Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 Z99916.2-201ENST00000604037 246 ntBASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 MTDHP1-201ENST00000605323 784 ntBASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 KRT8P36-201ENST00000489121 1440 ntBASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNAP47Q5SQN1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.4■□□□□ 0.7
SNAP47Q5SQN1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNAP47Q5SQN1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNAP47Q5SQN1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 KRASP1-201ENST00000407852 552 ntBASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.39■□□□□ 0.69
SNAP47Q5SQN1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNAP47Q5SQN1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 SNORA78-201ENST00000459373 127 ntBASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms