Protein–RNA interactions for Protein: P53958

BOP3, Protein BOP3, yeastyeast

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BOP3P53958 tH(GUG)MtH(GUG)M 72 nt1.27□□□□□ -2.21
BOP3P53958 COX5BYIL111W 456 nt1.27□□□□□ -2.21
BOP3P53958 YLR282CYLR282C 342 nt1.27□□□□□ -2.21
BOP3P53958 YBL039C-AYBL039C-A 84 nt1.27□□□□□ -2.21
BOP3P53958 RSM22YKL155C 1887 nt1.26□□□□□ -2.21
BOP3P53958 CDC39YCR093W 6327 nt1.26□□□□□ -2.21
BOP3P53958 NOP9YJL010C 2001 nt1.25□□□□□ -2.21
BOP3P53958 CHS6YJL099W 2241 nt1.25□□□□□ -2.21
BOP3P53958 NUP145YGL092W 3954 nt1.25□□□□□ -2.21
BOP3P53958 GEA2YEL022W 4380 nt1.24□□□□□ -2.21
BOP3P53958 YBL109WYBL109W 336 nt1.23□□□□□ -2.21
BOP3P53958 snR39BsnR39B 96 nt1.23□□□□□ -2.21
BOP3P53958 WAR1YML076C 2835 nt1.23□□□□□ -2.21
BOP3P53958 TAH1YCR060W 336 nt1.22□□□□□ -2.21
BOP3P53958 OST4YDL232W 111 nt1.22□□□□□ -2.21
BOP3P53958 YLR041WYLR041W 321 nt1.22□□□□□ -2.21
BOP3P53958 YBR200W-AYBR200W-A 165 nt1.22□□□□□ -2.21
BOP3P53958 UTP8YGR128C 2142 nt1.22□□□□□ -2.21
BOP3P53958 DOP1YDR141C 5097 nt1.21□□□□□ -2.22
BOP3P53958 YCR095W-AYCR095W-A 159 nt1.21□□□□□ -2.22
BOP3P53958 RAD9YDR217C 3930 nt1.21□□□□□ -2.22
BOP3P53958 YPR117WYPR117W 7470 nt1.2□□□□□ -2.22
BOP3P53958 SCC2YDR180W 4482 nt1.2□□□□□ -2.22
BOP3P53958 SMC1YFL008W 3678 nt1.2□□□□□ -2.22
BOP3P53958 YGR130CYGR130C 2451 nt1.2□□□□□ -2.22
BOP3P53958 YML002WYML002W 2214 nt1.2□□□□□ -2.22
BOP3P53958 SEC3YER008C 4011 nt1.2□□□□□ -2.22
BOP3P53958 FYV10YIL097W 1551 nt1.19□□□□□ -2.22
BOP3P53958 YKL100W-AYKL100W-A 90 nt1.19□□□□□ -2.22
BOP3P53958 snR190snR190 190 nt1.19□□□□□ -2.22
BOP3P53958 YBR099CYBR099C 384 nt1.19□□□□□ -2.22
BOP3P53958 IML1YJR138W 4755 nt1.18□□□□□ -2.22
BOP3P53958 QCR9YGR183C 201 nt1.18□□□□□ -2.22
BOP3P53958 YHR131W-AYHR131W-A 246 nt1.18□□□□□ -2.22
BOP3P53958 YDR524C-AYDR524C-A 120 nt1.17□□□□□ -2.22
BOP3P53958 YNL067W-BYNL067W-B 141 nt1.17□□□□□ -2.22
BOP3P53958 YNL103W-AYNL103W-A 90 nt1.17□□□□□ -2.22
BOP3P53958 COG6YNL041C 2520 nt1.16□□□□□ -2.22
BOP3P53958 PMP2YEL017C-A 132 nt1.16□□□□□ -2.22
BOP3P53958 YBR178WYBR178W 375 nt1.16□□□□□ -2.22
BOP3P53958 SOM1YEL059C-A 225 nt1.15□□□□□ -2.23
BOP3P53958 YDR544CYDR544C 429 nt1.14□□□□□ -2.23
BOP3P53958 RPL26BYGR034W 384 nt1.14□□□□□ -2.23
BOP3P53958 tV(UAC)BtV(UAC)B 74 nt1.14□□□□□ -2.23
BOP3P53958 tV(UAC)DtV(UAC)D 74 nt1.14□□□□□ -2.23
BOP3P53958 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
BOP3P53958 TFB5YDR079C-A 219 nt1.13□□□□□ -2.23
BOP3P53958 YNL284C-BYNL284C-B 5268 nt1.13□□□□□ -2.23
BOP3P53958 SIP4YJL089W 2490 nt1.13□□□□□ -2.23
BOP3P53958 CLU1YMR012W 3834 nt1.12□□□□□ -2.23
BOP3P53958 ROM2YLR371W 4071 nt1.12□□□□□ -2.23
BOP3P53958 KAP120YPL125W 3099 nt1.11□□□□□ -2.23
BOP3P53958 YDR210WYDR210W 228 nt1.11□□□□□ -2.23
BOP3P53958 YLR232WYLR232W 348 nt1.11□□□□□ -2.23
BOP3P53958 RCO1YMR075W 2055 nt1.11□□□□□ -2.23
BOP3P53958 SPT7YBR081C 3999 nt1.1□□□□□ -2.23
BOP3P53958 MYO1YHR023W 5787 nt1.1□□□□□ -2.23
BOP3P53958 tN(GUU)QtN(GUU)Q 71 nt1.09□□□□□ -2.23
BOP3P53958 NST1YNL091W 3723 nt1.09□□□□□ -2.24
BOP3P53958 tM(CAU)Q2tM(CAU)Q2 78 nt1.08□□□□□ -2.24
BOP3P53958 SEC1YDR164C 2175 nt1.07□□□□□ -2.24
BOP3P53958 PRP16YKR086W 3216 nt1.07□□□□□ -2.24
BOP3P53958 YDL073WYDL073W 2955 nt1.07□□□□□ -2.24
BOP3P53958 BUD3YCL014W 4911 nt1.06□□□□□ -2.24
BOP3P53958 YPR160W-AYPR160W-A 81 nt1.05□□□□□ -2.24
BOP3P53958 SEC8YPR055W 3198 nt1.04□□□□□ -2.24
BOP3P53958 snR61snR61 90 nt1.04□□□□□ -2.24
BOP3P53958 YMR326CYMR326C 309 nt1.03□□□□□ -2.24
BOP3P53958 STF2YGR008C 255 nt1.01□□□□□ -2.25
BOP3P53958 YHR217CYHR217C 462 nt1.01□□□□□ -2.25
BOP3P53958 YJL127W-AYJL127W-A 117 nt1.01□□□□□ -2.25
BOP3P53958 YJR029WYJR029W 5268 nt1.01□□□□□ -2.25
BOP3P53958 YPR137C-BYPR137C-B 5268 nt1.01□□□□□ -2.25
BOP3P53958 YLR399W-AYLR399W-A 105 nt1□□□□□ -2.25
BOP3P53958 PAU24YBR301W 363 nt0.99□□□□□ -2.25
BOP3P53958 YGL041C-BYGL041C-B 183 nt0.98□□□□□ -2.25
BOP3P53958 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
BOP3P53958 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
BOP3P53958 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
BOP3P53958 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
BOP3P53958 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
BOP3P53958 YGR146C-AYGR146C-A 162 nt0.97□□□□□ -2.25
BOP3P53958 BIR1YJR089W 2865 nt0.97□□□□□ -2.25
BOP3P53958 RKR1YMR247C 4689 nt0.96□□□□□ -2.26
BOP3P53958 NNF2YGR089W 2811 nt0.96□□□□□ -2.26
BOP3P53958 UBP3YER151C 2739 nt0.95□□□□□ -2.26
BOP3P53958 YNL266WYNL266W 420 nt0.93□□□□□ -2.26
BOP3P53958 SBH1YER087C-B 249 nt0.92□□□□□ -2.26
BOP3P53958 YSP1YHR155W 3687 nt0.92□□□□□ -2.26
BOP3P53958 BEM3YPL115C 3387 nt0.91□□□□□ -2.26
BOP3P53958 YBR072C-AYBR072C-A 162 nt0.91□□□□□ -2.26
BOP3P53958 RPM2YML091C 3609 nt0.9□□□□□ -2.26
BOP3P53958 snR81snR81 201 nt0.9□□□□□ -2.27
BOP3P53958 YPL060C-AYPL060C-A 3315 nt0.89□□□□□ -2.27
BOP3P53958 ULP2YIL031W 3105 nt0.86□□□□□ -2.27
BOP3P53958 GLG1YKR058W 1851 nt0.86□□□□□ -2.27
BOP3P53958 tS(GCU)Q1tS(GCU)Q1 86 nt0.85□□□□□ -2.27
BOP3P53958 YDL247W-AYDL247W-A 75 nt0.82□□□□□ -2.28
BOP3P53958 YLL006W-AYLL006W-A 177 nt0.82□□□□□ -2.28
BOP3P53958 BUL2YML111W 2763 nt0.81□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms