Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 tF(GAA)P2tF(GAA)P2 73 nt0.6□□□□□ -2.31
RPN9Q04062 tN(GUU)QtN(GUU)Q 71 nt0.6□□□□□ -2.31
RPN9Q04062 BLI1YKL061W 342 nt0.6□□□□□ -2.31
RPN9Q04062 OST4YDL232W 111 nt0.59□□□□□ -2.31
RPN9Q04062 ULI1YFR026C 510 nt0.59□□□□□ -2.31
RPN9Q04062 PRP42YDR235W 1635 nt0.59□□□□□ -2.32
RPN9Q04062 HAL9YOL089C 3093 nt0.56□□□□□ -2.32
RPN9Q04062 YOR192C-BYOR192C-B 5313 nt0.56□□□□□ -2.32
RPN9Q04062 YOR345CYOR345C 351 nt0.56□□□□□ -2.32
RPN9Q04062 UTP20YBL004W 7482 nt0.55□□□□□ -2.32
RPN9Q04062 PET111YMR257C 2403 nt0.55□□□□□ -2.32
RPN9Q04062 YOR231C-AYOR231C-A 201 nt0.55□□□□□ -2.32
RPN9Q04062 YKL100W-AYKL100W-A 90 nt0.54□□□□□ -2.32
RPN9Q04062 YCR022CYCR022C 345 nt0.53□□□□□ -2.32
RPN9Q04062 COX12YLR038C 252 nt0.53□□□□□ -2.32
RPN9Q04062 BEM3YPL115C 3387 nt0.52□□□□□ -2.33
RPN9Q04062 YKL145W-AYKL145W-A 93 nt0.52□□□□□ -2.33
RPN9Q04062 YPL152W-AYPL152W-A 99 nt0.52□□□□□ -2.33
RPN9Q04062 snR49snR49 165 nt0.52□□□□□ -2.33
RPN9Q04062 YER053C-AYER053C-A 114 nt0.51□□□□□ -2.33
RPN9Q04062 PAU12YGR294W 363 nt0.51□□□□□ -2.33
RPN9Q04062 YIR030W-AYIR030W-A 384 nt0.5□□□□□ -2.33
RPN9Q04062 snR55snR55 98 nt0.49□□□□□ -2.33
RPN9Q04062 YCR038W-AYCR038W-A 126 nt0.49□□□□□ -2.33
RPN9Q04062 SBH1YER087C-B 249 nt0.49□□□□□ -2.33
RPN9Q04062 QCR9YGR183C 201 nt0.49□□□□□ -2.33
RPN9Q04062 YBR182C-AYBR182C-A 195 nt0.49□□□□□ -2.33
RPN9Q04062 YSP1YHR155W 3687 nt0.48□□□□□ -2.33
RPN9Q04062 tF(GAA)QtF(GAA)Q 75 nt0.48□□□□□ -2.33
RPN9Q04062 YLR041WYLR041W 321 nt0.48□□□□□ -2.33
RPN9Q04062 YKU70YMR284W 1809 nt0.48□□□□□ -2.33
RPN9Q04062 NNF2YGR089W 2811 nt0.46□□□□□ -2.34
RPN9Q04062 YDR366CYDR366C 399 nt0.46□□□□□ -2.34
RPN9Q04062 YHR131W-AYHR131W-A 246 nt0.46□□□□□ -2.34
RPN9Q04062 YER181CYER181C 324 nt0.45□□□□□ -2.34
RPN9Q04062 YIL002W-AYIL002W-A 210 nt0.45□□□□□ -2.34
RPN9Q04062 YOL014WYOL014W 375 nt0.45□□□□□ -2.34
RPN9Q04062 SNU13YEL026W 381 nt0.44□□□□□ -2.34
RPN9Q04062 MYO1YHR023W 5787 nt0.44□□□□□ -2.34
RPN9Q04062 MLP1YKR095W 5628 nt0.43□□□□□ -2.34
RPN9Q04062 YGL041CYGL041C 204 nt0.43□□□□□ -2.34
RPN9Q04062 YOL155W-AYOL155W-A 135 nt0.43□□□□□ -2.34
RPN9Q04062 TRS65YGR166W 1683 nt0.43□□□□□ -2.34
RPN9Q04062 UTP8YGR128C 2142 nt0.42□□□□□ -2.34
RPN9Q04062 ULP2YIL031W 3105 nt0.42□□□□□ -2.34
RPN9Q04062 APQ12YIL040W 417 nt0.41□□□□□ -2.34
RPN9Q04062 YDR371C-AYDR371C-A 105 nt0.4□□□□□ -2.35
RPN9Q04062 RPS26AYGL189C 360 nt0.4□□□□□ -2.35
RPN9Q04062 FMP27YLR454W 7887 nt0.4□□□□□ -2.35
RPN9Q04062 ORC3YLL004W 1851 nt0.39□□□□□ -2.35
RPN9Q04062 YGL188C-AYGL188C-A 141 nt0.39□□□□□ -2.35
RPN9Q04062 YLL006W-AYLL006W-A 177 nt0.39□□□□□ -2.35
RPN9Q04062 YBR131C-AYBR131C-A 90 nt0.39□□□□□ -2.35
RPN9Q04062 YML099W-AYML099W-A 330 nt0.38□□□□□ -2.35
RPN9Q04062 ABF2YMR072W 552 nt0.38□□□□□ -2.35
RPN9Q04062 AI1Q0050 2505 nt0.36□□□□□ -2.35
RPN9Q04062 NIP1YMR309C 2439 nt0.36□□□□□ -2.35
RPN9Q04062 YBR072C-AYBR072C-A 162 nt0.36□□□□□ -2.35
RPN9Q04062 YLR232WYLR232W 348 nt0.35□□□□□ -2.35
RPN9Q04062 IQG1YPL242C 4488 nt0.32□□□□□ -2.36
RPN9Q04062 BIR1YJR089W 2865 nt0.31□□□□□ -2.36
RPN9Q04062 TAH1YCR060W 336 nt0.31□□□□□ -2.36
RPN9Q04062 YOR302WYOR302W 78 nt0.31□□□□□ -2.36
RPN9Q04062 snR80snR80 171 nt0.3□□□□□ -2.36
RPN9Q04062 YDR544CYDR544C 429 nt0.3□□□□□ -2.36
RPN9Q04062 MLP2YIL149C 5040 nt0.28□□□□□ -2.37
RPN9Q04062 PRP39YML046W 1890 nt0.27□□□□□ -2.37
RPN9Q04062 RCO1YMR075W 2055 nt0.27□□□□□ -2.37
RPN9Q04062 YEL014CYEL014C 306 nt0.27□□□□□ -2.37
RPN9Q04062 BUL2YML111W 2763 nt0.26□□□□□ -2.37
RPN9Q04062 SDH6YDR379C-A 240 nt0.25□□□□□ -2.37
RPN9Q04062 YBL039C-AYBL039C-A 84 nt0.25□□□□□ -2.37
RPN9Q04062 YMR158W-BYMR158W-B 321 nt0.25□□□□□ -2.37
RPN9Q04062 YNL097C-BYNL097C-B 123 nt0.25□□□□□ -2.37
RPN9Q04062 CSE1YGL238W 2883 nt0.25□□□□□ -2.37
RPN9Q04062 YJL182CYJL182C 318 nt0.24□□□□□ -2.37
RPN9Q04062 GLG1YKR058W 1851 nt0.24□□□□□ -2.37
RPN9Q04062 YEL073CYEL073C 324 nt0.23□□□□□ -2.37
RPN9Q04062 YOL013W-AYOL013W-A 192 nt0.23□□□□□ -2.37
RPN9Q04062 YBL100W-BYBL100W-B 5313 nt0.23□□□□□ -2.37
RPN9Q04062 ESP1YGR098C 4893 nt0.22□□□□□ -2.37
RPN9Q04062 snR8snR8 190 nt0.22□□□□□ -2.37
RPN9Q04062 YOR186C-AYOR186C-A 210 nt0.22□□□□□ -2.37
RPN9Q04062 YGL182CYGL182C 324 nt0.2□□□□□ -2.38
RPN9Q04062 COG6YNL041C 2520 nt0.2□□□□□ -2.38
RPN9Q04062 YER078W-AYER078W-A 165 nt0.15□□□□□ -2.39
RPN9Q04062 YOR314W-AYOR314W-A 111 nt0.12□□□□□ -2.39
RPN9Q04062 YOR381W-AYOR381W-A 168 nt0.12□□□□□ -2.39
RPN9Q04062 YNL054W-BYNL054W-B 5250 nt0.12□□□□□ -2.39
RPN9Q04062 snR52snR52 92 nt0.11□□□□□ -2.39
RPN9Q04062 YBR099CYBR099C 384 nt0.1□□□□□ -2.39
RPN9Q04062 snR46snR46 197 nt0.07□□□□□ -2.4
RPN9Q04062 YOR170WYOR170W 306 nt0.06□□□□□ -2.4
RPN9Q04062 YDR210WYDR210W 228 nt0.05□□□□□ -2.4
RPN9Q04062 THO2YNL139C 4794 nt0.04□□□□□ -2.4
RPN9Q04062 tM(CAU)Q2tM(CAU)Q2 78 nt0.04□□□□□ -2.4
RPN9Q04062 YLR342W-AYLR342W-A 174 nt0.04□□□□□ -2.4
RPN9Q04062 EST1YLR233C 2100 nt0.04□□□□□ -2.4
RPN9Q04062 SOV1YMR066W 2697 nt0.03□□□□□ -2.4
RPN9Q04062 YDR406W-AYDR406W-A 246 nt0.02□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 60.9 ms