Protein–RNA interactions for Protein: Q12348

RRI2, COP9 signalosome complex subunit 10, yeastyeast

Predictions only

Length 645 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRI2Q12348 RAD61YDR014W 1944 nt0.56□□□□□ -2.32
RRI2Q12348 tN(GUU)QtN(GUU)Q 71 nt0.56□□□□□ -2.32
RRI2Q12348 FMP27YLR454W 7887 nt0.55□□□□□ -2.32
RRI2Q12348 ULI1YFR026C 510 nt0.55□□□□□ -2.32
RRI2Q12348 YLR120W-AYLR120W-A 102 nt0.55□□□□□ -2.32
RRI2Q12348 SBH1YER087C-B 249 nt0.54□□□□□ -2.32
RRI2Q12348 YOR015WYOR015W 360 nt0.54□□□□□ -2.32
RRI2Q12348 YPR092WYPR092W 306 nt0.54□□□□□ -2.32
RRI2Q12348 YCR022CYCR022C 345 nt0.53□□□□□ -2.32
RRI2Q12348 YOR161W-AYOR161W-A 81 nt0.53□□□□□ -2.32
RRI2Q12348 YOR345CYOR345C 351 nt0.53□□□□□ -2.32
RRI2Q12348 YOR192C-BYOR192C-B 5313 nt0.52□□□□□ -2.33
RRI2Q12348 YOR008C-AYOR008C-A 225 nt0.52□□□□□ -2.33
RRI2Q12348 AI1Q0050 2505 nt0.5□□□□□ -2.33
RRI2Q12348 YDR524W-CYDR524W-C 90 nt0.5□□□□□ -2.33
RRI2Q12348 NNF2YGR089W 2811 nt0.49□□□□□ -2.33
RRI2Q12348 YGL052WYGL052W 306 nt0.49□□□□□ -2.33
RRI2Q12348 YGR069WYGR069W 336 nt0.48□□□□□ -2.33
RRI2Q12348 YSP1YHR155W 3687 nt0.48□□□□□ -2.33
RRI2Q12348 YMR172C-AYMR172C-A 384 nt0.47□□□□□ -2.33
RRI2Q12348 YLR041WYLR041W 321 nt0.45□□□□□ -2.34
RRI2Q12348 YDR366CYDR366C 399 nt0.43□□□□□ -2.34
RRI2Q12348 YHR131W-AYHR131W-A 246 nt0.43□□□□□ -2.34
RRI2Q12348 snR74snR74 88 nt0.42□□□□□ -2.34
RRI2Q12348 YNL277W-AYNL277W-A 189 nt0.42□□□□□ -2.34
RRI2Q12348 YDR371C-AYDR371C-A 105 nt0.41□□□□□ -2.34
RRI2Q12348 COX12YLR038C 252 nt0.41□□□□□ -2.34
RRI2Q12348 SNU13YEL026W 381 nt0.4□□□□□ -2.35
RRI2Q12348 RPS26AYGL189C 360 nt0.4□□□□□ -2.35
RRI2Q12348 YLL006W-AYLL006W-A 177 nt0.4□□□□□ -2.35
RRI2Q12348 YER053C-AYER053C-A 114 nt0.38□□□□□ -2.35
RRI2Q12348 NIP1YMR309C 2439 nt0.37□□□□□ -2.35
RRI2Q12348 BIR1YJR089W 2865 nt0.36□□□□□ -2.35
RRI2Q12348 ABF2YMR072W 552 nt0.36□□□□□ -2.35
RRI2Q12348 YNL146WYNL146W 303 nt0.36□□□□□ -2.35
RRI2Q12348 ORC3YLL004W 1851 nt0.35□□□□□ -2.35
RRI2Q12348 snR65snR65 100 nt0.35□□□□□ -2.35
RRI2Q12348 YIL002W-AYIL002W-A 210 nt0.34□□□□□ -2.36
RRI2Q12348 IQG1YPL242C 4488 nt0.34□□□□□ -2.36
RRI2Q12348 MLP2YIL149C 5040 nt0.34□□□□□ -2.36
RRI2Q12348 UTP8YGR128C 2142 nt0.34□□□□□ -2.36
RRI2Q12348 YCR038W-AYCR038W-A 126 nt0.33□□□□□ -2.36
RRI2Q12348 YPR010C-AYPR010C-A 219 nt0.32□□□□□ -2.36
RRI2Q12348 YIR030W-AYIR030W-A 384 nt0.31□□□□□ -2.36
RRI2Q12348 YER078W-AYER078W-A 165 nt0.3□□□□□ -2.36
RRI2Q12348 YOR186C-AYOR186C-A 210 nt0.28□□□□□ -2.36
RRI2Q12348 YBR072C-AYBR072C-A 162 nt0.28□□□□□ -2.36
RRI2Q12348 YBR182C-AYBR182C-A 195 nt0.28□□□□□ -2.36
RRI2Q12348 YKU70YMR284W 1809 nt0.28□□□□□ -2.36
RRI2Q12348 YLR232WYLR232W 348 nt0.27□□□□□ -2.37
RRI2Q12348 YOL013W-AYOL013W-A 192 nt0.27□□□□□ -2.37
RRI2Q12348 MYO1YHR023W 5787 nt0.27□□□□□ -2.37
RRI2Q12348 RCO1YMR075W 2055 nt0.26□□□□□ -2.37
RRI2Q12348 snR55snR55 98 nt0.25□□□□□ -2.37
RRI2Q12348 snR49snR49 165 nt0.24□□□□□ -2.37
RRI2Q12348 BUL2YML111W 2763 nt0.24□□□□□ -2.37
RRI2Q12348 tF(GAA)QtF(GAA)Q 75 nt0.22□□□□□ -2.37
RRI2Q12348 YML099W-AYML099W-A 330 nt0.21□□□□□ -2.38
RRI2Q12348 APQ12YIL040W 417 nt0.2□□□□□ -2.38
RRI2Q12348 YNL054W-BYNL054W-B 5250 nt0.2□□□□□ -2.38
RRI2Q12348 YER181CYER181C 324 nt0.19□□□□□ -2.38
RRI2Q12348 YPL152W-AYPL152W-A 99 nt0.19□□□□□ -2.38
RRI2Q12348 GLG1YKR058W 1851 nt0.18□□□□□ -2.38
RRI2Q12348 YEL073CYEL073C 324 nt0.17□□□□□ -2.38
RRI2Q12348 Q0142Q0142 177 nt0.17□□□□□ -2.38
RRI2Q12348 YMR158W-BYMR158W-B 321 nt0.17□□□□□ -2.38
RRI2Q12348 YOR231C-AYOR231C-A 201 nt0.17□□□□□ -2.38
RRI2Q12348 CSE1YGL238W 2883 nt0.16□□□□□ -2.38
RRI2Q12348 YBL100W-BYBL100W-B 5313 nt0.16□□□□□ -2.38
RRI2Q12348 TAH1YCR060W 336 nt0.15□□□□□ -2.39
RRI2Q12348 YOL155W-AYOL155W-A 135 nt0.15□□□□□ -2.39
RRI2Q12348 ESP1YGR098C 4893 nt0.15□□□□□ -2.39
RRI2Q12348 YGL041CYGL041C 204 nt0.13□□□□□ -2.39
RRI2Q12348 SDH6YDR379C-A 240 nt0.12□□□□□ -2.39
RRI2Q12348 THO2YNL139C 4794 nt0.12□□□□□ -2.39
RRI2Q12348 YDR544CYDR544C 429 nt0.11□□□□□ -2.39
RRI2Q12348 YBR131C-AYBR131C-A 90 nt0.11□□□□□ -2.39
RRI2Q12348 PRP39YML046W 1890 nt0.1□□□□□ -2.39
RRI2Q12348 YBL039C-AYBL039C-A 84 nt0.07□□□□□ -2.4
RRI2Q12348 YGL188C-AYGL188C-A 141 nt0.06□□□□□ -2.4
RRI2Q12348 COG6YNL041C 2520 nt0.05□□□□□ -2.4
RRI2Q12348 YEL014CYEL014C 306 nt0.04□□□□□ -2.4
RRI2Q12348 YOR302WYOR302W 78 nt0.03□□□□□ -2.4
RRI2Q12348 YBR099CYBR099C 384 nt0.03□□□□□ -2.4
RRI2Q12348 snR45snR45 172 nt0.03□□□□□ -2.4
RRI2Q12348 SOV1YMR066W 2697 nt0.03□□□□□ -2.4
RRI2Q12348 YGL182CYGL182C 324 nt0.02□□□□□ -2.41
RRI2Q12348 YJL182CYJL182C 318 nt0.02□□□□□ -2.41
RRI2Q12348 YNL097C-BYNL097C-B 123 nt0.02□□□□□ -2.41
RRI2Q12348 YOR314W-AYOR314W-A 111 nt-0.02□□□□□ -2.41
RRI2Q12348 snR80snR80 171 nt-0.04□□□□□ -2.42
RRI2Q12348 EST1YLR233C 2100 nt-0.05□□□□□ -2.42
RRI2Q12348 YOR381W-AYOR381W-A 168 nt-0.06□□□□□ -2.42
RRI2Q12348 RPM2YML091C 3609 nt-0.06□□□□□ -2.42
RRI2Q12348 snR128snR128 126 nt-0.08□□□□□ -2.42
RRI2Q12348 YDR210WYDR210W 228 nt-0.12□□□□□ -2.43
RRI2Q12348 YOR170WYOR170W 306 nt-0.12□□□□□ -2.43
RRI2Q12348 snR8snR8 190 nt-0.13□□□□□ -2.43
RRI2Q12348 tM(CAU)Q2tM(CAU)Q2 78 nt-0.16□□□□□ -2.44
RRI2Q12348 snR46snR46 197 nt-0.17□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 21.6 ms