Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 GTT3YEL017W 1014 nt7.88□□□□□ -1.15 RIP-Chip
PUB1P32588 RUF21RUF21 707 nt7.88□□□□□ -1.15
PUB1P32588 VPS28YPL065W 729 nt7.88□□□□□ -1.15
PUB1P32588 RIM2YBR192W 1134 nt7.88□□□□□ -1.15
PUB1P32588 RIB2YOL066C 1776 nt7.88□□□□□ -1.15
PUB1P32588 ICE2YIL090W 1476 nt7.87□□□□□ -1.15 RIP-Chip
PUB1P32588 MPS2YGL075C 1164 nt7.87□□□□□ -1.15
PUB1P32588 IMO32YGR031W 1029 nt7.87□□□□□ -1.15
PUB1P32588 COX3Q0275 810 nt7.87□□□□□ -1.15 RIP-Chip
PUB1P32588 YNL234WYNL234W 1281 nt7.86□□□□□ -1.15
PUB1P32588 NDJ1YOL104C 1059 nt7.86□□□□□ -1.15 RIP-Chip
PUB1P32588 APM1YPL259C 1428 nt7.86□□□□□ -1.15
PUB1P32588 PCL10YGL134W 1302 nt7.85□□□□□ -1.15
PUB1P32588 DPL1YDR294C 1770 nt7.85□□□□□ -1.15
PUB1P32588 ADE8YDR408C 645 nt7.85□□□□□ -1.15
PUB1P32588 ELO1YJL196C 933 nt7.85□□□□□ -1.15 RIP-Chip
PUB1P32588 YNR064CYNR064C 873 nt7.85□□□□□ -1.15
PUB1P32588 INH1YDL181W 258 nt7.84□□□□□ -1.15 RIP-Chip
PUB1P32588 PUS5YLR165C 765 nt7.84□□□□□ -1.15
PUB1P32588 YMR265CYMR265C 1386 nt7.84□□□□□ -1.16 RIP-Chip
PUB1P32588 YEL008WYEL008W 381 nt7.83□□□□□ -1.16
PUB1P32588 YJR114WYJR114W 393 nt7.83□□□□□ -1.16
PUB1P32588 YLR311CYLR311C 348 nt7.83□□□□□ -1.16
PUB1P32588 ATG17YLR423C 1254 nt7.83□□□□□ -1.16
PUB1P32588 FAR3YMR052W 615 nt7.82□□□□□ -1.16
PUB1P32588 YMR147WYMR147W 672 nt7.82□□□□□ -1.16 RIP-Chip
PUB1P32588 LEU4YNL104C 1860 nt7.81□□□□□ -1.16 RIP-Chip
PUB1P32588 RPN14YGL004C 1254 nt7.81□□□□□ -1.16
PUB1P32588 DIA1YMR316W 1011 nt7.81□□□□□ -1.16
PUB1P32588 HAP5YOR358W 729 nt7.81□□□□□ -1.16
PUB1P32588 NBA1YOL070C 1506 nt7.81□□□□□ -1.16
PUB1P32588 YDL157CYDL157C 357 nt7.8□□□□□ -1.16
PUB1P32588 GET2YER083C 858 nt7.79□□□□□ -1.16 RIP-Chip
PUB1P32588 PCP1YGR101W 1041 nt7.79□□□□□ -1.16 RIP-Chip
PUB1P32588 SED5YLR026C 1023 nt7.79□□□□□ -1.16
PUB1P32588 HXK1YFR053C 1458 nt7.79□□□□□ -1.16
PUB1P32588 DAK2YFL053W 1776 nt7.79□□□□□ -1.16
PUB1P32588 KEL3YPL263C 1956 nt7.79□□□□□ -1.16
PUB1P32588 SFP1YLR403W 2052 nt7.79□□□□□ -1.16 RIP-Chip
PUB1P32588 SUV3YPL029W 2214 nt7.78□□□□□ -1.16
PUB1P32588 YPR1YDR368W 939 nt7.78□□□□□ -1.16
PUB1P32588 CPD1YGR247W 720 nt7.78□□□□□ -1.16 RIP-Chip
PUB1P32588 SWP1YMR149W 861 nt7.78□□□□□ -1.16 RIP-Chip
PUB1P32588 SCO2YBR024W 906 nt7.78□□□□□ -1.16
PUB1P32588 ALD5YER073W 1563 nt7.78□□□□□ -1.16
PUB1P32588 YDR467CYDR467C 327 nt7.77□□□□□ -1.17
PUB1P32588 OPI3YJR073C 621 nt7.77□□□□□ -1.17 RIP-Chip
PUB1P32588 TSR2YLR435W 618 nt7.77□□□□□ -1.17
PUB1P32588 SUA5YGL169W 1281 nt7.76□□□□□ -1.17
PUB1P32588 NEJ1YLR265C 1029 nt7.76□□□□□ -1.17
PUB1P32588 YOR072WYOR072W 315 nt7.76□□□□□ -1.17
PUB1P32588 MRI1YPR118W 1236 nt7.76□□□□□ -1.17
PUB1P32588 TPO4YOR273C 1980 nt7.75□□□□□ -1.17 RIP-Chip
PUB1P32588 YFR036W-AYFR036W-A 651 nt7.75□□□□□ -1.17
PUB1P32588 PEX34YCL056C 435 nt7.75□□□□□ -1.17
PUB1P32588 FHN1YGR131W 525 nt7.74□□□□□ -1.17 RIP-Chip
PUB1P32588 FAF1YIL019W 1041 nt7.74□□□□□ -1.17
PUB1P32588 snR31snR31 225 nt7.74□□□□□ -1.17
PUB1P32588 ESS1YJR017C 513 nt7.73□□□□□ -1.17 RIP-Chip
PUB1P32588 NPP2YEL016C 1482 nt7.73□□□□□ -1.17
PUB1P32588 YNL040WYNL040W 1371 nt7.72□□□□□ -1.17
PUB1P32588 TVP23YDR084C 600 nt7.72□□□□□ -1.17 RIP-Chip
PUB1P32588 tE(CUC)DtE(CUC)D 72 nt7.72□□□□□ -1.17
PUB1P32588 tE(CUC)ItE(CUC)I 72 nt7.72□□□□□ -1.17
PUB1P32588 tS(GCU)LtS(GCU)L 80 nt7.71□□□□□ -1.18
PUB1P32588 TAF4YMR005W 1167 nt7.71□□□□□ -1.18
PUB1P32588 SNZ1YMR096W 894 nt7.71□□□□□ -1.18
PUB1P32588 CRC1YOR100C 984 nt7.71□□□□□ -1.18
PUB1P32588 YPR126CYPR126C 309 nt7.71□□□□□ -1.18
PUB1P32588 HMG2YLR450W 3138 nt7.71□□□□□ -1.18
PUB1P32588 AME1YBR211C 975 nt7.7□□□□□ -1.18 RIP-Chip
PUB1P32588 SFL1YOR140W 2301 nt7.7□□□□□ -1.18 RIP-Chip
PUB1P32588 SPS100YHR139C 981 nt7.69□□□□□ -1.18
PUB1P32588 YMR074CYMR074C 438 nt7.69□□□□□ -1.18
PUB1P32588 MET1YKR069W 1782 nt7.69□□□□□ -1.18
PUB1P32588 SWT21YNL187W 1074 nt7.68□□□□□ -1.18
PUB1P32588 FET5YFL041W 1869 nt7.68□□□□□ -1.18
PUB1P32588 COX16YJL003W 357 nt7.67□□□□□ -1.18 RIP-Chip
PUB1P32588 GPM1YKL152C 744 nt7.67□□□□□ -1.18 RIP-Chip
PUB1P32588 YBL095WYBL095W 813 nt7.67□□□□□ -1.18
PUB1P32588 TAZ1YPR140W 1146 nt7.67□□□□□ -1.18 RIP-Chip
PUB1P32588 IML3YBR107C 738 nt7.67□□□□□ -1.18
PUB1P32588 CCT5YJR064W 1689 nt7.67□□□□□ -1.18
PUB1P32588 tD(GUC)BtD(GUC)B 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)DtD(GUC)D 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)G1tD(GUC)G1 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)G2tD(GUC)G2 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)I1tD(GUC)I1 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)I2tD(GUC)I2 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)J1tD(GUC)J1 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)J2tD(GUC)J2 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)J3tD(GUC)J3 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)J4tD(GUC)J4 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)KtD(GUC)K 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)L1tD(GUC)L1 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)L2tD(GUC)L2 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)MtD(GUC)M 72 nt7.66□□□□□ -1.18
PUB1P32588 tD(GUC)OtD(GUC)O 72 nt7.66□□□□□ -1.18
PUB1P32588 CTR1YPR124W 1221 nt7.65□□□□□ -1.18
PUB1P32588 CTI6YPL181W 1521 nt7.64□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms