Protein–RNA interactions for Protein: Q07824

TPO1, Polyamine transporter 1, yeastyeast

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPO1Q07824 NUP192YJL039C 5052 nt1.64□□□□□ -2.15
TPO1Q07824 snR190snR190 190 nt1.64□□□□□ -2.15
TPO1Q07824 IRC20YLR247C 4671 nt1.64□□□□□ -2.15
TPO1Q07824 KAP120YPL125W 3099 nt1.63□□□□□ -2.15
TPO1Q07824 MEC1YBR136W 7107 nt1.63□□□□□ -2.15
TPO1Q07824 YDR210WYDR210W 228 nt1.63□□□□□ -2.15
TPO1Q07824 YJL127W-AYJL127W-A 117 nt1.63□□□□□ -2.15
TPO1Q07824 WAR1YML076C 2835 nt1.62□□□□□ -2.15
TPO1Q07824 RPL26BYGR034W 384 nt1.62□□□□□ -2.15
TPO1Q07824 PKH3YDR466W 2697 nt1.62□□□□□ -2.15
TPO1Q07824 YMR247W-AYMR247W-A 144 nt1.61□□□□□ -2.15
TPO1Q07824 ASE1YOR058C 2658 nt1.6□□□□□ -2.15
TPO1Q07824 GEA2YEL022W 4380 nt1.59□□□□□ -2.15
TPO1Q07824 snR81snR81 201 nt1.59□□□□□ -2.15
TPO1Q07824 BIR1YJR089W 2865 nt1.58□□□□□ -2.16
TPO1Q07824 YLL066W-BYLL066W-B 171 nt1.58□□□□□ -2.16
TPO1Q07824 CAT8YMR280C 4302 nt1.58□□□□□ -2.16
TPO1Q07824 YNL266WYNL266W 420 nt1.57□□□□□ -2.16
TPO1Q07824 PMD1YER132C 5262 nt1.57□□□□□ -2.16
TPO1Q07824 SWI4YER111C 3282 nt1.57□□□□□ -2.16
TPO1Q07824 YGR146C-AYGR146C-A 162 nt1.56□□□□□ -2.16
TPO1Q07824 TRM732YMR259C 4263 nt1.55□□□□□ -2.16
TPO1Q07824 SEC1YDR164C 2175 nt1.55□□□□□ -2.16
TPO1Q07824 APL3YBL037W 3078 nt1.55□□□□□ -2.16
TPO1Q07824 YBR072C-AYBR072C-A 162 nt1.55□□□□□ -2.16
TPO1Q07824 snR45snR45 172 nt1.55□□□□□ -2.16
TPO1Q07824 RAD9YDR217C 3930 nt1.55□□□□□ -2.16
TPO1Q07824 CHS1YNL192W 3396 nt1.55□□□□□ -2.16
TPO1Q07824 ROM2YLR371W 4071 nt1.55□□□□□ -2.16
TPO1Q07824 SEC3YER008C 4011 nt1.54□□□□□ -2.16
TPO1Q07824 YAL037C-AYAL037C-A 93 nt1.54□□□□□ -2.16
TPO1Q07824 IRA1YBR140C 9279 nt1.53□□□□□ -2.16
TPO1Q07824 BRR2YER172C 6492 nt1.53□□□□□ -2.16
TPO1Q07824 YBR200W-AYBR200W-A 165 nt1.53□□□□□ -2.16
TPO1Q07824 VPS15YBR097W 4365 nt1.53□□□□□ -2.16
TPO1Q07824 FIG2YCR089W 4830 nt1.52□□□□□ -2.17
TPO1Q07824 RPM2YML091C 3609 nt1.51□□□□□ -2.17
TPO1Q07824 NUP145YGL092W 3954 nt1.5□□□□□ -2.17
TPO1Q07824 NUP188YML103C 4968 nt1.49□□□□□ -2.17
TPO1Q07824 BST1YFL025C 3090 nt1.49□□□□□ -2.17
TPO1Q07824 CDC25YLR310C 4770 nt1.49□□□□□ -2.17
TPO1Q07824 SAC3YDR159W 3906 nt1.49□□□□□ -2.17
TPO1Q07824 CCH1YGR217W 6120 nt1.49□□□□□ -2.17
TPO1Q07824 SEC8YPR055W 3198 nt1.47□□□□□ -2.17
TPO1Q07824 YDL073WYDL073W 2955 nt1.46□□□□□ -2.18
TPO1Q07824 YOL083C-AYOL083C-A 141 nt1.45□□□□□ -2.18
TPO1Q07824 AZF1YOR113W 2745 nt1.45□□□□□ -2.18
TPO1Q07824 PRP16YKR086W 3216 nt1.44□□□□□ -2.18
TPO1Q07824 snR62snR62 100 nt1.44□□□□□ -2.18
TPO1Q07824 SXM1YDR395W 2835 nt1.44□□□□□ -2.18
TPO1Q07824 MSH3YCR092C 3057 nt1.43□□□□□ -2.18
TPO1Q07824 BEM3YPL115C 3387 nt1.43□□□□□ -2.18
TPO1Q07824 tQ(UUG)E2tQ(UUG)E2 72 nt1.43□□□□□ -2.18
TPO1Q07824 SSK2YNR031C 4740 nt1.42□□□□□ -2.18
TPO1Q07824 tN(GUU)QtN(GUU)Q 71 nt1.42□□□□□ -2.18
TPO1Q07824 YLR399W-AYLR399W-A 105 nt1.42□□□□□ -2.18
TPO1Q07824 EST2YLR318W 2655 nt1.42□□□□□ -2.18
TPO1Q07824 PET127YOR017W 2403 nt1.41□□□□□ -2.18
TPO1Q07824 YBL071C-BYBL071C-B 99 nt1.4□□□□□ -2.19
TPO1Q07824 YPR160W-AYPR160W-A 81 nt1.4□□□□□ -2.19
TPO1Q07824 YBR196C-AYBR196C-A 150 nt1.4□□□□□ -2.19
TPO1Q07824 SPC110YDR356W 2835 nt1.4□□□□□ -2.19
TPO1Q07824 CDC39YCR093W 6327 nt1.39□□□□□ -2.19
TPO1Q07824 UBP3YER151C 2739 nt1.39□□□□□ -2.19
TPO1Q07824 NNF2YGR089W 2811 nt1.37□□□□□ -2.19
TPO1Q07824 YSP1YHR155W 3687 nt1.37□□□□□ -2.19
TPO1Q07824 tH(GUG)E1tH(GUG)E1 72 nt1.36□□□□□ -2.19
TPO1Q07824 tH(GUG)E2tH(GUG)E2 72 nt1.36□□□□□ -2.19
TPO1Q07824 tH(GUG)G1tH(GUG)G1 72 nt1.36□□□□□ -2.19
TPO1Q07824 tH(GUG)G2tH(GUG)G2 72 nt1.36□□□□□ -2.19
TPO1Q07824 tH(GUG)HtH(GUG)H 72 nt1.36□□□□□ -2.19
TPO1Q07824 tH(GUG)KtH(GUG)K 72 nt1.36□□□□□ -2.19
TPO1Q07824 tH(GUG)MtH(GUG)M 72 nt1.36□□□□□ -2.19
TPO1Q07824 FYV8YGR196C 2454 nt1.36□□□□□ -2.19
TPO1Q07824 LAA1YJL207C 6045 nt1.35□□□□□ -2.19
TPO1Q07824 SEC10YLR166C 2616 nt1.34□□□□□ -2.19
TPO1Q07824 PIK1YNL267W 3201 nt1.34□□□□□ -2.2
TPO1Q07824 RPS26AYGL189C 360 nt1.33□□□□□ -2.2
TPO1Q07824 YGR130CYGR130C 2451 nt1.33□□□□□ -2.2
TPO1Q07824 MSN5YDR335W 3675 nt1.33□□□□□ -2.2
TPO1Q07824 GLG1YKR058W 1851 nt1.32□□□□□ -2.2
TPO1Q07824 HKR1YDR420W 5409 nt1.32□□□□□ -2.2
TPO1Q07824 ULP2YIL031W 3105 nt1.31□□□□□ -2.2
TPO1Q07824 CLU1YMR012W 3834 nt1.31□□□□□ -2.2
TPO1Q07824 YBL100W-CYBL100W-C 120 nt1.31□□□□□ -2.2
TPO1Q07824 YDR034C-AYDR034C-A 177 nt1.29□□□□□ -2.2
TPO1Q07824 YOL164W-AYOL164W-A 183 nt1.29□□□□□ -2.2
TPO1Q07824 YLR286W-AYLR286W-A 135 nt1.27□□□□□ -2.21
TPO1Q07824 IML1YJR138W 4755 nt1.25□□□□□ -2.21
TPO1Q07824 YGR240C-AYGR240C-A 201 nt1.25□□□□□ -2.21
TPO1Q07824 tD(GUC)QtD(GUC)Q 75 nt1.23□□□□□ -2.21
TPO1Q07824 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
TPO1Q07824 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
TPO1Q07824 EST1YLR233C 2100 nt1.2□□□□□ -2.22
TPO1Q07824 HUG1YML058W-A 207 nt1.2□□□□□ -2.22
TPO1Q07824 SPT7YBR081C 3999 nt1.19□□□□□ -2.22
TPO1Q07824 SIP4YJL089W 2490 nt1.18□□□□□ -2.22
TPO1Q07824 CSE1YGL238W 2883 nt1.18□□□□□ -2.22
TPO1Q07824 snR69snR69 101 nt1.18□□□□□ -2.22
TPO1Q07824 YLL006W-AYLL006W-A 177 nt1.18□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms