Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 tA(AGC)FtA(AGC)F 73 nt8.6□□□□□ -1.03
VPS9P54787 tA(AGC)GtA(AGC)G 73 nt8.6□□□□□ -1.03
VPS9P54787 tA(AGC)HtA(AGC)H 73 nt8.6□□□□□ -1.03
VPS9P54787 tA(AGC)JtA(AGC)J 73 nt8.6□□□□□ -1.03
VPS9P54787 tA(AGC)K1tA(AGC)K1 73 nt8.6□□□□□ -1.03
VPS9P54787 tA(AGC)K2tA(AGC)K2 73 nt8.6□□□□□ -1.03
VPS9P54787 tA(AGC)LtA(AGC)L 73 nt8.6□□□□□ -1.03
VPS9P54787 tA(AGC)M1tA(AGC)M1 73 nt8.6□□□□□ -1.03
VPS9P54787 tA(AGC)M2tA(AGC)M2 73 nt8.6□□□□□ -1.03
VPS9P54787 tA(AGC)PtA(AGC)P 73 nt8.6□□□□□ -1.03
VPS9P54787 ADH3YMR083W 1128 nt8.6□□□□□ -1.03
VPS9P54787 PUP1YOR157C 786 nt8.6□□□□□ -1.03
VPS9P54787 SRP54YPR088C 1626 nt8.6□□□□□ -1.03
VPS9P54787 IPL1YPL209C 1104 nt8.59□□□□□ -1.03
VPS9P54787 YHL008CYHL008C 1884 nt8.59□□□□□ -1.03
VPS9P54787 PHB2YGR231C 933 nt8.58□□□□□ -1.04
VPS9P54787 FLX1YIL134W 936 nt8.58□□□□□ -1.04
VPS9P54787 KGD2YDR148C 1392 nt8.58□□□□□ -1.04
VPS9P54787 SAN1YDR143C 1833 nt8.57□□□□□ -1.04
VPS9P54787 YCR025CYCR025C 411 nt8.57□□□□□ -1.04
VPS9P54787 MOB1YIL106W 945 nt8.57□□□□□ -1.04
VPS9P54787 DPL1YDR294C 1770 nt8.56□□□□□ -1.04
VPS9P54787 SDS24YBR214W 1584 nt8.55□□□□□ -1.04
VPS9P54787 SBP1YHL034C 885 nt8.54□□□□□ -1.04
VPS9P54787 YJR154WYJR154W 1041 nt8.53□□□□□ -1.04
VPS9P54787 YPT11YNL304W 1254 nt8.53□□□□□ -1.04
VPS9P54787 GAL2YLR081W 1725 nt8.53□□□□□ -1.04
VPS9P54787 ENO1YGR254W 1314 nt8.53□□□□□ -1.04
VPS9P54787 CYC3YAL039C 810 nt8.52□□□□□ -1.05
VPS9P54787 VBA3YCL069W 1377 nt8.5□□□□□ -1.05
VPS9P54787 GAS1YMR307W 1680 nt8.5□□□□□ -1.05
VPS9P54787 YDR467CYDR467C 327 nt8.5□□□□□ -1.05
VPS9P54787 HXT10YFL011W 1641 nt8.5□□□□□ -1.05
VPS9P54787 SLG1YOR008C 1137 nt8.49□□□□□ -1.05
VPS9P54787 PTC6YCR079W 1329 nt8.49□□□□□ -1.05
VPS9P54787 LEU4YNL104C 1860 nt8.49□□□□□ -1.05
VPS9P54787 INH1YDL181W 258 nt8.48□□□□□ -1.05
VPS9P54787 GGA2YHR108W 1758 nt8.47□□□□□ -1.05
VPS9P54787 LYS20YDL182W 1287 nt8.46□□□□□ -1.06
VPS9P54787 GPM1YKL152C 744 nt8.45□□□□□ -1.06
VPS9P54787 SRP102YKL154W 735 nt8.45□□□□□ -1.06
VPS9P54787 GTB1YDR221W 2109 nt8.44□□□□□ -1.06
VPS9P54787 AGP3YFL055W 1677 nt8.44□□□□□ -1.06
VPS9P54787 RSM7YJR113C 744 nt8.44□□□□□ -1.06
VPS9P54787 THI3YDL080C 1830 nt8.43□□□□□ -1.06
VPS9P54787 SER2YGR208W 930 nt8.43□□□□□ -1.06
VPS9P54787 YLR280CYLR280C 351 nt8.43□□□□□ -1.06
VPS9P54787 YCP4YCR004C 744 nt8.42□□□□□ -1.06
VPS9P54787 YMR316C-BYMR316C-B 309 nt8.42□□□□□ -1.06
VPS9P54787 ERO1YML130C 1692 nt8.41□□□□□ -1.06
VPS9P54787 tE(CUC)DtE(CUC)D 72 nt8.41□□□□□ -1.06
VPS9P54787 tE(CUC)ItE(CUC)I 72 nt8.41□□□□□ -1.06
VPS9P54787 HTS1YPR033C 1641 nt8.4□□□□□ -1.06
VPS9P54787 YFR020WYFR020W 699 nt8.4□□□□□ -1.06
VPS9P54787 YBL095WYBL095W 813 nt8.4□□□□□ -1.06
VPS9P54787 SAM50YNL026W 1455 nt8.39□□□□□ -1.07
VPS9P54787 YMC2YBR104W 990 nt8.38□□□□□ -1.07
VPS9P54787 HMG2YLR450W 3138 nt8.38□□□□□ -1.07
VPS9P54787 TOK1YJL093C 2076 nt8.37□□□□□ -1.07
VPS9P54787 NBA1YOL070C 1506 nt8.36□□□□□ -1.07
VPS9P54787 NPP2YEL016C 1482 nt8.36□□□□□ -1.07
VPS9P54787 TGA1tA(UGC)A 73 nt8.35□□□□□ -1.07
VPS9P54787 tA(UGC)EtA(UGC)E 73 nt8.35□□□□□ -1.07
VPS9P54787 tA(UGC)GtA(UGC)G 73 nt8.35□□□□□ -1.07
VPS9P54787 tA(UGC)LtA(UGC)L 73 nt8.35□□□□□ -1.07
VPS9P54787 tA(UGC)OtA(UGC)O 73 nt8.35□□□□□ -1.07
VPS9P54787 YGR210CYGR210C 1236 nt8.35□□□□□ -1.07
VPS9P54787 YLR460CYLR460C 1131 nt8.34□□□□□ -1.07
VPS9P54787 SWM1YDR260C 513 nt8.33□□□□□ -1.08
VPS9P54787 MRS4YKR052C 915 nt8.33□□□□□ -1.08
VPS9P54787 FRA1YLL029W 2250 nt8.32□□□□□ -1.08
VPS9P54787 FCY1YPR062W 477 nt8.32□□□□□ -1.08
VPS9P54787 AAC3YBR085W 924 nt8.32□□□□□ -1.08
VPS9P54787 TMS1YDR105C 1422 nt8.3□□□□□ -1.08
VPS9P54787 YMR007WYMR007W 381 nt8.3□□□□□ -1.08
VPS9P54787 YIR035CYIR035C 765 nt8.29□□□□□ -1.08
VPS9P54787 YPL108WYPL108W 507 nt8.29□□□□□ -1.08
VPS9P54787 TPO4YOR273C 1980 nt8.28□□□□□ -1.08
VPS9P54787 AAT1YKL106W 1356 nt8.28□□□□□ -1.08
VPS9P54787 CHS7YHR142W 951 nt8.28□□□□□ -1.08
VPS9P54787 YMR166CYMR166C 1107 nt8.28□□□□□ -1.08
VPS9P54787 TPN1YGL186C 1740 nt8.28□□□□□ -1.08
VPS9P54787 YIA6YIL006W 1122 nt8.27□□□□□ -1.09
VPS9P54787 YJL009WYJL009W 327 nt8.27□□□□□ -1.09
VPS9P54787 YJR149WYJR149W 1215 nt8.27□□□□□ -1.09
VPS9P54787 RCR1YBR005W 642 nt8.27□□□□□ -1.09
VPS9P54787 NSG2YNL156C 900 nt8.26□□□□□ -1.09
VPS9P54787 OLA1YBR025C 1185 nt8.26□□□□□ -1.09
VPS9P54787 FET5YFL041W 1869 nt8.26□□□□□ -1.09
VPS9P54787 BUB2YMR055C 921 nt8.25□□□□□ -1.09
VPS9P54787 MTO1YGL236C 2010 nt8.25□□□□□ -1.09
VPS9P54787 RIB1YBL033C 1038 nt8.24□□□□□ -1.09
VPS9P54787 MET22YOL064C 1074 nt8.24□□□□□ -1.09
VPS9P54787 LSP1YPL004C 1026 nt8.24□□□□□ -1.09
VPS9P54787 HXK1YFR053C 1458 nt8.23□□□□□ -1.09
VPS9P54787 ALD5YER073W 1563 nt8.22□□□□□ -1.09
VPS9P54787 SOD2YHR008C 702 nt8.22□□□□□ -1.09
VPS9P54787 URA8YJR103W 1737 nt8.22□□□□□ -1.09
VPS9P54787 OCH1YGL038C 1443 nt8.21□□□□□ -1.09
VPS9P54787 CAK1YFL029C 1107 nt8.21□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms