Protein–RNA interactions for Protein: Q06224

YSH1, Endoribonuclease YSH1, yeastyeast

Predicted RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YSH1Q06224 CDC25YLR310C 4770 nt1.39□□□□□ -2.19
YSH1Q06224 CHS6YJL099W 2241 nt1.38□□□□□ -2.19
YSH1Q06224 TAH1YCR060W 336 nt1.38□□□□□ -2.19
YSH1Q06224 YBR200W-AYBR200W-A 165 nt1.38□□□□□ -2.19
YSH1Q06224 LAA1YJL207C 6045 nt1.38□□□□□ -2.19
YSH1Q06224 SEC3YER008C 4011 nt1.37□□□□□ -2.19
YSH1Q06224 EST2YLR318W 2655 nt1.37□□□□□ -2.19
YSH1Q06224 AZF1YOR113W 2745 nt1.37□□□□□ -2.19
YSH1Q06224 snR190snR190 190 nt1.37□□□□□ -2.19
YSH1Q06224 tH(GUG)E1tH(GUG)E1 72 nt1.36□□□□□ -2.19
YSH1Q06224 tH(GUG)E2tH(GUG)E2 72 nt1.36□□□□□ -2.19
YSH1Q06224 tH(GUG)G1tH(GUG)G1 72 nt1.36□□□□□ -2.19
YSH1Q06224 tH(GUG)G2tH(GUG)G2 72 nt1.36□□□□□ -2.19
YSH1Q06224 tH(GUG)HtH(GUG)H 72 nt1.36□□□□□ -2.19
YSH1Q06224 tH(GUG)KtH(GUG)K 72 nt1.36□□□□□ -2.19
YSH1Q06224 tH(GUG)MtH(GUG)M 72 nt1.36□□□□□ -2.19
YSH1Q06224 NUP145YGL092W 3954 nt1.36□□□□□ -2.19
YSH1Q06224 RPL26BYGR034W 384 nt1.36□□□□□ -2.19
YSH1Q06224 YLR041WYLR041W 321 nt1.36□□□□□ -2.19
YSH1Q06224 YOR329W-AYOR329W-A 210 nt1.36□□□□□ -2.19
YSH1Q06224 MSN5YDR335W 3675 nt1.36□□□□□ -2.19
YSH1Q06224 FYV10YIL097W 1551 nt1.35□□□□□ -2.19
YSH1Q06224 YNL284C-BYNL284C-B 5268 nt1.35□□□□□ -2.19
YSH1Q06224 STF2YGR008C 255 nt1.33□□□□□ -2.2
YSH1Q06224 IML1YJR138W 4755 nt1.33□□□□□ -2.2
YSH1Q06224 NST1YNL091W 3723 nt1.33□□□□□ -2.2
YSH1Q06224 HUG1YML058W-A 207 nt1.32□□□□□ -2.2
YSH1Q06224 OST4YDL232W 111 nt1.31□□□□□ -2.2
YSH1Q06224 YIL071W-AYIL071W-A 477 nt1.31□□□□□ -2.2
YSH1Q06224 QCR9YGR183C 201 nt1.3□□□□□ -2.2
YSH1Q06224 YNL067W-BYNL067W-B 141 nt1.3□□□□□ -2.2
YSH1Q06224 snR39BsnR39B 96 nt1.3□□□□□ -2.2
YSH1Q06224 YLR232WYLR232W 348 nt1.28□□□□□ -2.2
YSH1Q06224 YCR095W-AYCR095W-A 159 nt1.27□□□□□ -2.21
YSH1Q06224 tV(UAC)BtV(UAC)B 74 nt1.27□□□□□ -2.21
YSH1Q06224 tV(UAC)DtV(UAC)D 74 nt1.27□□□□□ -2.21
YSH1Q06224 YBR099CYBR099C 384 nt1.27□□□□□ -2.21
YSH1Q06224 VAM6YDL077C 3150 nt1.27□□□□□ -2.21
YSH1Q06224 KAP120YPL125W 3099 nt1.26□□□□□ -2.21
YSH1Q06224 YHR131W-AYHR131W-A 246 nt1.26□□□□□ -2.21
YSH1Q06224 YDR544CYDR544C 429 nt1.25□□□□□ -2.21
YSH1Q06224 SOM1YEL059C-A 225 nt1.24□□□□□ -2.21
YSH1Q06224 ROM2YLR371W 4071 nt1.23□□□□□ -2.21
YSH1Q06224 SEC8YPR055W 3198 nt1.23□□□□□ -2.21
YSH1Q06224 PRP16YKR086W 3216 nt1.21□□□□□ -2.22
YSH1Q06224 SIP4YJL089W 2490 nt1.21□□□□□ -2.22
YSH1Q06224 tM(CAU)Q2tM(CAU)Q2 78 nt1.21□□□□□ -2.22
YSH1Q06224 COG6YNL041C 2520 nt1.2□□□□□ -2.22
YSH1Q06224 PMP2YEL017C-A 132 nt1.2□□□□□ -2.22
