Protein–RNA interactions for Protein: P47977

TIS11, mRNA decay factor CTH2, yeastyeast

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIS11P47977 YOR161W-AYOR161W-A 81 nt0.99□□□□□ -2.25
TIS11P47977 YBR200W-AYBR200W-A 165 nt0.99□□□□□ -2.25
TIS11P47977 NOP9YJL010C 2001 nt0.98□□□□□ -2.25
TIS11P47977 SNU13YEL026W 381 nt0.98□□□□□ -2.25
TIS11P47977 YLR282CYLR282C 342 nt0.97□□□□□ -2.25
TIS11P47977 COX5BYIL111W 456 nt0.96□□□□□ -2.26
TIS11P47977 YML002WYML002W 2214 nt0.95□□□□□ -2.26
TIS11P47977 RPL26BYGR034W 384 nt0.95□□□□□ -2.26
TIS11P47977 YOR314W-AYOR314W-A 111 nt0.95□□□□□ -2.26
TIS11P47977 NUP157YER105C 4176 nt0.95□□□□□ -2.26
TIS11P47977 BFR2YDR299W 1605 nt0.95□□□□□ -2.26
TIS11P47977 VAM6YDL077C 3150 nt0.94□□□□□ -2.26
TIS11P47977 YCS4YLR272C 3531 nt0.93□□□□□ -2.26
TIS11P47977 YJR029WYJR029W 5268 nt0.93□□□□□ -2.26
TIS11P47977 YPR137C-BYPR137C-B 5268 nt0.93□□□□□ -2.26
TIS11P47977 YFR012W-AYFR012W-A 87 nt0.93□□□□□ -2.26
TIS11P47977 YGL182CYGL182C 324 nt0.93□□□□□ -2.26
TIS11P47977 snR190snR190 190 nt0.93□□□□□ -2.26
TIS11P47977 STB6YKL072W 2301 nt0.93□□□□□ -2.26
TIS11P47977 SCC2YDR180W 4482 nt0.92□□□□□ -2.26
TIS11P47977 snR48snR48 113 nt0.92□□□□□ -2.26
TIS11P47977 FYV10YIL097W 1551 nt0.91□□□□□ -2.26
TIS11P47977 CHS6YJL099W 2241 nt0.9□□□□□ -2.27
TIS11P47977 CDC39YCR093W 6327 nt0.9□□□□□ -2.27
TIS11P47977 CLU1YMR012W 3834 nt0.9□□□□□ -2.27
TIS11P47977 TAH1YCR060W 336 nt0.89□□□□□ -2.27
TIS11P47977 YBL039C-AYBL039C-A 84 nt0.89□□□□□ -2.27
TIS11P47977 PAU24YBR301W 363 nt0.89□□□□□ -2.27
TIS11P47977 tL(UAA)QtL(UAA)Q 85 nt0.88□□□□□ -2.27
TIS11P47977 DOP1YDR141C 5097 nt0.88□□□□□ -2.27
TIS11P47977 PRP16YKR086W 3216 nt0.87□□□□□ -2.27
TIS11P47977 BUD3YCL014W 4911 nt0.86□□□□□ -2.27
TIS11P47977 YLR041WYLR041W 321 nt0.86□□□□□ -2.27
TIS11P47977 YLR232WYLR232W 348 nt0.86□□□□□ -2.27
TIS11P47977 ASE1YOR058C 2658 nt0.85□□□□□ -2.27
TIS11P47977 YOR329W-AYOR329W-A 210 nt0.85□□□□□ -2.27
TIS11P47977 SEC8YPR055W 3198 nt0.85□□□□□ -2.27
TIS11P47977 YPR117WYPR117W 7470 nt0.84□□□□□ -2.27
TIS11P47977 YDR544CYDR544C 429 nt0.84□□□□□ -2.27
TIS11P47977 YCL001W-BYCL001W-B 255 nt0.84□□□□□ -2.27
TIS11P47977 NST1YNL091W 3723 nt0.83□□□□□ -2.28
TIS11P47977 EMT1tM(CAU)D 73 nt0.83□□□□□ -2.28
TIS11P47977 EMT5tM(CAU)J1 73 nt0.83□□□□□ -2.28
TIS11P47977 EMT3tM(CAU)J2 73 nt0.83□□□□□ -2.28
TIS11P47977 EMT4tM(CAU)M 73 nt0.83□□□□□ -2.28
TIS11P47977 EMT2tM(CAU)O2 73 nt0.83□□□□□ -2.28
TIS11P47977 Q0143Q0143 153 nt0.83□□□□□ -2.28
TIS11P47977 QCR9YGR183C 201 nt0.83□□□□□ -2.28
TIS11P47977 KAP120YPL125W 3099 nt0.83□□□□□ -2.28
TIS11P47977 BEM3YPL115C 3387 nt0.82□□□□□ -2.28
TIS11P47977 tM(CAU)Q2tM(CAU)Q2 78 nt0.82□□□□□ -2.28
TIS11P47977 YNL067W-BYNL067W-B 141 nt0.82□□□□□ -2.28
TIS11P47977 YLR399W-AYLR399W-A 105 nt0.81□□□□□ -2.28
TIS11P47977 YHR131W-AYHR131W-A 246 nt0.8□□□□□ -2.28
TIS11P47977 YPR160W-AYPR160W-A 81 nt0.8□□□□□ -2.28
TIS11P47977 YNL205CYNL205C 423 nt0.79□□□□□ -2.28
TIS11P47977 YDL073WYDL073W 2955 nt0.78□□□□□ -2.28
TIS11P47977 tN(GUU)QtN(GUU)Q 71 nt0.78□□□□□ -2.28
TIS11P47977 snR85snR85 171 nt0.77□□□□□ -2.29
TIS11P47977 SOM1YEL059C-A 225 nt0.77□□□□□ -2.29
TIS11P47977 snR39BsnR39B 96 nt0.77□□□□□ -2.29
TIS11P47977 YCR095W-AYCR095W-A 159 nt0.76□□□□□ -2.29
TIS11P47977 OST4YDL232W 111 nt0.76□□□□□ -2.29
TIS11P47977 YIL142C-AYIL142C-A 333 nt0.76□□□□□ -2.29
TIS11P47977 UBP3YER151C 2739 nt0.76□□□□□ -2.29
TIS11P47977 YBR099CYBR099C 384 nt0.75□□□□□ -2.29
TIS11P47977 COG6YNL041C 2520 nt0.75□□□□□ -2.29
TIS11P47977 YDR210WYDR210W 228 nt0.74□□□□□ -2.29
TIS11P47977 YJL127W-AYJL127W-A 117 nt0.74□□□□□ -2.29
TIS11P47977 SEC1YDR164C 2175 nt0.73□□□□□ -2.29
TIS11P47977 STF2YGR008C 255 nt0.73□□□□□ -2.29
TIS11P47977 YSP1YHR155W 3687 nt0.73□□□□□ -2.29
TIS11P47977 YIL071W-AYIL071W-A 477 nt0.72□□□□□ -2.29
TIS11P47977 HUG1YML058W-A 207 nt0.72□□□□□ -2.29
TIS11P47977 YBR072C-AYBR072C-A 162 nt0.7□□□□□ -2.3
TIS11P47977 RKR1YMR247C 4689 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)BtT(AGU)B 73 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)CtT(AGU)C 73 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)DtT(AGU)D 73 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)HtT(AGU)H 73 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)I1tT(AGU)I1 73 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)I2tT(AGU)I2 73 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)JtT(AGU)J 73 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)N1tT(AGU)N1 73 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)N2tT(AGU)N2 73 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)O1tT(AGU)O1 73 nt0.69□□□□□ -2.3
TIS11P47977 tT(AGU)O2tT(AGU)O2 73 nt0.69□□□□□ -2.3
TIS11P47977 YGR146C-AYGR146C-A 162 nt0.68□□□□□ -2.3
TIS11P47977 PMP2YEL017C-A 132 nt0.67□□□□□ -2.3
TIS11P47977 GLG1YKR058W 1851 nt0.67□□□□□ -2.3
TIS11P47977 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
TIS11P47977 YLL006W-AYLL006W-A 177 nt0.65□□□□□ -2.31
TIS11P47977 ULP2YIL031W 3105 nt0.63□□□□□ -2.31
TIS11P47977 NNF2YGR089W 2811 nt0.63□□□□□ -2.31
TIS11P47977 CSE1YGL238W 2883 nt0.63□□□□□ -2.31
TIS11P47977 YNL103W-AYNL103W-A 90 nt0.62□□□□□ -2.31
TIS11P47977 BIR1YJR089W 2865 nt0.61□□□□□ -2.31
TIS11P47977 YOR192C-BYOR192C-B 5313 nt0.59□□□□□ -2.31
TIS11P47977 YNL266WYNL266W 420 nt0.59□□□□□ -2.31
TIS11P47977 RPM2YML091C 3609 nt0.58□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 71.4 ms