Protein–RNA interactions for Protein: Q03430

RSM28, 37S ribosomal protein RSM28, mitochondrial, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSM28Q03430 BFR2YDR299W 1605 nt1.03□□□□□ -2.24
RSM28Q03430 SEC8YPR055W 3198 nt1.02□□□□□ -2.25
RSM28Q03430 YJL182CYJL182C 318 nt1.02□□□□□ -2.25
RSM28Q03430 STF2YGR008C 255 nt1□□□□□ -2.25
RSM28Q03430 YLR342W-AYLR342W-A 174 nt1□□□□□ -2.25
RSM28Q03430 HUG1YML058W-A 207 nt1□□□□□ -2.25
RSM28Q03430 YNL198CYNL198C 303 nt1□□□□□ -2.25
RSM28Q03430 SIP4YJL089W 2490 nt1□□□□□ -2.25
RSM28Q03430 YEL073CYEL073C 324 nt0.99□□□□□ -2.25
RSM28Q03430 YPR160W-AYPR160W-A 81 nt0.99□□□□□ -2.25
RSM28Q03430 YJR029WYJR029W 5268 nt0.98□□□□□ -2.25
RSM28Q03430 YPR137C-BYPR137C-B 5268 nt0.98□□□□□ -2.25
RSM28Q03430 YLR041WYLR041W 321 nt0.98□□□□□ -2.25
RSM28Q03430 YLR399W-AYLR399W-A 105 nt0.98□□□□□ -2.25
RSM28Q03430 FYV10YIL097W 1551 nt0.98□□□□□ -2.25
RSM28Q03430 PRP42YDR235W 1635 nt0.97□□□□□ -2.25
RSM28Q03430 UTP8YGR128C 2142 nt0.97□□□□□ -2.25
RSM28Q03430 YLR466C-BYLR466C-B 117 nt0.97□□□□□ -2.25
RSM28Q03430 PRP5YBR237W 2550 nt0.96□□□□□ -2.26
RSM28Q03430 PRP39YML046W 1890 nt0.96□□□□□ -2.26
RSM28Q03430 YGR151CYGR151C 336 nt0.95□□□□□ -2.26
RSM28Q03430 Q0032Q0032 291 nt0.94□□□□□ -2.26
RSM28Q03430 BUD3YCL014W 4911 nt0.94□□□□□ -2.26
RSM28Q03430 RKR1YMR247C 4689 nt0.94□□□□□ -2.26
RSM28Q03430 YGL007C-AYGL007C-A 87 nt0.93□□□□□ -2.26
RSM28Q03430 UBP3YER151C 2739 nt0.92□□□□□ -2.26
RSM28Q03430 TRS65YGR166W 1683 nt0.91□□□□□ -2.26
RSM28Q03430 tN(GUU)QtN(GUU)Q 71 nt0.9□□□□□ -2.27
RSM28Q03430 YOR225WYOR225W 330 nt0.9□□□□□ -2.27
RSM28Q03430 YHR131W-AYHR131W-A 246 nt0.88□□□□□ -2.27
RSM28Q03430 YOR381W-AYOR381W-A 168 nt0.88□□□□□ -2.27
RSM28Q03430 CHS6YJL099W 2241 nt0.88□□□□□ -2.27
RSM28Q03430 TAH1YCR060W 336 nt0.87□□□□□ -2.27
RSM28Q03430 YGL182CYGL182C 324 nt0.87□□□□□ -2.27
RSM28Q03430 YLR232WYLR232W 348 nt0.86□□□□□ -2.27
RSM28Q03430 YBL039C-AYBL039C-A 84 nt0.86□□□□□ -2.27
RSM28Q03430 OST4YDL232W 111 nt0.85□□□□□ -2.27
RSM28Q03430 SNU13YEL026W 381 nt0.85□□□□□ -2.27
RSM28Q03430 YSP1YHR155W 3687 nt0.83□□□□□ -2.28
RSM28Q03430 BEM3YPL115C 3387 nt0.82□□□□□ -2.28
RSM28Q03430 YNL338WYNL338W 159 nt0.82□□□□□ -2.28
RSM28Q03430 YOR170WYOR170W 306 nt0.81□□□□□ -2.28
RSM28Q03430 PAU24YBR301W 363 nt0.81□□□□□ -2.28
RSM28Q03430 LTE1YAL024C 4308 nt0.78□□□□□ -2.28
RSM28Q03430 YJL127W-AYJL127W-A 117 nt0.78□□□□□ -2.28
RSM28Q03430 SEC1YDR164C 2175 nt0.77□□□□□ -2.29
RSM28Q03430 YDR544CYDR544C 429 nt0.77□□□□□ -2.29
RSM28Q03430 YHL015W-AYHL015W-A 84 nt0.77□□□□□ -2.29
RSM28Q03430 snR48snR48 113 nt0.77□□□□□ -2.29
RSM28Q03430 YLR294CYLR294C 330 nt0.76□□□□□ -2.29
RSM28Q03430 YOR102WYOR102W 351 nt0.74□□□□□ -2.29
