Protein–RNA interactions for Protein: Q05948

YLR225C, Uncharacterized SVF1-like protein YLR225C, yeastyeast

Known RBP Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR225CQ05948 RTP1YMR185W 2946 nt1.66□□□□□ -2.14
YLR225CQ05948 tT(UGU)HtT(UGU)H 72 nt1.66□□□□□ -2.14
YLR225CQ05948 snR190snR190 190 nt1.65□□□□□ -2.15
YLR225CQ05948 YLR419WYLR419W 4308 nt1.65□□□□□ -2.15
YLR225CQ05948 TAH1YCR060W 336 nt1.64□□□□□ -2.15
YLR225CQ05948 YMR247W-AYMR247W-A 144 nt1.64□□□□□ -2.15
YLR225CQ05948 RAD9YDR217C 3930 nt1.63□□□□□ -2.15
YLR225CQ05948 NUP157YER105C 4176 nt1.62□□□□□ -2.15
YLR225CQ05948 YCR095W-AYCR095W-A 159 nt1.62□□□□□ -2.15
YLR225CQ05948 STB6YKL072W 2301 nt1.61□□□□□ -2.15
YLR225CQ05948 FYV10YIL097W 1551 nt1.61□□□□□ -2.15
YLR225CQ05948 OST4YDL232W 111 nt1.61□□□□□ -2.15
YLR225CQ05948 TRM732YMR259C 4263 nt1.6□□□□□ -2.15
YLR225CQ05948 SEC21YNL287W 2808 nt1.6□□□□□ -2.15
YLR225CQ05948 SEC8YPR055W 3198 nt1.59□□□□□ -2.15
YLR225CQ05948 QCR9YGR183C 201 nt1.59□□□□□ -2.15
YLR225CQ05948 YLR232WYLR232W 348 nt1.59□□□□□ -2.15
YLR225CQ05948 YOR329W-AYOR329W-A 210 nt1.59□□□□□ -2.15
YLR225CQ05948 ASE1YOR058C 2658 nt1.59□□□□□ -2.16
YLR225CQ05948 NUP188YML103C 4968 nt1.58□□□□□ -2.16
YLR225CQ05948 tH(GUG)E1tH(GUG)E1 72 nt1.57□□□□□ -2.16
YLR225CQ05948 tH(GUG)E2tH(GUG)E2 72 nt1.57□□□□□ -2.16
YLR225CQ05948 tH(GUG)G1tH(GUG)G1 72 nt1.57□□□□□ -2.16
YLR225CQ05948 tH(GUG)G2tH(GUG)G2 72 nt1.57□□□□□ -2.16
YLR225CQ05948 tH(GUG)HtH(GUG)H 72 nt1.57□□□□□ -2.16
YLR225CQ05948 tH(GUG)KtH(GUG)K 72 nt1.57□□□□□ -2.16
YLR225CQ05948 tH(GUG)MtH(GUG)M 72 nt1.57□□□□□ -2.16
YLR225CQ05948 YNL067W-BYNL067W-B 141 nt1.57□□□□□ -2.16
YLR225CQ05948 YBR099CYBR099C 384 nt1.57□□□□□ -2.16
YLR225CQ05948 KAP120YPL125W 3099 nt1.55□□□□□ -2.16
YLR225CQ05948 GEA2YEL022W 4380 nt1.55□□□□□ -2.16
YLR225CQ05948 SOM1YEL059C-A 225 nt1.55□□□□□ -2.16
YLR225CQ05948 tM(CAU)Q2tM(CAU)Q2 78 nt1.54□□□□□ -2.16
YLR225CQ05948 YLR399W-AYLR399W-A 105 nt1.54□□□□□ -2.16
YLR225CQ05948 PRP16YKR086W 3216 nt1.54□□□□□ -2.16
YLR225CQ05948 YHR131W-AYHR131W-A 246 nt1.51□□□□□ -2.17
YLR225CQ05948 tV(UAC)BtV(UAC)B 74 nt1.5□□□□□ -2.17
YLR225CQ05948 tV(UAC)DtV(UAC)D 74 nt1.5□□□□□ -2.17
YLR225CQ05948 YNL284C-BYNL284C-B 5268 nt1.49□□□□□ -2.17
YLR225CQ05948 YIL071W-AYIL071W-A 477 nt1.48□□□□□ -2.17
YLR225CQ05948 tF(GAA)BtF(GAA)B 73 nt1.47□□□□□ -2.17
YLR225CQ05948 tF(GAA)FtF(GAA)F 73 nt1.47□□□□□ -2.17
YLR225CQ05948 tF(GAA)GtF(GAA)G 73 nt1.47□□□□□ -2.17
YLR225CQ05948 tF(GAA)H1tF(GAA)H1 73 nt1.47□□□□□ -2.17
YLR225CQ05948 tF(GAA)H2tF(GAA)H2 73 nt1.47□□□□□ -2.17
YLR225CQ05948 tF(GAA)MtF(GAA)M 73 nt1.47□□□□□ -2.17
YLR225CQ05948 tF(GAA)P1tF(GAA)P1 73 nt1.47□□□□□ -2.17
YLR225CQ05948 tF(GAA)P2tF(GAA)P2 73 nt1.47□□□□□ -2.17
YLR225CQ05948 YPR160W-AYPR160W-A 81 nt1.47□□□□□ -2.17
YLR225CQ05948 snR39BsnR39B 96 nt1.47□□□□□ -2.17
YLR225CQ05948 SPC110YDR356W 2835 nt1.47□□□□□ -2.17
YLR225CQ05948 YSP1YHR155W 3687 nt1.45□□□□□ -2.18
YLR225CQ05948 CDC39YCR093W 6327 nt1.44□□□□□ -2.18
YLR225CQ05948 FYV8YGR196C 2454 nt1.44□□□□□ -2.18
YLR225CQ05948 BEM3YPL115C 3387 nt1.43□□□□□ -2.18
YLR225CQ05948 PMP2YEL017C-A 132 nt1.42□□□□□ -2.18
YLR225CQ05948 YDR524C-AYDR524C-A 120 nt1.41□□□□□ -2.18
YLR225CQ05948 YBR178WYBR178W 375 nt1.41□□□□□ -2.18
YLR225CQ05948 COG6YNL041C 2520 nt1.41□□□□□ -2.18
YLR225CQ05948 SIP4YJL089W 2490 nt1.41□□□□□ -2.18
YLR225CQ05948 YDR544CYDR544C 429 nt1.4□□□□□ -2.19
YLR225CQ05948 YGR146C-AYGR146C-A 162 nt1.39□□□□□ -2.19
YLR225CQ05948 YJL127W-AYJL127W-A 117 nt1.39□□□□□ -2.19
YLR225CQ05948 IRA1YBR140C 9279 nt1.38□□□□□ -2.19
YLR225CQ05948 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
YLR225CQ05948 UTP20YBL004W 7482 nt1.37□□□□□ -2.19
YLR225CQ05948 snR61snR61 90 nt1.37□□□□□ -2.19
YLR225CQ05948 YDR210WYDR210W 228 nt1.37□□□□□ -2.19
YLR225CQ05948 UBP3YER151C 2739 nt1.37□□□□□ -2.19
YLR225CQ05948 TFB5YDR079C-A 219 nt1.36□□□□□ -2.19
YLR225CQ05948 YMR326CYMR326C 309 nt1.36□□□□□ -2.19
YLR225CQ05948 PET127YOR017W 2403 nt1.35□□□□□ -2.19
YLR225CQ05948 YDL073WYDL073W 2955 nt1.35□□□□□ -2.19
YLR225CQ05948 tN(GUU)QtN(GUU)Q 71 nt1.35□□□□□ -2.19
YLR225CQ05948 ULP2YIL031W 3105 nt1.34□□□□□ -2.2
YLR225CQ05948 YNL103W-AYNL103W-A 90 nt1.33□□□□□ -2.2
YLR225CQ05948 tQ(UUG)E2tQ(UUG)E2 72 nt1.32□□□□□ -2.2
YLR225CQ05948 YBL109WYBL109W 336 nt1.32□□□□□ -2.2
YLR225CQ05948 DOP1YDR141C 5097 nt1.32□□□□□ -2.2
YLR225CQ05948 SEC1YDR164C 2175 nt1.31□□□□□ -2.2
YLR225CQ05948 GLG1YKR058W 1851 nt1.31□□□□□ -2.2
YLR225CQ05948 BIR1YJR089W 2865 nt1.28□□□□□ -2.2
YLR225CQ05948 SBH1YER087C-B 249 nt1.27□□□□□ -2.21
YLR225CQ05948 YOL014WYOL014W 375 nt1.27□□□□□ -2.21
YLR225CQ05948 YHR217CYHR217C 462 nt1.26□□□□□ -2.21
YLR225CQ05948 YBR072C-AYBR072C-A 162 nt1.26□□□□□ -2.21
YLR225CQ05948 BUD3YCL014W 4911 nt1.25□□□□□ -2.21
YLR225CQ05948 NST1YNL091W 3723 nt1.24□□□□□ -2.21
YLR225CQ05948 LTE1YAL024C 4308 nt1.24□□□□□ -2.21
YLR225CQ05948 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
YLR225CQ05948 YNL266WYNL266W 420 nt1.23□□□□□ -2.21
YLR225CQ05948 SCC2YDR180W 4482 nt1.22□□□□□ -2.21
YLR225CQ05948 YGL041C-BYGL041C-B 183 nt1.19□□□□□ -2.22
YLR225CQ05948 YIL142C-AYIL142C-A 333 nt1.17□□□□□ -2.22
YLR225CQ05948 RCO1YMR075W 2055 nt1.17□□□□□ -2.22
YLR225CQ05948 NNF2YGR089W 2811 nt1.16□□□□□ -2.22
YLR225CQ05948 YLL006W-AYLL006W-A 177 nt1.14□□□□□ -2.23
YLR225CQ05948 YPR117WYPR117W 7470 nt1.11□□□□□ -2.23
YLR225CQ05948 YMR160WYMR160W 2451 nt1.1□□□□□ -2.23
YLR225CQ05948 YBR196C-AYBR196C-A 150 nt1.09□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 123.6 ms