Protein–RNA interactions for Protein: P47050

RTT101, Cullin-8, yeastyeast

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTT101P47050 ASE1YOR058C 2658 nt1.04□□□□□ -2.24
RTT101P47050 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
RTT101P47050 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
RTT101P47050 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
RTT101P47050 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
RTT101P47050 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
RTT101P47050 RPL26BYGR034W 384 nt1.03□□□□□ -2.24
RTT101P47050 COX5BYIL111W 456 nt1.03□□□□□ -2.24
RTT101P47050 YPR117WYPR117W 7470 nt1.03□□□□□ -2.25
RTT101P47050 PRP42YDR235W 1635 nt1.02□□□□□ -2.25
RTT101P47050 snR190snR190 190 nt1.02□□□□□ -2.25
RTT101P47050 PRP5YBR237W 2550 nt1.02□□□□□ -2.25
RTT101P47050 BFR2YDR299W 1605 nt1.01□□□□□ -2.25
RTT101P47050 CLU1YMR012W 3834 nt1□□□□□ -2.25
RTT101P47050 SCC2YDR180W 4482 nt1□□□□□ -2.25
RTT101P47050 YDL007C-AYDL007C-A 258 nt1□□□□□ -2.25
RTT101P47050 YKL100W-AYKL100W-A 90 nt1□□□□□ -2.25
RTT101P47050 YBL053WYBL053W 375 nt1□□□□□ -2.25
RTT101P47050 YJR029WYJR029W 5268 nt1□□□□□ -2.25
RTT101P47050 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
RTT101P47050 YML002WYML002W 2214 nt1□□□□□ -2.25
RTT101P47050 UTP8YGR128C 2142 nt1□□□□□ -2.25
RTT101P47050 FYV10YIL097W 1551 nt0.97□□□□□ -2.25
RTT101P47050 YLR041WYLR041W 321 nt0.95□□□□□ -2.26
RTT101P47050 DOP1YDR141C 5097 nt0.95□□□□□ -2.26
RTT101P47050 KAP120YPL125W 3099 nt0.95□□□□□ -2.26
RTT101P47050 YGL182CYGL182C 324 nt0.93□□□□□ -2.26
RTT101P47050 YHL015W-AYHL015W-A 84 nt0.93□□□□□ -2.26
RTT101P47050 YBL039C-AYBL039C-A 84 nt0.93□□□□□ -2.26
RTT101P47050 SEC8YPR055W 3198 nt0.92□□□□□ -2.26
RTT101P47050 TAH1YCR060W 336 nt0.92□□□□□ -2.26
RTT101P47050 YOR102WYOR102W 351 nt0.92□□□□□ -2.26
RTT101P47050 Q0092Q0092 141 nt0.9□□□□□ -2.27
RTT101P47050 YPR160W-AYPR160W-A 81 nt0.9□□□□□ -2.27
RTT101P47050 PAU24YBR301W 363 nt0.9□□□□□ -2.27
RTT101P47050 PRP16YKR086W 3216 nt0.9□□□□□ -2.27
RTT101P47050 BUD3YCL014W 4911 nt0.9□□□□□ -2.27
RTT101P47050 tN(GUU)QtN(GUU)Q 71 nt0.89□□□□□ -2.27
RTT101P47050 YIL142C-AYIL142C-A 333 nt0.89□□□□□ -2.27
RTT101P47050 snR48snR48 113 nt0.88□□□□□ -2.27
RTT101P47050 ATP8Q0080 147 nt0.87□□□□□ -2.27
RTT101P47050 YDR544CYDR544C 429 nt0.87□□□□□ -2.27
RTT101P47050 tL(UAA)QtL(UAA)Q 85 nt0.87□□□□□ -2.27
RTT101P47050 YLR232WYLR232W 348 nt0.87□□□□□ -2.27
RTT101P47050 YLR399W-AYLR399W-A 105 nt0.87□□□□□ -2.27
RTT101P47050 YOR170WYOR170W 306 nt0.87□□□□□ -2.27
RTT101P47050 RKR1YMR247C 4689 nt0.87□□□□□ -2.27
RTT101P47050 YGR164WYGR164W 336 nt0.86□□□□□ -2.27
RTT101P47050 CHS6YJL099W 2241 nt0.85□□□□□ -2.27
RTT101P47050 YHR131W-AYHR131W-A 246 nt0.85□□□□□ -2.27
RTT101P47050 SNU13YEL026W 381 nt0.84□□□□□ -2.27
RTT101P47050 YNL170WYNL170W 396 nt0.84□□□□□ -2.27
RTT101P47050 YOR314W-AYOR314W-A 111 nt0.84□□□□□ -2.27
RTT101P47050 YOR329W-AYOR329W-A 210 nt0.84□□□□□ -2.27
RTT101P47050 UTP20YBL004W 7482 nt0.82□□□□□ -2.28
RTT101P47050 SDH6YDR379C-A 240 nt0.81□□□□□ -2.28
RTT101P47050 BEM3YPL115C 3387 nt0.81□□□□□ -2.28
RTT101P47050 OST4YDL232W 111 nt0.79□□□□□ -2.28
RTT101P47050 QCR9YGR183C 201 nt0.79□□□□□ -2.28
RTT101P47050 YDL073WYDL073W 2955 nt0.79□□□□□ -2.28
RTT101P47050 snR39BsnR39B 96 nt0.78□□□□□ -2.28
RTT101P47050 YMR160WYMR160W 2451 nt0.76□□□□□ -2.29
RTT101P47050 YSP1YHR155W 3687 nt0.76□□□□□ -2.29
RTT101P47050 COG6YNL041C 2520 nt0.76□□□□□ -2.29
RTT101P47050 tM(CAU)Q2tM(CAU)Q2 78 nt0.75□□□□□ -2.29
RTT101P47050 tF(GAA)BtF(GAA)B 73 nt0.74□□□□□ -2.29
RTT101P47050 tF(GAA)FtF(GAA)F 73 nt0.74□□□□□ -2.29
RTT101P47050 tF(GAA)GtF(GAA)G 73 nt0.74□□□□□ -2.29
RTT101P47050 tF(GAA)H1tF(GAA)H1 73 nt0.74□□□□□ -2.29
RTT101P47050 tF(GAA)H2tF(GAA)H2 73 nt0.74□□□□□ -2.29
RTT101P47050 tF(GAA)MtF(GAA)M 73 nt0.74□□□□□ -2.29
RTT101P47050 tF(GAA)P1tF(GAA)P1 73 nt0.74□□□□□ -2.29
RTT101P47050 tF(GAA)P2tF(GAA)P2 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
RTT101P47050 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
RTT101P47050 YNL067W-BYNL067W-B 141 nt0.74□□□□□ -2.29
RTT101P47050 SEC1YDR164C 2175 nt0.74□□□□□ -2.29
RTT101P47050 YDR210WYDR210W 228 nt0.73□□□□□ -2.29
RTT101P47050 YBR072C-AYBR072C-A 162 nt0.72□□□□□ -2.29
RTT101P47050 MYO1YHR023W 5787 nt0.72□□□□□ -2.29
RTT101P47050 YJL127W-AYJL127W-A 117 nt0.71□□□□□ -2.3
RTT101P47050 YCL001W-BYCL001W-B 255 nt0.71□□□□□ -2.3
RTT101P47050 YOR192C-BYOR192C-B 5313 nt0.69□□□□□ -2.3
RTT101P47050 PAU12YGR294W 363 nt0.69□□□□□ -2.3
RTT101P47050 NNF2YGR089W 2811 nt0.68□□□□□ -2.3
RTT101P47050 YLL006W-AYLL006W-A 177 nt0.68□□□□□ -2.3
RTT101P47050 GLG1YKR058W 1851 nt0.67□□□□□ -2.3
RTT101P47050 ULP2YIL031W 3105 nt0.65□□□□□ -2.3
RTT101P47050 YIL071W-AYIL071W-A 477 nt0.65□□□□□ -2.31
RTT101P47050 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
RTT101P47050 SOM1YEL059C-A 225 nt0.64□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 69.4 ms