RSM28Q03430 YBR072C-AYBR072C-A 162 nt0.72□□□□□ -2.29
RSM28Q03430 NNF2YGR089W 2811 nt0.72□□□□□ -2.29
RSM28Q03430 COG6YNL041C 2520 nt0.71□□□□□ -2.3
RSM28Q03430 YIL142C-AYIL142C-A 333 nt0.71□□□□□ -2.3
RSM28Q03430 YBL053WYBL053W 375 nt0.71□□□□□ -2.3
RSM28Q03430 YOR314W-AYOR314W-A 111 nt0.7□□□□□ -2.3
RSM28Q03430 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
RSM28Q03430 tL(UAA)QtL(UAA)Q 85 nt0.69□□□□□ -2.3
RSM28Q03430 YMR272W-AYMR272W-A 114 nt0.69□□□□□ -2.3
RSM28Q03430 YOR329W-AYOR329W-A 210 nt0.69□□□□□ -2.3
RSM28Q03430 PET111YMR257C 2403 nt0.68□□□□□ -2.3
RSM28Q03430 SDH6YDR379C-A 240 nt0.68□□□□□ -2.3
RSM28Q03430 GLG1YKR058W 1851 nt0.68□□□□□ -2.3
RSM28Q03430 YLL006W-AYLL006W-A 177 nt0.68□□□□□ -2.3
RSM28Q03430 RPM2YML091C 3609 nt0.68□□□□□ -2.3
RSM28Q03430 ULP2YIL031W 3105 nt0.68□□□□□ -2.3
RSM28Q03430 YOR192C-BYOR192C-B 5313 nt0.68□□□□□ -2.3
RSM28Q03430 tF(GAA)BtF(GAA)B 73 nt0.67□□□□□ -2.3
RSM28Q03430 tF(GAA)FtF(GAA)F 73 nt0.67□□□□□ -2.3
RSM28Q03430 tF(GAA)GtF(GAA)G 73 nt0.67□□□□□ -2.3
RSM28Q03430 tF(GAA)H1tF(GAA)H1 73 nt0.67□□□□□ -2.3
RSM28Q03430 tF(GAA)H2tF(GAA)H2 73 nt0.67□□□□□ -2.3
RSM28Q03430 tF(GAA)MtF(GAA)M 73 nt0.67□□□□□ -2.3
RSM28Q03430 tF(GAA)P1tF(GAA)P1 73 nt0.67□□□□□ -2.3
RSM28Q03430 tF(GAA)P2tF(GAA)P2 73 nt0.67□□□□□ -2.3
RSM28Q03430 YDL007C-AYDL007C-A 258 nt0.66□□□□□ -2.3
RSM28Q03430 tM(CAU)Q2tM(CAU)Q2 78 nt0.66□□□□□ -2.3
RSM28Q03430 MYO1YHR023W 5787 nt0.65□□□□□ -2.3
RSM28Q03430 BUL2YML111W 2763 nt0.65□□□□□ -2.3
RSM28Q03430 PAU12YGR294W 363 nt0.64□□□□□ -2.31
RSM28Q03430 IQG1YPL242C 4488 nt0.64□□□□□ -2.31
RSM28Q03430 QCR9YGR183C 201 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)BtT(AGU)B 73 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)CtT(AGU)C 73 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)DtT(AGU)D 73 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)HtT(AGU)H 73 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)I1tT(AGU)I1 73 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)I2tT(AGU)I2 73 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)JtT(AGU)J 73 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)N1tT(AGU)N1 73 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)N2tT(AGU)N2 73 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)O1tT(AGU)O1 73 nt0.63□□□□□ -2.31
RSM28Q03430 tT(AGU)O2tT(AGU)O2 73 nt0.63□□□□□ -2.31
RSM28Q03430 NIP1YMR309C 2439 nt0.63□□□□□ -2.31
RSM28Q03430 YMR160WYMR160W 2451 nt0.62□□□□□ -2.31
RSM28Q03430 snR39BsnR39B 96 nt0.62□□□□□ -2.31
RSM28Q03430 UTP20YBL004W 7482 nt0.61□□□□□ -2.31
RSM28Q03430 YDR210WYDR210W 228 nt0.61□□□□□ -2.31
RSM28Q03430 RPS26AYGL189C 360 nt0.6□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 32.1 ms