Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
SCD6P45978 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
SCD6P45978 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
SCD6P45978 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
SCD6P45978 YIL002W-AYIL002W-A 210 nt0.95□□□□□ -2.26
SCD6P45978 COX5BYIL111W 456 nt0.95□□□□□ -2.26
SCD6P45978 YER053C-AYER053C-A 114 nt0.94□□□□□ -2.26
SCD6P45978 snR46snR46 197 nt0.94□□□□□ -2.26
SCD6P45978 VAM6YDL077C 3150 nt0.94□□□□□ -2.26 RIP-Chip
SCD6P45978 YML002WYML002W 2214 nt0.93□□□□□ -2.26 RIP-Chip
SCD6P45978 BFR2YDR299W 1605 nt0.93□□□□□ -2.26
SCD6P45978 PMP1YCR024C-A 123 nt0.93□□□□□ -2.26
SCD6P45978 snR52snR52 92 nt0.93□□□□□ -2.26
SCD6P45978 SEC8YPR055W 3198 nt0.93□□□□□ -2.26 RIP-Chip
SCD6P45978 UTP20YBL004W 7482 nt0.92□□□□□ -2.26 RIP-Chip
SCD6P45978 YOL014WYOL014W 375 nt0.92□□□□□ -2.26 RIP-Chip
SCD6P45978 UTP8YGR128C 2142 nt0.91□□□□□ -2.26 RIP-Chip
SCD6P45978 BUD3YCL014W 4911 nt0.91□□□□□ -2.26
SCD6P45978 BIR1YJR089W 2865 nt0.9□□□□□ -2.26
SCD6P45978 BEM2YER155C 6504 nt0.9□□□□□ -2.27
SCD6P45978 YJL182CYJL182C 318 nt0.9□□□□□ -2.27
SCD6P45978 PRP16YKR086W 3216 nt0.9□□□□□ -2.27 RIP-Chip
SCD6P45978 YJL150WYJL150W 303 nt0.89□□□□□ -2.27
SCD6P45978 YLR342W-AYLR342W-A 174 nt0.89□□□□□ -2.27
SCD6P45978 FYV10YIL097W 1551 nt0.88□□□□□ -2.27 RIP-Chip
SCD6P45978 YEL073CYEL073C 324 nt0.88□□□□□ -2.27
SCD6P45978 YIL142C-AYIL142C-A 333 nt0.88□□□□□ -2.27
SCD6P45978 YLR399W-AYLR399W-A 105 nt0.88□□□□□ -2.27
SCD6P45978 PRP42YDR235W 1635 nt0.88□□□□□ -2.27 RIP-Chip
SCD6P45978 YPR117WYPR117W 7470 nt0.87□□□□□ -2.27
SCD6P45978 YLR041WYLR041W 321 nt0.87□□□□□ -2.27
SCD6P45978 YPR160W-AYPR160W-A 81 nt0.87□□□□□ -2.27
SCD6P45978 YNL198CYNL198C 303 nt0.86□□□□□ -2.27
SCD6P45978 SCC2YDR180W 4482 nt0.85□□□□□ -2.27 RIP-Chip
SCD6P45978 PRP5YBR237W 2550 nt0.85□□□□□ -2.27 RIP-Chip
SCD6P45978 YLR466C-BYLR466C-B 117 nt0.84□□□□□ -2.27
SCD6P45978 PRP39YML046W 1890 nt0.84□□□□□ -2.28
SCD6P45978 RKR1YMR247C 4689 nt0.82□□□□□ -2.28 RIP-Chip
SCD6P45978 YDL073WYDL073W 2955 nt0.82□□□□□ -2.28
SCD6P45978 TRS65YGR166W 1683 nt0.81□□□□□ -2.28
SCD6P45978 tN(GUU)QtN(GUU)Q 71 nt0.81□□□□□ -2.28
SCD6P45978 YGR151CYGR151C 336 nt0.81□□□□□ -2.28
SCD6P45978 BEM3YPL115C 3387 nt0.8□□□□□ -2.28 RIP-Chip
SCD6P45978 Q0032Q0032 291 nt0.8□□□□□ -2.28
SCD6P45978 CHS6YJL099W 2241 nt0.8□□□□□ -2.28 RIP-Chip
SCD6P45978 YGL007C-AYGL007C-A 87 nt0.78□□□□□ -2.28
SCD6P45978 YHR131W-AYHR131W-A 246 nt0.78□□□□□ -2.28
SCD6P45978 YMR160WYMR160W 2451 nt0.78□□□□□ -2.28
SCD6P45978 SEC1YDR164C 2175 nt0.77□□□□□ -2.29
SCD6P45978 YLR232WYLR232W 348 nt0.77□□□□□ -2.29
SCD6P45978 OST4YDL232W 111 nt0.76□□□□□ -2.29
SCD6P45978 SNU13YEL026W 381 nt0.76□□□□□ -2.29
SCD6P45978 YGL182CYGL182C 324 nt0.76□□□□□ -2.29
SCD6P45978 YBL039C-AYBL039C-A 84 nt0.76□□□□□ -2.29
SCD6P45978 YOR381W-AYOR381W-A 168 nt0.76□□□□□ -2.29
SCD6P45978 tT(AGU)BtT(AGU)B 73 nt0.75□□□□□ -2.29
SCD6P45978 tT(AGU)CtT(AGU)C 73 nt0.75□□□□□ -2.29
SCD6P45978 tT(AGU)DtT(AGU)D 73 nt0.75□□□□□ -2.29
SCD6P45978 tT(AGU)HtT(AGU)H 73 nt0.75□□□□□ -2.29
SCD6P45978 tT(AGU)I1tT(AGU)I1 73 nt0.75□□□□□ -2.29
SCD6P45978 tT(AGU)I2tT(AGU)I2 73 nt0.75□□□□□ -2.29
SCD6P45978 tT(AGU)JtT(AGU)J 73 nt0.75□□□□□ -2.29
SCD6P45978 tT(AGU)N1tT(AGU)N1 73 nt0.75□□□□□ -2.29
SCD6P45978 tT(AGU)N2tT(AGU)N2 73 nt0.75□□□□□ -2.29
SCD6P45978 tT(AGU)O1tT(AGU)O1 73 nt0.75□□□□□ -2.29
SCD6P45978 tT(AGU)O2tT(AGU)O2 73 nt0.75□□□□□ -2.29
SCD6P45978 YSP1YHR155W 3687 nt0.75□□□□□ -2.29
SCD6P45978 ULP2YIL031W 3105 nt0.74□□□□□ -2.29 RIP-Chip
SCD6P45978 YKL145W-AYKL145W-A 93 nt0.72□□□□□ -2.29
SCD6P45978 YOR225WYOR225W 330 nt0.72□□□□□ -2.29
SCD6P45978 YJL127W-AYJL127W-A 117 nt0.71□□□□□ -2.3
SCD6P45978 YNL338WYNL338W 159 nt0.71□□□□□ -2.3
SCD6P45978 YOR170WYOR170W 306 nt0.7□□□□□ -2.3
SCD6P45978 YDR544CYDR544C 429 nt0.69□□□□□ -2.3
SCD6P45978 YHL015W-AYHL015W-A 84 nt0.67□□□□□ -2.3
SCD6P45978 LTE1YAL024C 4308 nt0.66□□□□□ -2.3 RIP-Chip
SCD6P45978 snR48snR48 113 nt0.66□□□□□ -2.3
SCD6P45978 BUL2YML111W 2763 nt0.66□□□□□ -2.3 RIP-Chip
SCD6P45978 NNF2YGR089W 2811 nt0.65□□□□□ -2.3 RIP-Chip
SCD6P45978 YOR102WYOR102W 351 nt0.65□□□□□ -2.31
SCD6P45978 YBR072C-AYBR072C-A 162 nt0.64□□□□□ -2.31
SCD6P45978 YPR159C-AYPR159C-A 102 nt0.64□□□□□ -2.31
SCD6P45978 YLL006W-AYLL006W-A 177 nt0.63□□□□□ -2.31
SCD6P45978 COG6YNL041C 2520 nt0.63□□□□□ -2.31 RIP-Chip
SCD6P45978 PET111YMR257C 2403 nt0.63□□□□□ -2.31 RIP-Chip
SCD6P45978 YOR192C-BYOR192C-B 5313 nt0.62□□□□□ -2.31
SCD6P45978 YOR314W-AYOR314W-A 111 nt0.62□□□□□ -2.31
SCD6P45978 SDH6YDR379C-A 240 nt0.61□□□□□ -2.31
SCD6P45978 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
SCD6P45978 THO2YNL139C 4794 nt0.61□□□□□ -2.31 RIP-Chip
SCD6P45978 GLG1YKR058W 1851 nt0.61□□□□□ -2.31 RIP-Chip
SCD6P45978 tM(CAU)Q2tM(CAU)Q2 78 nt0.6□□□□□ -2.31
SCD6P45978 YLR294CYLR294C 330 nt0.6□□□□□ -2.31
SCD6P45978 YOR329W-AYOR329W-A 210 nt0.6□□□□□ -2.31
SCD6P45978 UTP10YJL109C 5310 nt0.6□□□□□ -2.31
SCD6P45978 RPM2YML091C 3609 nt0.6□□□□□ -2.31
SCD6P45978 tL(UAA)QtL(UAA)Q 85 nt0.58□□□□□ -2.32
SCD6P45978 YBL053WYBL053W 375 nt0.58□□□□□ -2.32
SCD6P45978 YDL007C-AYDL007C-A 258 nt0.57□□□□□ -2.32
SCD6P45978 NIP1YMR309C 2439 nt0.56□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 119.4 ms