Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 snR39BsnR39B 96 nt1.41□□□□□ -2.18
CTK1Q03957 AZF1YOR113W 2745 nt1.41□□□□□ -2.18
CTK1Q03957 YCR095W-AYCR095W-A 159 nt1.4□□□□□ -2.19
CTK1Q03957 YBR099CYBR099C 384 nt1.4□□□□□ -2.19
CTK1Q03957 QCR9YGR183C 201 nt1.39□□□□□ -2.19
CTK1Q03957 YNL067W-BYNL067W-B 141 nt1.39□□□□□ -2.19
CTK1Q03957 CDC25YLR310C 4770 nt1.38□□□□□ -2.19
CTK1Q03957 FIG2YCR089W 4830 nt1.38□□□□□ -2.19
CTK1Q03957 CHS1YNL192W 3396 nt1.38□□□□□ -2.19
CTK1Q03957 PET127YOR017W 2403 nt1.37□□□□□ -2.19
CTK1Q03957 ROM2YLR371W 4071 nt1.36□□□□□ -2.19
CTK1Q03957 SOM1YEL059C-A 225 nt1.36□□□□□ -2.19
CTK1Q03957 SAC3YDR159W 3906 nt1.36□□□□□ -2.19
CTK1Q03957 SXM1YDR395W 2835 nt1.35□□□□□ -2.19
CTK1Q03957 MSN5YDR335W 3675 nt1.35□□□□□ -2.19
CTK1Q03957 KAP120YPL125W 3099 nt1.35□□□□□ -2.19
CTK1Q03957 YHR131W-AYHR131W-A 246 nt1.35□□□□□ -2.19
CTK1Q03957 YLR232WYLR232W 348 nt1.35□□□□□ -2.19
CTK1Q03957 YBL109WYBL109W 336 nt1.35□□□□□ -2.19
CTK1Q03957 YDR524C-AYDR524C-A 120 nt1.34□□□□□ -2.19
CTK1Q03957 tQ(UUG)E2tQ(UUG)E2 72 nt1.34□□□□□ -2.19
CTK1Q03957 FYV8YGR196C 2454 nt1.34□□□□□ -2.2
CTK1Q03957 PMP2YEL017C-A 132 nt1.33□□□□□ -2.2
CTK1Q03957 YBR178WYBR178W 375 nt1.33□□□□□ -2.2
CTK1Q03957 RAD9YDR217C 3930 nt1.32□□□□□ -2.2
CTK1Q03957 PIK1YNL267W 3201 nt1.32□□□□□ -2.2
CTK1Q03957 YDR544CYDR544C 429 nt1.32□□□□□ -2.2
CTK1Q03957 COG6YNL041C 2520 nt1.32□□□□□ -2.2
CTK1Q03957 PRP16YKR086W 3216 nt1.31□□□□□ -2.2
CTK1Q03957 YNL103W-AYNL103W-A 90 nt1.31□□□□□ -2.2
CTK1Q03957 SEC8YPR055W 3198 nt1.31□□□□□ -2.2
CTK1Q03957 MSH3YCR092C 3057 nt1.3□□□□□ -2.2
CTK1Q03957 tM(CAU)Q2tM(CAU)Q2 78 nt1.3□□□□□ -2.2
CTK1Q03957 SPC110YDR356W 2835 nt1.3□□□□□ -2.2
CTK1Q03957 TFB5YDR079C-A 219 nt1.29□□□□□ -2.2
CTK1Q03957 CLU1YMR012W 3834 nt1.29□□□□□ -2.2
CTK1Q03957 YDR210WYDR210W 228 nt1.28□□□□□ -2.2
CTK1Q03957 YPR160W-AYPR160W-A 81 nt1.28□□□□□ -2.2
CTK1Q03957 tH(GUG)E1tH(GUG)E1 72 nt1.27□□□□□ -2.21
CTK1Q03957 tH(GUG)E2tH(GUG)E2 72 nt1.27□□□□□ -2.21
CTK1Q03957 tH(GUG)G1tH(GUG)G1 72 nt1.27□□□□□ -2.21
CTK1Q03957 tH(GUG)G2tH(GUG)G2 72 nt1.27□□□□□ -2.21
CTK1Q03957 tH(GUG)HtH(GUG)H 72 nt1.27□□□□□ -2.21
CTK1Q03957 tH(GUG)KtH(GUG)K 72 nt1.27□□□□□ -2.21
CTK1Q03957 tH(GUG)MtH(GUG)M 72 nt1.27□□□□□ -2.21
CTK1Q03957 tN(GUU)QtN(GUU)Q 71 nt1.27□□□□□ -2.21
CTK1Q03957 STF2YGR008C 255 nt1.26□□□□□ -2.21
CTK1Q03957 YLR399W-AYLR399W-A 105 nt1.26□□□□□ -2.21
CTK1Q03957 RPM2YML091C 3609 nt1.26□□□□□ -2.21
CTK1Q03957 YDL073WYDL073W 2955 nt1.25□□□□□ -2.21
CTK1Q03957 SEC1YDR164C 2175 nt1.24□□□□□ -2.21
CTK1Q03957 LAA1YJL207C 6045 nt1.23□□□□□ -2.21
CTK1Q03957 YGR130CYGR130C 2451 nt1.23□□□□□ -2.21
CTK1Q03957 snR61snR61 90 nt1.23□□□□□ -2.21
CTK1Q03957 HKR1YDR420W 5409 nt1.22□□□□□ -2.21
CTK1Q03957 MYO1YHR023W 5787 nt1.22□□□□□ -2.21
CTK1Q03957 YMR326CYMR326C 309 nt1.22□□□□□ -2.21
CTK1Q03957 RCO1YMR075W 2055 nt1.22□□□□□ -2.21
CTK1Q03957 YJL127W-AYJL127W-A 117 nt1.21□□□□□ -2.22
CTK1Q03957 YGR146C-AYGR146C-A 162 nt1.19□□□□□ -2.22
CTK1Q03957 YSP1YHR155W 3687 nt1.17□□□□□ -2.22
CTK1Q03957 YHR217CYHR217C 462 nt1.16□□□□□ -2.22
CTK1Q03957 BIR1YJR089W 2865 nt1.15□□□□□ -2.22
CTK1Q03957 BEM3YPL115C 3387 nt1.15□□□□□ -2.22
CTK1Q03957 IML1YJR138W 4755 nt1.15□□□□□ -2.23
CTK1Q03957 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
CTK1Q03957 YNL284C-BYNL284C-B 5268 nt1.12□□□□□ -2.23
CTK1Q03957 SBH1YER087C-B 249 nt1.11□□□□□ -2.23
CTK1Q03957 YGL041C-BYGL041C-B 183 nt1.11□□□□□ -2.23
CTK1Q03957 SIP4YJL089W 2490 nt1.11□□□□□ -2.23
CTK1Q03957 NNF2YGR089W 2811 nt1.1□□□□□ -2.23
CTK1Q03957 YNL266WYNL266W 420 nt1.1□□□□□ -2.23
CTK1Q03957 YBR072C-AYBR072C-A 162 nt1.1□□□□□ -2.23
CTK1Q03957 BUD3YCL014W 4911 nt1.1□□□□□ -2.23
CTK1Q03957 UBP3YER151C 2739 nt1.09□□□□□ -2.23
CTK1Q03957 ULP2YIL031W 3105 nt1.09□□□□□ -2.23
CTK1Q03957 GLG1YKR058W 1851 nt1.08□□□□□ -2.24
CTK1Q03957 tV(UAC)BtV(UAC)B 74 nt1.07□□□□□ -2.24
CTK1Q03957 tV(UAC)DtV(UAC)D 74 nt1.07□□□□□ -2.24
CTK1Q03957 RKR1YMR247C 4689 nt1.06□□□□□ -2.24
CTK1Q03957 HUG1YML058W-A 207 nt1.05□□□□□ -2.24
CTK1Q03957 YPL060C-AYPL060C-A 3315 nt1.04□□□□□ -2.24
CTK1Q03957 YPR117WYPR117W 7470 nt1.02□□□□□ -2.25
CTK1Q03957 VAM6YDL077C 3150 nt1.02□□□□□ -2.25
CTK1Q03957 snR81snR81 201 nt1.01□□□□□ -2.25
CTK1Q03957 BEM2YER155C 6504 nt1□□□□□ -2.25
CTK1Q03957 NST1YNL091W 3723 nt0.99□□□□□ -2.25
CTK1Q03957 YLL006W-AYLL006W-A 177 nt0.98□□□□□ -2.25
CTK1Q03957 SCC2YDR180W 4482 nt0.97□□□□□ -2.25
CTK1Q03957 SEC10YLR166C 2616 nt0.97□□□□□ -2.25
CTK1Q03957 YJR029WYJR029W 5268 nt0.96□□□□□ -2.26
CTK1Q03957 YPR137C-BYPR137C-B 5268 nt0.96□□□□□ -2.26
CTK1Q03957 YDL247W-AYDL247W-A 75 nt0.96□□□□□ -2.26
CTK1Q03957 YAL037C-AYAL037C-A 93 nt0.96□□□□□ -2.26
CTK1Q03957 BUL2YML111W 2763 nt0.96□□□□□ -2.26
CTK1Q03957 YBR196C-AYBR196C-A 150 nt0.94□□□□□ -2.26
CTK1Q03957 tS(GCU)Q1tS(GCU)Q1 86 nt0.93□□□□□ -2.26
CTK1Q03957 DOP1YDR141C 5097 nt0.91□□□□□ -2.26
CTK1Q03957 CSE1YGL238W 2883 nt0.9□□□□□ -2.26
CTK1Q03957 YOR192C-BYOR192C-B 5313 nt0.9□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 54.8 ms