Protein–RNA interactions for Protein: Q04602

VBA4, Vacuolar basic amino acid transporter 4, yeastyeast

Known RBP Predictions only

Length 768 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA4Q04602 FYV8YGR196C 2454 nt1.32□□□□□ -2.2
VBA4Q04602 YBL039C-AYBL039C-A 84 nt1.32□□□□□ -2.2
VBA4Q04602 tL(UAA)QtL(UAA)Q 85 nt1.31□□□□□ -2.2
VBA4Q04602 YOR314W-AYOR314W-A 111 nt1.31□□□□□ -2.2
VBA4Q04602 MSH3YCR092C 3057 nt1.31□□□□□ -2.2
VBA4Q04602 FYV10YIL097W 1551 nt1.3□□□□□ -2.2
VBA4Q04602 PIK1YNL267W 3201 nt1.3□□□□□ -2.2
VBA4Q04602 TAH1YCR060W 336 nt1.28□□□□□ -2.2
VBA4Q04602 YIL020C-AYIL020C-A 339 nt1.28□□□□□ -2.2
VBA4Q04602 PRP16YKR086W 3216 nt1.27□□□□□ -2.21
VBA4Q04602 RAD9YDR217C 3930 nt1.26□□□□□ -2.21
VBA4Q04602 CHS6YJL099W 2241 nt1.25□□□□□ -2.21
VBA4Q04602 SEC8YPR055W 3198 nt1.25□□□□□ -2.21
VBA4Q04602 LAA1YJL207C 6045 nt1.25□□□□□ -2.21
VBA4Q04602 NST1YNL091W 3723 nt1.23□□□□□ -2.21
VBA4Q04602 YPR160W-AYPR160W-A 81 nt1.22□□□□□ -2.21
VBA4Q04602 YLR232WYLR232W 348 nt1.21□□□□□ -2.22
VBA4Q04602 YLR399W-AYLR399W-A 105 nt1.21□□□□□ -2.22
VBA4Q04602 YOR329W-AYOR329W-A 210 nt1.21□□□□□ -2.22
VBA4Q04602 Q0143Q0143 153 nt1.19□□□□□ -2.22
VBA4Q04602 YHR131W-AYHR131W-A 246 nt1.19□□□□□ -2.22
VBA4Q04602 tN(GUU)QtN(GUU)Q 71 nt1.18□□□□□ -2.22
VBA4Q04602 tH(GUG)E1tH(GUG)E1 72 nt1.17□□□□□ -2.22
VBA4Q04602 tH(GUG)E2tH(GUG)E2 72 nt1.17□□□□□ -2.22
VBA4Q04602 tH(GUG)G1tH(GUG)G1 72 nt1.17□□□□□ -2.22
VBA4Q04602 tH(GUG)G2tH(GUG)G2 72 nt1.17□□□□□ -2.22
VBA4Q04602 tH(GUG)HtH(GUG)H 72 nt1.17□□□□□ -2.22
VBA4Q04602 tH(GUG)KtH(GUG)K 72 nt1.17□□□□□ -2.22
VBA4Q04602 tH(GUG)MtH(GUG)M 72 nt1.17□□□□□ -2.22
VBA4Q04602 YCL001W-BYCL001W-B 255 nt1.17□□□□□ -2.22
VBA4Q04602 snR39BsnR39B 96 nt1.16□□□□□ -2.22
VBA4Q04602 YDR544CYDR544C 429 nt1.14□□□□□ -2.23
VBA4Q04602 QCR9YGR183C 201 nt1.14□□□□□ -2.23
VBA4Q04602 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
VBA4Q04602 YNL067W-BYNL067W-B 141 nt1.13□□□□□ -2.23
VBA4Q04602 YGR130CYGR130C 2451 nt1.12□□□□□ -2.23
VBA4Q04602 IML1YJR138W 4755 nt1.11□□□□□ -2.23
VBA4Q04602 YNL284C-BYNL284C-B 5268 nt1.11□□□□□ -2.23
VBA4Q04602 RPM2YML091C 3609 nt1.11□□□□□ -2.23
VBA4Q04602 OST4YDL232W 111 nt1.11□□□□□ -2.23
VBA4Q04602 YDL073WYDL073W 2955 nt1.1□□□□□ -2.23
VBA4Q04602 YIL071W-AYIL071W-A 477 nt1.1□□□□□ -2.23
VBA4Q04602 tM(CAU)Q2tM(CAU)Q2 78 nt1.09□□□□□ -2.23
VBA4Q04602 BUD3YCL014W 4911 nt1.09□□□□□ -2.24
VBA4Q04602 YSP1YHR155W 3687 nt1.08□□□□□ -2.24
VBA4Q04602 COG6YNL041C 2520 nt1.08□□□□□ -2.24
VBA4Q04602 SEC1YDR164C 2175 nt1.06□□□□□ -2.24
VBA4Q04602 YCR095W-AYCR095W-A 159 nt1.06□□□□□ -2.24
VBA4Q04602 BEM3YPL115C 3387 nt1.05□□□□□ -2.24
VBA4Q04602 YDR210WYDR210W 228 nt1.05□□□□□ -2.24
VBA4Q04602 tV(UAC)BtV(UAC)B 74 nt1.05□□□□□ -2.24
VBA4Q04602 tV(UAC)DtV(UAC)D 74 nt1.05□□□□□ -2.24
VBA4Q04602 RKR1YMR247C 4689 nt1.05□□□□□ -2.24
VBA4Q04602 UBP3YER151C 2739 nt1.04□□□□□ -2.24
VBA4Q04602 SIP4YJL089W 2490 nt1.04□□□□□ -2.24
VBA4Q04602 SOM1YEL059C-A 225 nt1.03□□□□□ -2.24
VBA4Q04602 YNL205CYNL205C 423 nt1.02□□□□□ -2.25
VBA4Q04602 snR85snR85 171 nt1.01□□□□□ -2.25
VBA4Q04602 VAM6YDL077C 3150 nt1□□□□□ -2.25
VBA4Q04602 YJR029WYJR029W 5268 nt1□□□□□ -2.25
VBA4Q04602 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
VBA4Q04602 YBR099CYBR099C 384 nt1□□□□□ -2.25
VBA4Q04602 YPR117WYPR117W 7470 nt0.99□□□□□ -2.25
VBA4Q04602 SCC2YDR180W 4482 nt0.99□□□□□ -2.25
VBA4Q04602 YGR146C-AYGR146C-A 162 nt0.99□□□□□ -2.25
VBA4Q04602 YJL127W-AYJL127W-A 117 nt0.99□□□□□ -2.25
VBA4Q04602 ULP2YIL031W 3105 nt0.98□□□□□ -2.25
VBA4Q04602 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
VBA4Q04602 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
VBA4Q04602 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
VBA4Q04602 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
VBA4Q04602 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
VBA4Q04602 YBR072C-AYBR072C-A 162 nt0.98□□□□□ -2.25
VBA4Q04602 GLG1YKR058W 1851 nt0.97□□□□□ -2.25
VBA4Q04602 STF2YGR008C 255 nt0.93□□□□□ -2.26
VBA4Q04602 BEM2YER155C 6504 nt0.92□□□□□ -2.26
VBA4Q04602 NNF2YGR089W 2811 nt0.92□□□□□ -2.26
VBA4Q04602 DOP1YDR141C 5097 nt0.9□□□□□ -2.26
VBA4Q04602 YLL006W-AYLL006W-A 177 nt0.9□□□□□ -2.27
VBA4Q04602 BIR1YJR089W 2865 nt0.9□□□□□ -2.27
VBA4Q04602 BUL2YML111W 2763 nt0.88□□□□□ -2.27
VBA4Q04602 YPL060C-AYPL060C-A 3315 nt0.88□□□□□ -2.27
VBA4Q04602 RCO1YMR075W 2055 nt0.86□□□□□ -2.27
VBA4Q04602 PMP2YEL017C-A 132 nt0.86□□□□□ -2.27
VBA4Q04602 YOR192C-BYOR192C-B 5313 nt0.84□□□□□ -2.27
VBA4Q04602 NIP1YMR309C 2439 nt0.84□□□□□ -2.28
VBA4Q04602 YNL103W-AYNL103W-A 90 nt0.83□□□□□ -2.28
VBA4Q04602 YNL266WYNL266W 420 nt0.82□□□□□ -2.28
VBA4Q04602 LTE1YAL024C 4308 nt0.8□□□□□ -2.28
VBA4Q04602 RPS26AYGL189C 360 nt0.79□□□□□ -2.28
VBA4Q04602 HUG1YML058W-A 207 nt0.79□□□□□ -2.28
VBA4Q04602 PAU24YBR301W 363 nt0.79□□□□□ -2.28
VBA4Q04602 PET111YMR257C 2403 nt0.78□□□□□ -2.28
VBA4Q04602 CSE1YGL238W 2883 nt0.78□□□□□ -2.29
VBA4Q04602 snR61snR61 90 nt0.77□□□□□ -2.29
VBA4Q04602 YDR371C-AYDR371C-A 105 nt0.77□□□□□ -2.29
VBA4Q04602 PAU12YGR294W 363 nt0.77□□□□□ -2.29
VBA4Q04602 YBR178WYBR178W 375 nt0.77□□□□□ -2.29
VBA4Q04602 TFB5YDR079C-A 219 nt0.75□□□□□ -2.29
VBA4Q04602 SEC10YLR166C 2616 nt0.75□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 73.1 ms