Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 GSF2YML048W 1212 nt8.59□□□□□ -1.03
TY4A-JP47023 PAU19YMR325W 375 nt8.59□□□□□ -1.03
TY4A-JP47023 YOR300WYOR300W 309 nt8.59□□□□□ -1.03
TY4A-JP47023 IML3YBR107C 738 nt8.59□□□□□ -1.03
TY4A-JP47023 NBA1YOL070C 1506 nt8.59□□□□□ -1.03
TY4A-JP47023 YIL177CYIL177C 5277 nt8.58□□□□□ -1.04
TY4A-JP47023 AI5_BETAQ0075 1065 nt8.58□□□□□ -1.04
TY4A-JP47023 LSR1LSR1 1175 nt8.56□□□□□ -1.04
TY4A-JP47023 PAR32YDL173W 888 nt8.55□□□□□ -1.04
TY4A-JP47023 CDD1YLR245C 429 nt8.55□□□□□ -1.04
TY4A-JP47023 RRT8YOL048C 1029 nt8.55□□□□□ -1.04
TY4A-JP47023 CIR2YOR356W 1896 nt8.55□□□□□ -1.04
TY4A-JP47023 YEN1YER041W 2280 nt8.54□□□□□ -1.04
TY4A-JP47023 YFR036W-AYFR036W-A 651 nt8.54□□□□□ -1.04
TY4A-JP47023 FAF1YIL019W 1041 nt8.54□□□□□ -1.04
TY4A-JP47023 YHR219WYHR219W 1875 nt8.53□□□□□ -1.04
TY4A-JP47023 AGP3YFL055W 1677 nt8.53□□□□□ -1.04
TY4A-JP47023 MEX67YPL169C 1800 nt8.52□□□□□ -1.04
TY4A-JP47023 CMK2YOL016C 1344 nt8.52□□□□□ -1.05
TY4A-JP47023 FTH1YBR207W 1398 nt8.51□□□□□ -1.05
TY4A-JP47023 LSM5YER146W 282 nt8.51□□□□□ -1.05
TY4A-JP47023 TOM20YGR082W 552 nt8.51□□□□□ -1.05
TY4A-JP47023 SPS100YHR139C 981 nt8.51□□□□□ -1.05
TY4A-JP47023 YRF1-3YGR296W 5580 nt8.51□□□□□ -1.05
TY4A-JP47023 YRF1-6YNL339C 5580 nt8.51□□□□□ -1.05
TY4A-JP47023 YRF1-7YPL283C 5580 nt8.51□□□□□ -1.05
TY4A-JP47023 TIM44YIL022W 1296 nt8.5□□□□□ -1.05
TY4A-JP47023 YHC3YJL059W 1227 nt8.5□□□□□ -1.05
TY4A-JP47023 RPD3YNL330C 1302 nt8.49□□□□□ -1.05
TY4A-JP47023 LPD1YFL018C 1500 nt8.48□□□□□ -1.05
TY4A-JP47023 ERG13YML126C 1476 nt8.47□□□□□ -1.05
TY4A-JP47023 KRR1YCL059C 951 nt8.47□□□□□ -1.05
TY4A-JP47023 ASP3-1YLR155C 1089 nt8.46□□□□□ -1.06
TY4A-JP47023 ASP3-2YLR157C 1089 nt8.46□□□□□ -1.06
TY4A-JP47023 ASP3-3YLR158C 1089 nt8.46□□□□□ -1.06
TY4A-JP47023 ASP3-4YLR160C 1089 nt8.46□□□□□ -1.06
TY4A-JP47023 ARA2YMR041C 1008 nt8.46□□□□□ -1.06
TY4A-JP47023 SLG1YOR008C 1137 nt8.46□□□□□ -1.06
TY4A-JP47023 YTH1YPR107C 627 nt8.46□□□□□ -1.06
TY4A-JP47023 SAC7YDR389W 1965 nt8.45□□□□□ -1.06
TY4A-JP47023 NAS2YIL007C 663 nt8.45□□□□□ -1.06
TY4A-JP47023 YLR122CYLR122C 378 nt8.45□□□□□ -1.06
TY4A-JP47023 CCR4YAL021C 2514 nt8.45□□□□□ -1.06
TY4A-JP47023 HEL1YKR017C 1656 nt8.44□□□□□ -1.06
TY4A-JP47023 TVP23YDR084C 600 nt8.44□□□□□ -1.06
TY4A-JP47023 IGD1YFR017C 588 nt8.44□□□□□ -1.06
TY4A-JP47023 DLD3YEL071W 1491 nt8.44□□□□□ -1.06
TY4A-JP47023 BAP3YDR046C 1815 nt8.43□□□□□ -1.06
TY4A-JP47023 ENT4YLL038C 744 nt8.43□□□□□ -1.06
TY4A-JP47023 RBS1YDL189W 1374 nt8.43□□□□□ -1.06
TY4A-JP47023 INH1YDL181W 258 nt8.42□□□□□ -1.06
TY4A-JP47023 ADE8YDR408C 645 nt8.42□□□□□ -1.06
TY4A-JP47023 OPI3YJR073C 621 nt8.42□□□□□ -1.06
TY4A-JP47023 NDE1YMR145C 1683 nt8.41□□□□□ -1.06
TY4A-JP47023 MIM1YOL026C 342 nt8.4□□□□□ -1.06
TY4A-JP47023 TIP1YBR067C 633 nt8.4□□□□□ -1.06
TY4A-JP47023 YJR114WYJR114W 393 nt8.39□□□□□ -1.07
TY4A-JP47023 YLR046CYLR046C 813 nt8.39□□□□□ -1.07
TY4A-JP47023 RIM2YBR192W 1134 nt8.39□□□□□ -1.07
TY4A-JP47023 tD(GUC)BtD(GUC)B 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)DtD(GUC)D 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)G1tD(GUC)G1 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)G2tD(GUC)G2 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)I1tD(GUC)I1 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)I2tD(GUC)I2 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)J1tD(GUC)J1 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)J2tD(GUC)J2 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)J3tD(GUC)J3 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)J4tD(GUC)J4 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)KtD(GUC)K 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)L1tD(GUC)L1 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)L2tD(GUC)L2 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)MtD(GUC)M 72 nt8.38□□□□□ -1.07
TY4A-JP47023 tD(GUC)OtD(GUC)O 72 nt8.38□□□□□ -1.07
TY4A-JP47023 AIM1YAL046C 357 nt8.38□□□□□ -1.07
TY4A-JP47023 ABZ2YMR289W 1125 nt8.38□□□□□ -1.07
TY4A-JP47023 HBS1YKR084C 1836 nt8.38□□□□□ -1.07
TY4A-JP47023 PUS5YLR165C 765 nt8.37□□□□□ -1.07
TY4A-JP47023 REG2YBR050C 1017 nt8.37□□□□□ -1.07
TY4A-JP47023 THP3YPR045C 1413 nt8.37□□□□□ -1.07
TY4A-JP47023 FHN1YGR131W 525 nt8.36□□□□□ -1.07
TY4A-JP47023 RPC31YNL151C 756 nt8.36□□□□□ -1.07
TY4A-JP47023 SUV3YPL029W 2214 nt8.35□□□□□ -1.07
TY4A-JP47023 ASN2YGR124W 1719 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)DtA(AGC)D 73 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)FtA(AGC)F 73 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)GtA(AGC)G 73 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)HtA(AGC)H 73 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)JtA(AGC)J 73 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)K1tA(AGC)K1 73 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)K2tA(AGC)K2 73 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)LtA(AGC)L 73 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)M1tA(AGC)M1 73 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)M2tA(AGC)M2 73 nt8.35□□□□□ -1.07
TY4A-JP47023 tA(AGC)PtA(AGC)P 73 nt8.35□□□□□ -1.07
TY4A-JP47023 VMA11YPL234C 495 nt8.35□□□□□ -1.07
TY4A-JP47023 CKI1YLR133W 1749 nt8.34□□□□□ -1.07
TY4A-JP47023 EHD3YDR036C 1503 nt8.34□□□□□ -1.08
TY4A-JP47023 YOS9YDR057W 1629 nt8.33□□□□□ -1.08
TY4A-JP47023 GFA1YKL104C 2154 nt8.33□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 55.3 ms