YSH1Q06224 tN(GUU)QtN(GUU)Q 71 nt1.2□□□□□ -2.22
YSH1Q06224 YNL103W-AYNL103W-A 90 nt1.19□□□□□ -2.22
YSH1Q06224 YPR160W-AYPR160W-A 81 nt1.19□□□□□ -2.22
YSH1Q06224 CLU1YMR012W 3834 nt1.18□□□□□ -2.22
YSH1Q06224 YLR399W-AYLR399W-A 105 nt1.18□□□□□ -2.22
YSH1Q06224 YDR210WYDR210W 228 nt1.17□□□□□ -2.22
YSH1Q06224 EMT1tM(CAU)D 73 nt1.17□□□□□ -2.22
YSH1Q06224 EMT5tM(CAU)J1 73 nt1.17□□□□□ -2.22
YSH1Q06224 EMT3tM(CAU)J2 73 nt1.17□□□□□ -2.22
YSH1Q06224 EMT4tM(CAU)M 73 nt1.17□□□□□ -2.22
YSH1Q06224 EMT2tM(CAU)O2 73 nt1.17□□□□□ -2.22
YSH1Q06224 SEC1YDR164C 2175 nt1.15□□□□□ -2.23
YSH1Q06224 SCC2YDR180W 4482 nt1.15□□□□□ -2.23
YSH1Q06224 TFB5YDR079C-A 219 nt1.14□□□□□ -2.23
YSH1Q06224 YDR524C-AYDR524C-A 120 nt1.14□□□□□ -2.23
YSH1Q06224 YJR029WYJR029W 5268 nt1.13□□□□□ -2.23
YSH1Q06224 YPR137C-BYPR137C-B 5268 nt1.13□□□□□ -2.23
YSH1Q06224 YJL127W-AYJL127W-A 117 nt1.13□□□□□ -2.23
YSH1Q06224 YBL109WYBL109W 336 nt1.13□□□□□ -2.23
YSH1Q06224 YDL073WYDL073W 2955 nt1.12□□□□□ -2.23
YSH1Q06224 SPT7YBR081C 3999 nt1.12□□□□□ -2.23
YSH1Q06224 BUD3YCL014W 4911 nt1.12□□□□□ -2.23
YSH1Q06224 RCO1YMR075W 2055 nt1.1□□□□□ -2.23
YSH1Q06224 BEM3YPL115C 3387 nt1.09□□□□□ -2.23
YSH1Q06224 YGR146C-AYGR146C-A 162 nt1.09□□□□□ -2.23
YSH1Q06224 YBR178WYBR178W 375 nt1.09□□□□□ -2.23
YSH1Q06224 snR61snR61 90 nt1.08□□□□□ -2.24
YSH1Q06224 YSP1YHR155W 3687 nt1.08□□□□□ -2.24
YSH1Q06224 YMR326CYMR326C 309 nt1.07□□□□□ -2.24
YSH1Q06224 RPM2YML091C 3609 nt1.07□□□□□ -2.24
YSH1Q06224 BIR1YJR089W 2865 nt1.05□□□□□ -2.24
YSH1Q06224 DOP1YDR141C 5097 nt1.05□□□□□ -2.24
YSH1Q06224 RKR1YMR247C 4689 nt1.05□□□□□ -2.24
YSH1Q06224 BEM2YER155C 6504 nt1.05□□□□□ -2.24
YSH1Q06224 UBP3YER151C 2739 nt1.04□□□□□ -2.24
YSH1Q06224 YBR072C-AYBR072C-A 162 nt1.03□□□□□ -2.24
YSH1Q06224 ULP2YIL031W 3105 nt1.01□□□□□ -2.25
YSH1Q06224 NNF2YGR089W 2811 nt1.01□□□□□ -2.25
YSH1Q06224 YNL266WYNL266W 420 nt1□□□□□ -2.25
YSH1Q06224 GLG1YKR058W 1851 nt1□□□□□ -2.25
YSH1Q06224 YHR217CYHR217C 462 nt0.98□□□□□ -2.25
YSH1Q06224 YGL041C-BYGL041C-B 183 nt0.97□□□□□ -2.25
YSH1Q06224 YLL006W-AYLL006W-A 177 nt0.95□□□□□ -2.26
YSH1Q06224 MYO1YHR023W 5787 nt0.95□□□□□ -2.26
YSH1Q06224 YPR117WYPR117W 7470 nt0.93□□□□□ -2.26
YSH1Q06224 SBH1YER087C-B 249 nt0.92□□□□□ -2.26
YSH1Q06224 YIL142C-AYIL142C-A 333 nt0.9□□□□□ -2.27
YSH1Q06224 PAU24YBR301W 363 nt0.9□□□□□ -2.27
YSH1Q06224 YPL060C-AYPL060C-A 3315 nt0.9□□□□□ -2.27
YSH1Q06224 BUL2YML111W 2763 nt0.89□□□□□ -2.27
YSH1Q06224 YOR192C-BYOR192C-B 5313 nt0.89□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 1434.1 ms