Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 NUP157YER105C 4176 nt1.42□□□□□ -2.18
TY4A-JP47023 SEC8YPR055W 3198 nt1.41□□□□□ -2.18
TY4A-JP47023 TAH1YCR060W 336 nt1.41□□□□□ -2.18
TY4A-JP47023 BEM3YPL115C 3387 nt1.41□□□□□ -2.18
TY4A-JP47023 NUP192YJL039C 5052 nt1.4□□□□□ -2.19
TY4A-JP47023 YLR232WYLR232W 348 nt1.4□□□□□ -2.19
TY4A-JP47023 YFR012W-AYFR012W-A 87 nt1.38□□□□□ -2.19
TY4A-JP47023 YBL039C-AYBL039C-A 84 nt1.38□□□□□ -2.19
TY4A-JP47023 CAT8YMR280C 4302 nt1.37□□□□□ -2.19
TY4A-JP47023 Q0143Q0143 153 nt1.37□□□□□ -2.19
TY4A-JP47023 STB6YKL072W 2301 nt1.36□□□□□ -2.19
TY4A-JP47023 CDC39YCR093W 6327 nt1.35□□□□□ -2.19
TY4A-JP47023 tM(CAU)Q2tM(CAU)Q2 78 nt1.35□□□□□ -2.19
TY4A-JP47023 YLR399W-AYLR399W-A 105 nt1.35□□□□□ -2.19
TY4A-JP47023 YLR041WYLR041W 321 nt1.34□□□□□ -2.19
TY4A-JP47023 ASE1YOR058C 2658 nt1.34□□□□□ -2.2
TY4A-JP47023 YNL284C-BYNL284C-B 5268 nt1.34□□□□□ -2.2
TY4A-JP47023 tL(UAA)QtL(UAA)Q 85 nt1.33□□□□□ -2.2
TY4A-JP47023 YDL073WYDL073W 2955 nt1.33□□□□□ -2.2
TY4A-JP47023 tH(GUG)E1tH(GUG)E1 72 nt1.32□□□□□ -2.2
TY4A-JP47023 tH(GUG)E2tH(GUG)E2 72 nt1.32□□□□□ -2.2
TY4A-JP47023 tH(GUG)G1tH(GUG)G1 72 nt1.32□□□□□ -2.2
TY4A-JP47023 tH(GUG)G2tH(GUG)G2 72 nt1.32□□□□□ -2.2
TY4A-JP47023 tH(GUG)HtH(GUG)H 72 nt1.32□□□□□ -2.2
TY4A-JP47023 tH(GUG)KtH(GUG)K 72 nt1.32□□□□□ -2.2
TY4A-JP47023 tH(GUG)MtH(GUG)M 72 nt1.32□□□□□ -2.2
TY4A-JP47023 QCR9YGR183C 201 nt1.31□□□□□ -2.2
TY4A-JP47023 YOR329W-AYOR329W-A 210 nt1.31□□□□□ -2.2
TY4A-JP47023 YNL067W-BYNL067W-B 141 nt1.3□□□□□ -2.2
TY4A-JP47023 UBP3YER151C 2739 nt1.29□□□□□ -2.2
TY4A-JP47023 YHR131W-AYHR131W-A 246 nt1.29□□□□□ -2.2
TY4A-JP47023 YCL001W-BYCL001W-B 255 nt1.29□□□□□ -2.2
TY4A-JP47023 YDR544CYDR544C 429 nt1.27□□□□□ -2.21
TY4A-JP47023 YPR160W-AYPR160W-A 81 nt1.27□□□□□ -2.21
TY4A-JP47023 KAP120YPL125W 3099 nt1.26□□□□□ -2.21
TY4A-JP47023 snR39BsnR39B 96 nt1.25□□□□□ -2.21
TY4A-JP47023 YSP1YHR155W 3687 nt1.25□□□□□ -2.21
TY4A-JP47023 YCR095W-AYCR095W-A 159 nt1.24□□□□□ -2.21
TY4A-JP47023 SOM1YEL059C-A 225 nt1.24□□□□□ -2.21
TY4A-JP47023 YGR130CYGR130C 2451 nt1.23□□□□□ -2.21
TY4A-JP47023 YNL205CYNL205C 423 nt1.22□□□□□ -2.21
TY4A-JP47023 SPT7YBR081C 3999 nt1.22□□□□□ -2.21
TY4A-JP47023 snR85snR85 171 nt1.2□□□□□ -2.22
TY4A-JP47023 OST4YDL232W 111 nt1.2□□□□□ -2.22
TY4A-JP47023 YJL127W-AYJL127W-A 117 nt1.2□□□□□ -2.22
TY4A-JP47023 LAA1YJL207C 6045 nt1.2□□□□□ -2.22
TY4A-JP47023 EMT1tM(CAU)D 73 nt1.19□□□□□ -2.22
TY4A-JP47023 EMT5tM(CAU)J1 73 nt1.19□□□□□ -2.22
TY4A-JP47023 EMT3tM(CAU)J2 73 nt1.19□□□□□ -2.22
TY4A-JP47023 EMT4tM(CAU)M 73 nt1.19□□□□□ -2.22
TY4A-JP47023 EMT2tM(CAU)O2 73 nt1.19□□□□□ -2.22
TY4A-JP47023 YBR099CYBR099C 384 nt1.19□□□□□ -2.22
TY4A-JP47023 BUD3YCL014W 4911 nt1.19□□□□□ -2.22
TY4A-JP47023 COG6YNL041C 2520 nt1.18□□□□□ -2.22
TY4A-JP47023 VAM6YDL077C 3150 nt1.18□□□□□ -2.22
TY4A-JP47023 tN(GUU)QtN(GUU)Q 71 nt1.17□□□□□ -2.22
TY4A-JP47023 SCC2YDR180W 4482 nt1.16□□□□□ -2.22
TY4A-JP47023 YDR210WYDR210W 228 nt1.16□□□□□ -2.22
TY4A-JP47023 YIL071W-AYIL071W-A 477 nt1.16□□□□□ -2.22
TY4A-JP47023 YJR029WYJR029W 5268 nt1.15□□□□□ -2.23
TY4A-JP47023 YPR137C-BYPR137C-B 5268 nt1.15□□□□□ -2.23
TY4A-JP47023 RPM2YML091C 3609 nt1.14□□□□□ -2.23
TY4A-JP47023 YBR072C-AYBR072C-A 162 nt1.13□□□□□ -2.23
TY4A-JP47023 MSH3YCR092C 3057 nt1.13□□□□□ -2.23
TY4A-JP47023 tV(UAC)BtV(UAC)B 74 nt1.11□□□□□ -2.23
TY4A-JP47023 tV(UAC)DtV(UAC)D 74 nt1.11□□□□□ -2.23
TY4A-JP47023 HUG1YML058W-A 207 nt1.11□□□□□ -2.23
TY4A-JP47023 GLG1YKR058W 1851 nt1.1□□□□□ -2.23
TY4A-JP47023 YGR146C-AYGR146C-A 162 nt1.1□□□□□ -2.23
TY4A-JP47023 SIP4YJL089W 2490 nt1.1□□□□□ -2.23
TY4A-JP47023 STF2YGR008C 255 nt1.08□□□□□ -2.24
TY4A-JP47023 YPR117WYPR117W 7470 nt1.08□□□□□ -2.24
TY4A-JP47023 ULP2YIL031W 3105 nt1.07□□□□□ -2.24
TY4A-JP47023 MYO1YHR023W 5787 nt1.07□□□□□ -2.24
TY4A-JP47023 SEC1YDR164C 2175 nt1.04□□□□□ -2.24
TY4A-JP47023 PMP2YEL017C-A 132 nt1.04□□□□□ -2.24
TY4A-JP47023 YLL006W-AYLL006W-A 177 nt1.04□□□□□ -2.24
TY4A-JP47023 BEM2YER155C 6504 nt1.04□□□□□ -2.24
TY4A-JP47023 IML1YJR138W 4755 nt1.03□□□□□ -2.24
TY4A-JP47023 CSE1YGL238W 2883 nt1.03□□□□□ -2.24
TY4A-JP47023 LTE1YAL024C 4308 nt1.02□□□□□ -2.25
TY4A-JP47023 NNF2YGR089W 2811 nt1.02□□□□□ -2.25
TY4A-JP47023 RKR1YMR247C 4689 nt1□□□□□ -2.25
TY4A-JP47023 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
TY4A-JP47023 BIR1YJR089W 2865 nt0.95□□□□□ -2.26
TY4A-JP47023 YNL103W-AYNL103W-A 90 nt0.95□□□□□ -2.26
TY4A-JP47023 RCO1YMR075W 2055 nt0.95□□□□□ -2.26
TY4A-JP47023 YNL266WYNL266W 420 nt0.94□□□□□ -2.26
TY4A-JP47023 PET111YMR257C 2403 nt0.93□□□□□ -2.26
TY4A-JP47023 snR61snR61 90 nt0.9□□□□□ -2.27
TY4A-JP47023 YBL109WYBL109W 336 nt0.9□□□□□ -2.27
TY4A-JP47023 TFB5YDR079C-A 219 nt0.89□□□□□ -2.27
TY4A-JP47023 MLP1YKR095W 5628 nt0.88□□□□□ -2.27
TY4A-JP47023 YPR159C-AYPR159C-A 102 nt0.88□□□□□ -2.27
TY4A-JP47023 YBR178WYBR178W 375 nt0.87□□□□□ -2.27
TY4A-JP47023 YBR196C-AYBR196C-A 150 nt0.85□□□□□ -2.27
TY4A-JP47023 PAU24YBR301W 363 nt0.85□□□□□ -2.27
TY4A-JP47023 YPL060C-AYPL060C-A 3315 nt0.85□□□□□ -2.27
TY4A-JP47023 NIP1YMR309C 2439 nt0.85□□□□□ -2.27
TY4A-JP47023 YOR192C-BYOR192C-B 5313 nt0.85□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms