Protein–RNA interactions for Protein: Q07500

NDE2, External NADH-ubiquinone oxidoreductase 2, mitochondrial, yeastyeast

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE2Q07500 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
NDE2Q07500 FYV10YIL097W 1551 nt0.74□□□□□ -2.29
NDE2Q07500 YEL014CYEL014C 306 nt0.73□□□□□ -2.29
NDE2Q07500 YIL002W-AYIL002W-A 210 nt0.73□□□□□ -2.29
NDE2Q07500 COX5BYIL111W 456 nt0.73□□□□□ -2.29
NDE2Q07500 YLR041WYLR041W 321 nt0.72□□□□□ -2.29
NDE2Q07500 YJL182CYJL182C 318 nt0.71□□□□□ -2.3
NDE2Q07500 BLI1YKL061W 342 nt0.71□□□□□ -2.3
NDE2Q07500 PAU24YBR301W 363 nt0.71□□□□□ -2.3
NDE2Q07500 SEC8YPR055W 3198 nt0.7□□□□□ -2.3
NDE2Q07500 FMP27YLR454W 7887 nt0.7□□□□□ -2.3
NDE2Q07500 YML002WYML002W 2214 nt0.69□□□□□ -2.3
NDE2Q07500 PRP39YML046W 1890 nt0.69□□□□□ -2.3
NDE2Q07500 OST4YDL232W 111 nt0.68□□□□□ -2.3
NDE2Q07500 YLR399W-AYLR399W-A 105 nt0.67□□□□□ -2.3
NDE2Q07500 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
NDE2Q07500 snR46snR46 197 nt0.67□□□□□ -2.3
NDE2Q07500 YJL150WYJL150W 303 nt0.66□□□□□ -2.3
NDE2Q07500 SEC1YDR164C 2175 nt0.66□□□□□ -2.3
NDE2Q07500 PRP42YDR235W 1635 nt0.65□□□□□ -2.31
NDE2Q07500 YMR046W-AYMR046W-A 129 nt0.65□□□□□ -2.31
NDE2Q07500 YPR159C-AYPR159C-A 102 nt0.65□□□□□ -2.31
NDE2Q07500 snR52snR52 92 nt0.65□□□□□ -2.31
NDE2Q07500 YOR192C-BYOR192C-B 5313 nt0.64□□□□□ -2.31
NDE2Q07500 YDR406W-AYDR406W-A 246 nt0.62□□□□□ -2.31
NDE2Q07500 YKL100W-AYKL100W-A 90 nt0.62□□□□□ -2.31
NDE2Q07500 tM(CAU)Q1tM(CAU)Q1 76 nt0.61□□□□□ -2.31
NDE2Q07500 YHR131W-AYHR131W-A 246 nt0.61□□□□□ -2.31
NDE2Q07500 YNL198CYNL198C 303 nt0.61□□□□□ -2.31
NDE2Q07500 YJL127W-AYJL127W-A 117 nt0.6□□□□□ -2.31
NDE2Q07500 YBL039C-AYBL039C-A 84 nt0.6□□□□□ -2.31
NDE2Q07500 TAH1YCR060W 336 nt0.59□□□□□ -2.31
NDE2Q07500 YSP1YHR155W 3687 nt0.59□□□□□ -2.32
NDE2Q07500 YDR544CYDR544C 429 nt0.58□□□□□ -2.32
NDE2Q07500 SNU13YEL026W 381 nt0.58□□□□□ -2.32
NDE2Q07500 STF2YGR008C 255 nt0.58□□□□□ -2.32
NDE2Q07500 TRS65YGR166W 1683 nt0.58□□□□□ -2.32
NDE2Q07500 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
NDE2Q07500 UTP8YGR128C 2142 nt0.57□□□□□ -2.32
NDE2Q07500 YGL182CYGL182C 324 nt0.56□□□□□ -2.32
NDE2Q07500 YMR160WYMR160W 2451 nt0.56□□□□□ -2.32
NDE2Q07500 BUL2YML111W 2763 nt0.56□□□□□ -2.32
NDE2Q07500 PAU12YGR294W 363 nt0.55□□□□□ -2.32
NDE2Q07500 HUG1YML058W-A 207 nt0.55□□□□□ -2.32
NDE2Q07500 YIL142C-AYIL142C-A 333 nt0.54□□□□□ -2.32
NDE2Q07500 YLR232WYLR232W 348 nt0.54□□□□□ -2.32
NDE2Q07500 YEL073CYEL073C 324 nt0.53□□□□□ -2.32
NDE2Q07500 YOR381W-AYOR381W-A 168 nt0.53□□□□□ -2.32
NDE2Q07500 YLR342W-AYLR342W-A 174 nt0.52□□□□□ -2.33
NDE2Q07500 BIR1YJR089W 2865 nt0.52□□□□□ -2.33
NDE2Q07500 NNF2YGR089W 2811 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)BtT(AGU)B 73 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)CtT(AGU)C 73 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)DtT(AGU)D 73 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)HtT(AGU)H 73 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)I1tT(AGU)I1 73 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)I2tT(AGU)I2 73 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)JtT(AGU)J 73 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)N1tT(AGU)N1 73 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)N2tT(AGU)N2 73 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)O1tT(AGU)O1 73 nt0.51□□□□□ -2.33
NDE2Q07500 tT(AGU)O2tT(AGU)O2 73 nt0.51□□□□□ -2.33
NDE2Q07500 BEM3YPL115C 3387 nt0.51□□□□□ -2.33
NDE2Q07500 YLR466C-BYLR466C-B 117 nt0.5□□□□□ -2.33
NDE2Q07500 YBL053WYBL053W 375 nt0.5□□□□□ -2.33
NDE2Q07500 YDR371C-AYDR371C-A 105 nt0.49□□□□□ -2.33
NDE2Q07500 SDH6YDR379C-A 240 nt0.49□□□□□ -2.33
NDE2Q07500 RPS26AYGL189C 360 nt0.49□□□□□ -2.33
NDE2Q07500 PET111YMR257C 2403 nt0.49□□□□□ -2.33
NDE2Q07500 ORC3YLL004W 1851 nt0.48□□□□□ -2.33
NDE2Q07500 YLL006W-AYLL006W-A 177 nt0.48□□□□□ -2.33
NDE2Q07500 YBR072C-AYBR072C-A 162 nt0.48□□□□□ -2.33
NDE2Q07500 NIP1YMR309C 2439 nt0.47□□□□□ -2.33
NDE2Q07500 SBH1YER087C-B 249 nt0.47□□□□□ -2.33
NDE2Q07500 COG6YNL041C 2520 nt0.46□□□□□ -2.34
NDE2Q07500 YNL337WYNL337W 255 nt0.45□□□□□ -2.34
NDE2Q07500 YOR170WYOR170W 306 nt0.45□□□□□ -2.34
NDE2Q07500 snR39BsnR39B 96 nt0.45□□□□□ -2.34
NDE2Q07500 ESP1YGR098C 4893 nt0.44□□□□□ -2.34
NDE2Q07500 tL(UAA)QtL(UAA)Q 85 nt0.44□□□□□ -2.34
NDE2Q07500 YGR151CYGR151C 336 nt0.44□□□□□ -2.34
NDE2Q07500 YOR314W-AYOR314W-A 111 nt0.44□□□□□ -2.34
NDE2Q07500 YOR329W-AYOR329W-A 210 nt0.44□□□□□ -2.34
NDE2Q07500 YPL060C-AYPL060C-A 3315 nt0.43□□□□□ -2.34
NDE2Q07500 YKL145W-AYKL145W-A 93 nt0.42□□□□□ -2.34
NDE2Q07500 YNL338WYNL338W 159 nt0.42□□□□□ -2.34
NDE2Q07500 snR48snR48 113 nt0.42□□□□□ -2.34
NDE2Q07500 THO2YNL139C 4794 nt0.42□□□□□ -2.34
NDE2Q07500 RCO1YMR075W 2055 nt0.41□□□□□ -2.34
NDE2Q07500 ULP2YIL031W 3105 nt0.41□□□□□ -2.34
NDE2Q07500 tF(GAA)BtF(GAA)B 73 nt0.4□□□□□ -2.35
NDE2Q07500 tF(GAA)FtF(GAA)F 73 nt0.4□□□□□ -2.35
NDE2Q07500 tF(GAA)GtF(GAA)G 73 nt0.4□□□□□ -2.35
NDE2Q07500 tF(GAA)H1tF(GAA)H1 73 nt0.4□□□□□ -2.35
NDE2Q07500 tF(GAA)H2tF(GAA)H2 73 nt0.4□□□□□ -2.35
NDE2Q07500 tF(GAA)MtF(GAA)M 73 nt0.4□□□□□ -2.35
NDE2Q07500 tF(GAA)P1tF(GAA)P1 73 nt0.4□□□□□ -2.35
NDE2Q07500 tF(GAA)P2tF(GAA)P2 73 nt0.4□□□□□ -2.35
NDE2Q07500 YGL007C-AYGL007C-A 87 nt0.4□□□□□ -2.35
NDE2Q07500 GLG1YKR058W 1851 nt0.39□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms