Protein–RNA interactions for Protein: P38780

YHR054C, Uncharacterized protein YHR054C, yeastyeast

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YHR054CP38780 VBA3YCL069W 1377 nt8.87□□□□□ -0.99
YHR054CP38780 TGA1tA(UGC)A 73 nt8.87□□□□□ -0.99
YHR054CP38780 tA(UGC)EtA(UGC)E 73 nt8.87□□□□□ -0.99
YHR054CP38780 tA(UGC)GtA(UGC)G 73 nt8.87□□□□□ -0.99
YHR054CP38780 tA(UGC)LtA(UGC)L 73 nt8.87□□□□□ -0.99
YHR054CP38780 tA(UGC)OtA(UGC)O 73 nt8.87□□□□□ -0.99
YHR054CP38780 YLR280CYLR280C 351 nt8.87□□□□□ -0.99
YHR054CP38780 SNX3YOR357C 489 nt8.87□□□□□ -0.99
YHR054CP38780 RPD3YNL330C 1302 nt8.86□□□□□ -0.99
YHR054CP38780 ERO1YML130C 1692 nt8.85□□□□□ -0.99
YHR054CP38780 YGR210CYGR210C 1236 nt8.84□□□□□ -0.99
YHR054CP38780 RCR1YBR005W 642 nt8.84□□□□□ -0.99
YHR054CP38780 FCY1YPR062W 477 nt8.84□□□□□ -0.99
YHR054CP38780 POP2YNR052C 1302 nt8.83□□□□□ -1
YHR054CP38780 HIS2YFR025C 1008 nt8.83□□□□□ -1
YHR054CP38780 SAN1YDR143C 1833 nt8.82□□□□□ -1
YHR054CP38780 YER152W-AYER152W-A 567 nt8.81□□□□□ -1
YHR054CP38780 UGP1YKL035W 1500 nt8.8□□□□□ -1
YHR054CP38780 YPT11YNL304W 1254 nt8.8□□□□□ -1
YHR054CP38780 RIM2YBR192W 1134 nt8.8□□□□□ -1
YHR054CP38780 KGD2YDR148C 1392 nt8.8□□□□□ -1
YHR054CP38780 ZAP1YJL056C 2643 nt8.79□□□□□ -1
YHR054CP38780 YDR510C-AYDR510C-A 117 nt8.79□□□□□ -1
YHR054CP38780 GTB1YDR221W 2109 nt8.78□□□□□ -1
YHR054CP38780 HEM14YER014W 1620 nt8.77□□□□□ -1.01
YHR054CP38780 HMG2YLR450W 3138 nt8.76□□□□□ -1.01
YHR054CP38780 YFR020WYFR020W 699 nt8.75□□□□□ -1.01
YHR054CP38780 SBP1YHL034C 885 nt8.75□□□□□ -1.01
YHR054CP38780 YPL108WYPL108W 507 nt8.74□□□□□ -1.01
YHR054CP38780 GAS1YMR307W 1680 nt8.74□□□□□ -1.01
YHR054CP38780 PTC6YCR079W 1329 nt8.74□□□□□ -1.01
YHR054CP38780 RSM7YJR113C 744 nt8.73□□□□□ -1.01
YHR054CP38780 CWP2YKL096W-A 279 nt8.73□□□□□ -1.01
YHR054CP38780 RPC31YNL151C 756 nt8.73□□□□□ -1.01
YHR054CP38780 SSL2YIL143C 2532 nt8.72□□□□□ -1.01
YHR054CP38780 KRR1YCL059C 951 nt8.71□□□□□ -1.02
YHR054CP38780 BUD20YLR074C 501 nt8.71□□□□□ -1.02
YHR054CP38780 MAS1YLR163C 1389 nt8.71□□□□□ -1.02
YHR054CP38780 ODC1YPL134C 933 nt8.69□□□□□ -1.02
YHR054CP38780 YJL160CYJL160C 864 nt8.68□□□□□ -1.02
YHR054CP38780 TOK1YJL093C 2076 nt8.67□□□□□ -1.02
YHR054CP38780 TPO4YOR273C 1980 nt8.67□□□□□ -1.02
YHR054CP38780 LSP1YPL004C 1026 nt8.67□□□□□ -1.02
YHR054CP38780 EMC3YKL207W 762 nt8.66□□□□□ -1.02
YHR054CP38780 YMR166CYMR166C 1107 nt8.66□□□□□ -1.02
YHR054CP38780 MAE1YKL029C 2010 nt8.66□□□□□ -1.02
YHR054CP38780 GRH1YDR517W 1119 nt8.65□□□□□ -1.02
YHR054CP38780 PAU21YOR394W 495 nt8.64□□□□□ -1.03
YHR054CP38780 PAU22YPL282C 495 nt8.64□□□□□ -1.03
YHR054CP38780 GAL2YLR081W 1725 nt8.63□□□□□ -1.03
YHR054CP38780 YMR210WYMR210W 1350 nt8.63□□□□□ -1.03
YHR054CP38780 YLR460CYLR460C 1131 nt8.63□□□□□ -1.03
YHR054CP38780 DPL1YDR294C 1770 nt8.63□□□□□ -1.03
YHR054CP38780 GGA2YHR108W 1758 nt8.62□□□□□ -1.03
YHR054CP38780 MCM5YLR274W 2328 nt8.62□□□□□ -1.03
YHR054CP38780 RIM8YGL045W 1629 nt8.62□□□□□ -1.03
YHR054CP38780 YGL114WYGL114W 2178 nt8.61□□□□□ -1.03
YHR054CP38780 YOR343CYOR343C 327 nt8.61□□□□□ -1.03
YHR054CP38780 PET18YCR020C 648 nt8.6□□□□□ -1.03
YHR054CP38780 HRA1HRA1 564 nt8.6□□□□□ -1.03
YHR054CP38780 YDR467CYDR467C 327 nt8.59□□□□□ -1.03
YHR054CP38780 CAK1YFL029C 1107 nt8.59□□□□□ -1.03
YHR054CP38780 MDM35YKL053C-A 261 nt8.59□□□□□ -1.03
YHR054CP38780 YMR316C-BYMR316C-B 309 nt8.59□□□□□ -1.03
YHR054CP38780 THI3YDL080C 1830 nt8.59□□□□□ -1.03
YHR054CP38780 GPM1YKL152C 744 nt8.58□□□□□ -1.04
YHR054CP38780 CHS7YHR142W 951 nt8.57□□□□□ -1.04
YHR054CP38780 URA8YJR103W 1737 nt8.57□□□□□ -1.04
YHR054CP38780 RRT14YIL127C 621 nt8.56□□□□□ -1.04
YHR054CP38780 OCH1YGL038C 1443 nt8.55□□□□□ -1.04
YHR054CP38780 MET22YOL064C 1074 nt8.55□□□□□ -1.04
YHR054CP38780 LEU4YNL104C 1860 nt8.55□□□□□ -1.04
YHR054CP38780 MFT1YML062C 1179 nt8.54□□□□□ -1.04
YHR054CP38780 OLA1YBR025C 1185 nt8.54□□□□□ -1.04
YHR054CP38780 YMR209CYMR209C 1374 nt8.53□□□□□ -1.04
YHR054CP38780 MRP1YDR347W 966 nt8.53□□□□□ -1.04
YHR054CP38780 UTR5YEL035C 501 nt8.53□□□□□ -1.04
YHR054CP38780 YAL016C-AYAL016C-A 315 nt8.53□□□□□ -1.04
YHR054CP38780 RSC4YKR008W 1878 nt8.53□□□□□ -1.04
YHR054CP38780 RPL12BYDR418W 498 nt8.52□□□□□ -1.05
YHR054CP38780 DMA2YNL116W 1569 nt8.5□□□□□ -1.05
YHR054CP38780 ADA2YDR448W 1305 nt8.5□□□□□ -1.05
YHR054CP38780 GDH1YOR375C 1365 nt8.49□□□□□ -1.05
YHR054CP38780 YIR035CYIR035C 765 nt8.49□□□□□ -1.05
YHR054CP38780 YBL095WYBL095W 813 nt8.49□□□□□ -1.05
YHR054CP38780 RPS6AYPL090C 711 nt8.49□□□□□ -1.05
YHR054CP38780 RPS6BYBR181C 711 nt8.49□□□□□ -1.05
YHR054CP38780 YPR084WYPR084W 1371 nt8.48□□□□□ -1.05
YHR054CP38780 INH1YDL181W 258 nt8.48□□□□□ -1.05
YHR054CP38780 tE(CUC)DtE(CUC)D 72 nt8.48□□□□□ -1.05
YHR054CP38780 tE(CUC)ItE(CUC)I 72 nt8.48□□□□□ -1.05
YHR054CP38780 YER156CYER156C 1017 nt8.48□□□□□ -1.05
YHR054CP38780 YJR149WYJR149W 1215 nt8.48□□□□□ -1.05
YHR054CP38780 YMC2YBR104W 990 nt8.48□□□□□ -1.05
YHR054CP38780 PDC6YGR087C 1692 nt8.48□□□□□ -1.05
YHR054CP38780 RNA170RNA170 169 nt8.47□□□□□ -1.05
YHR054CP38780 BXI1YNL305C 894 nt8.47□□□□□ -1.05
YHR054CP38780 AAC3YBR085W 924 nt8.46□□□□□ -1.06
YHR054CP38780 TMS1YDR105C 1422 nt8.46□□□□□ -1.06
YHR054CP38780 YPT31YER031C 672 nt8.45□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms