RTN1Q04947 YOR343CYOR343C 327 nt8.37□□□□□ -1.07
RTN1Q04947 KGD2YDR148C 1392 nt8.36□□□□□ -1.07
RTN1Q04947 GRH1YDR517W 1119 nt8.36□□□□□ -1.07
RTN1Q04947 RSM7YJR113C 744 nt8.36□□□□□ -1.07
RTN1Q04947 YJL160CYJL160C 864 nt8.35□□□□□ -1.07
RTN1Q04947 EMC3YKL207W 762 nt8.35□□□□□ -1.07
RTN1Q04947 HRA1HRA1 564 nt8.34□□□□□ -1.07
RTN1Q04947 GAS1YMR307W 1680 nt8.33□□□□□ -1.08
RTN1Q04947 PTC6YCR079W 1329 nt8.32□□□□□ -1.08
RTN1Q04947 ZAP1YJL056C 2643 nt8.32□□□□□ -1.08
RTN1Q04947 HIS2YFR025C 1008 nt8.32□□□□□ -1.08
RTN1Q04947 LSP1YPL004C 1026 nt8.32□□□□□ -1.08
RTN1Q04947 YMR210WYMR210W 1350 nt8.32□□□□□ -1.08
RTN1Q04947 GNP1YDR508C 1992 nt8.31□□□□□ -1.08
RTN1Q04947 SBP1YHL034C 885 nt8.31□□□□□ -1.08
RTN1Q04947 RIM8YGL045W 1629 nt8.31□□□□□ -1.08
RTN1Q04947 RPL12BYDR418W 498 nt8.3□□□□□ -1.08
RTN1Q04947 YAL016C-AYAL016C-A 315 nt8.3□□□□□ -1.08
RTN1Q04947 YMR166CYMR166C 1107 nt8.3□□□□□ -1.08
RTN1Q04947 NSG2YNL156C 900 nt8.29□□□□□ -1.08
RTN1Q04947 KRR1YCL059C 951 nt8.28□□□□□ -1.08
RTN1Q04947 UGP1YKL035W 1500 nt8.28□□□□□ -1.08
RTN1Q04947 MRP1YDR347W 966 nt8.27□□□□□ -1.09
RTN1Q04947 YLR460CYLR460C 1131 nt8.27□□□□□ -1.09
RTN1Q04947 CWP2YKL096W-A 279 nt8.26□□□□□ -1.09
RTN1Q04947 PET18YCR020C 648 nt8.25□□□□□ -1.09
RTN1Q04947 RPC31YNL151C 756 nt8.25□□□□□ -1.09
RTN1Q04947 SSL2YIL143C 2532 nt8.23□□□□□ -1.09
RTN1Q04947 RRT14YIL127C 621 nt8.23□□□□□ -1.09
RTN1Q04947 YLR173WYLR173W 1827 nt8.22□□□□□ -1.09
RTN1Q04947 CAK1YFL029C 1107 nt8.22□□□□□ -1.09
RTN1Q04947 MFT1YML062C 1179 nt8.22□□□□□ -1.09
RTN1Q04947 CHS7YHR142W 951 nt8.21□□□□□ -1.1
RTN1Q04947 GDH1YOR375C 1365 nt8.2□□□□□ -1.1
RTN1Q04947 OCH1YGL038C 1443 nt8.2□□□□□ -1.1
RTN1Q04947 TOM71YHR117W 1920 nt8.19□□□□□ -1.1
RTN1Q04947 ADA2YDR448W 1305 nt8.19□□□□□ -1.1
RTN1Q04947 YDR306CYDR306C 1437 nt8.19□□□□□ -1.1
RTN1Q04947 GGA2YHR108W 1758 nt8.18□□□□□ -1.1
RTN1Q04947 ODC1YPL134C 933 nt8.18□□□□□ -1.1
RTN1Q04947 DPL1YDR294C 1770 nt8.17□□□□□ -1.1
RTN1Q04947 UTR5YEL035C 501 nt8.17□□□□□ -1.1
RTN1Q04947 MET22YOL064C 1074 nt8.17□□□□□ -1.1
RTN1Q04947 OLA1YBR025C 1185 nt8.17□□□□□ -1.1
RTN1Q04947 YOR268CYOR268C 399 nt8.17□□□□□ -1.1
RTN1Q04947 YGL114WYGL114W 2178 nt8.17□□□□□ -1.1
RTN1Q04947 YER156CYER156C 1017 nt8.16□□□□□ -1.1
RTN1Q04947 tL(UAA)B1tL(UAA)B1 84 nt8.16□□□□□ -1.1
RTN1Q04947 tL(UAA)B2tL(UAA)B2 84 nt8.16□□□□□ -1.1
RTN1Q04947 tL(UAA)DtL(UAA)D 84 nt8.16□□□□□ -1.1
RTN1Q04947 SUP51tL(UAA)J 84 nt8.16□□□□□ -1.1
RTN1Q04947 tL(UAA)KtL(UAA)K 84 nt8.16□□□□□ -1.1
RTN1Q04947 tL(UAA)LtL(UAA)L 84 nt8.16□□□□□ -1.1
RTN1Q04947 tL(UAA)NtL(UAA)N 84 nt8.16□□□□□ -1.1
RTN1Q04947 TPN1YGL186C 1740 nt8.15□□□□□ -1.1
RTN1Q04947 YPR084WYPR084W 1371 nt8.15□□□□□ -1.1
RTN1Q04947 YMR316C-BYMR316C-B 309 nt8.15□□□□□ -1.1
RTN1Q04947 THI3YDL080C 1830 nt8.15□□□□□ -1.11
RTN1Q04947 TAD2YJL035C 753 nt8.14□□□□□ -1.11
RTN1Q04947 YJR149WYJR149W 1215 nt8.13□□□□□ -1.11
RTN1Q04947 GPM1YKL152C 744 nt8.13□□□□□ -1.11
RTN1Q04947 ELP4YPL101W 1371 nt8.12□□□□□ -1.11
RTN1Q04947 YDR467CYDR467C 327 nt8.12□□□□□ -1.11
RTN1Q04947 KAE1YKR038C 1161 nt8.12□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 87.2 ms