Protein–RNA interactions for Protein: P53941

IMP4, U3 small nucleolar ribonucleoprotein protein IMP4, yeastyeast

Known RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IMP4P53941 YIL071W-AYIL071W-A 477 nt1.18□□□□□ -2.22
IMP4P53941 KAP122YGL016W 3246 nt1.18□□□□□ -2.22
IMP4P53941 BFR2YDR299W 1605 nt1.18□□□□□ -2.22
IMP4P53941 RSM22YKL155C 1887 nt1.18□□□□□ -2.22
IMP4P53941 TRM732YMR259C 4263 nt1.18□□□□□ -2.22
IMP4P53941 YBL109WYBL109W 336 nt1.17□□□□□ -2.22
IMP4P53941 VAM6YDL077C 3150 nt1.16□□□□□ -2.22
IMP4P53941 CHS6YJL099W 2241 nt1.16□□□□□ -2.22
IMP4P53941 SET3YKR029C 2256 nt1.16□□□□□ -2.22
IMP4P53941 YCR095W-AYCR095W-A 159 nt1.16□□□□□ -2.22
IMP4P53941 YDR524C-AYDR524C-A 120 nt1.16□□□□□ -2.22
IMP4P53941 PMP2YEL017C-A 132 nt1.16□□□□□ -2.22
IMP4P53941 YLR282CYLR282C 342 nt1.16□□□□□ -2.22
IMP4P53941 YBL039C-AYBL039C-A 84 nt1.16□□□□□ -2.22
IMP4P53941 STB6YKL072W 2301 nt1.16□□□□□ -2.22
IMP4P53941 ALY2YJL084C 3141 nt1.15□□□□□ -2.22
IMP4P53941 NUP188YML103C 4968 nt1.15□□□□□ -2.23
IMP4P53941 TAH1YCR060W 336 nt1.15□□□□□ -2.23
IMP4P53941 YNL103W-AYNL103W-A 90 nt1.15□□□□□ -2.23
IMP4P53941 YBR099CYBR099C 384 nt1.15□□□□□ -2.23
IMP4P53941 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
IMP4P53941 MSN5YDR335W 3675 nt1.14□□□□□ -2.23
IMP4P53941 EST2YLR318W 2655 nt1.13□□□□□ -2.23
IMP4P53941 WAR1YML076C 2835 nt1.13□□□□□ -2.23
IMP4P53941 UBP3YER151C 2739 nt1.13□□□□□ -2.23
IMP4P53941 QCR9YGR183C 201 nt1.13□□□□□ -2.23
IMP4P53941 YNL067W-BYNL067W-B 141 nt1.13□□□□□ -2.23
IMP4P53941 EAF1YDR359C 2949 nt1.12□□□□□ -2.23
IMP4P53941 TFB5YDR079C-A 219 nt1.12□□□□□ -2.23
IMP4P53941 YDR544CYDR544C 429 nt1.12□□□□□ -2.23
IMP4P53941 COX5BYIL111W 456 nt1.12□□□□□ -2.23
IMP4P53941 YLL020CYLL020C 306 nt1.12□□□□□ -2.23
IMP4P53941 snR39BsnR39B 96 nt1.12□□□□□ -2.23
IMP4P53941 PAN2YGL094C 3348 nt1.12□□□□□ -2.23
IMP4P53941 NOP9YJL010C 2001 nt1.11□□□□□ -2.23
IMP4P53941 OST4YDL232W 111 nt1.11□□□□□ -2.23
IMP4P53941 YML002WYML002W 2214 nt1.1□□□□□ -2.23
IMP4P53941 SOM1YEL059C-A 225 nt1.1□□□□□ -2.23
IMP4P53941 YHR131W-AYHR131W-A 246 nt1.1□□□□□ -2.23
IMP4P53941 YBR178WYBR178W 375 nt1.1□□□□□ -2.23
IMP4P53941 FYV10YIL097W 1551 nt1.09□□□□□ -2.23
IMP4P53941 NST1YNL091W 3723 nt1.09□□□□□ -2.23
IMP4P53941 APL3YBL037W 3078 nt1.09□□□□□ -2.23
IMP4P53941 tF(GAA)BtF(GAA)B 73 nt1.09□□□□□ -2.23
IMP4P53941 tF(GAA)FtF(GAA)F 73 nt1.09□□□□□ -2.23
IMP4P53941 tF(GAA)GtF(GAA)G 73 nt1.09□□□□□ -2.23
IMP4P53941 tF(GAA)H1tF(GAA)H1 73 nt1.09□□□□□ -2.23
IMP4P53941 tF(GAA)H2tF(GAA)H2 73 nt1.09□□□□□ -2.23
IMP4P53941 tF(GAA)MtF(GAA)M 73 nt1.09□□□□□ -2.23
IMP4P53941 tF(GAA)P1tF(GAA)P1 73 nt1.09□□□□□ -2.23
IMP4P53941 tF(GAA)P2tF(GAA)P2 73 nt1.09□□□□□ -2.23
IMP4P53941 DOP1YDR141C 5097 nt1.09□□□□□ -2.24
IMP4P53941 YKL100W-AYKL100W-A 90 nt1.08□□□□□ -2.24
IMP4P53941 snR190snR190 190 nt1.08□□□□□ -2.24
IMP4P53941 ASE1YOR058C 2658 nt1.08□□□□□ -2.24
IMP4P53941 CDC39YCR093W 6327 nt1.07□□□□□ -2.24
IMP4P53941 YBR200W-AYBR200W-A 165 nt1.05□□□□□ -2.24
IMP4P53941 SWI4YER111C 3282 nt1.05□□□□□ -2.24
IMP4P53941 AZF1YOR113W 2745 nt1.04□□□□□ -2.24
IMP4P53941 UTP20YBL004W 7482 nt1.04□□□□□ -2.24
IMP4P53941 RPL26BYGR034W 384 nt1.04□□□□□ -2.24
IMP4P53941 tM(CAU)Q2tM(CAU)Q2 78 nt1.03□□□□□ -2.24
IMP4P53941 YLR232WYLR232W 348 nt1.03□□□□□ -2.24
IMP4P53941 BEM2YER155C 6504 nt1.03□□□□□ -2.24
IMP4P53941 SCC2YDR180W 4482 nt1.03□□□□□ -2.25
IMP4P53941 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
IMP4P53941 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
IMP4P53941 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
IMP4P53941 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
IMP4P53941 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
IMP4P53941 YLR041WYLR041W 321 nt1.02□□□□□ -2.25
IMP4P53941 YMR326CYMR326C 309 nt1.02□□□□□ -2.25
IMP4P53941 ROM2YLR371W 4071 nt1.02□□□□□ -2.25
IMP4P53941 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
IMP4P53941 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
IMP4P53941 YDR210WYDR210W 228 nt1.01□□□□□ -2.25
IMP4P53941 RCO1YMR075W 2055 nt1□□□□□ -2.25
IMP4P53941 snR61snR61 90 nt0.99□□□□□ -2.25
IMP4P53941 tN(GUU)QtN(GUU)Q 71 nt0.98□□□□□ -2.25
IMP4P53941 YJL127W-AYJL127W-A 117 nt0.98□□□□□ -2.25
IMP4P53941 COG6YNL041C 2520 nt0.97□□□□□ -2.25
IMP4P53941 PRP16YKR086W 3216 nt0.97□□□□□ -2.25
IMP4P53941 YGL041C-BYGL041C-B 183 nt0.96□□□□□ -2.26
IMP4P53941 YHR217CYHR217C 462 nt0.95□□□□□ -2.26
IMP4P53941 SEC1YDR164C 2175 nt0.94□□□□□ -2.26
IMP4P53941 SEC3YER008C 4011 nt0.94□□□□□ -2.26
IMP4P53941 KAP120YPL125W 3099 nt0.94□□□□□ -2.26
IMP4P53941 YCS4YLR272C 3531 nt0.94□□□□□ -2.26
IMP4P53941 YDL073WYDL073W 2955 nt0.92□□□□□ -2.26
IMP4P53941 YIL142C-AYIL142C-A 333 nt0.92□□□□□ -2.26
IMP4P53941 YOL014WYOL014W 375 nt0.92□□□□□ -2.26
IMP4P53941 SEC8YPR055W 3198 nt0.91□□□□□ -2.26
IMP4P53941 BEM3YPL115C 3387 nt0.91□□□□□ -2.26
IMP4P53941 RKR1YMR247C 4689 nt0.9□□□□□ -2.27
IMP4P53941 YPR160W-AYPR160W-A 81 nt0.9□□□□□ -2.27
IMP4P53941 YMR160WYMR160W 2451 nt0.9□□□□□ -2.27
IMP4P53941 BIR1YJR089W 2865 nt0.88□□□□□ -2.27
IMP4P53941 YGR146C-AYGR146C-A 162 nt0.88□□□□□ -2.27
IMP4P53941 YLR399W-AYLR399W-A 105 nt0.87□□□□□ -2.27
IMP4P53941 YNL266WYNL266W 420 nt0.87□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms