Protein–RNA interactions for Protein: P40368

NUP82, Nucleoporin NUP82, yeastyeast

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP82P40368 YOR381W-AYOR381W-A 168 nt1.34□□□□□ -2.19
NUP82P40368 RAD9YDR217C 3930 nt1.34□□□□□ -2.2
NUP82P40368 PRP5YBR237W 2550 nt1.33□□□□□ -2.2
NUP82P40368 TRS65YGR166W 1683 nt1.31□□□□□ -2.2
NUP82P40368 YPR160W-AYPR160W-A 81 nt1.3□□□□□ -2.2
NUP82P40368 RPM2YML091C 3609 nt1.3□□□□□ -2.2
NUP82P40368 FYV10YIL097W 1551 nt1.3□□□□□ -2.2
NUP82P40368 YPR117WYPR117W 7470 nt1.29□□□□□ -2.2
NUP82P40368 SIP4YJL089W 2490 nt1.29□□□□□ -2.2
NUP82P40368 tV(UAC)BtV(UAC)B 74 nt1.28□□□□□ -2.2
NUP82P40368 tV(UAC)DtV(UAC)D 74 nt1.28□□□□□ -2.2
NUP82P40368 SCC2YDR180W 4482 nt1.26□□□□□ -2.21
NUP82P40368 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
NUP82P40368 YLR294CYLR294C 330 nt1.24□□□□□ -2.21
NUP82P40368 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
NUP82P40368 YNL338WYNL338W 159 nt1.23□□□□□ -2.21
NUP82P40368 YGL182CYGL182C 324 nt1.21□□□□□ -2.22
NUP82P40368 YHR131W-AYHR131W-A 246 nt1.2□□□□□ -2.22
NUP82P40368 YLR232WYLR232W 348 nt1.2□□□□□ -2.22
NUP82P40368 YSP1YHR155W 3687 nt1.19□□□□□ -2.22
NUP82P40368 UBP3YER151C 2739 nt1.19□□□□□ -2.22
NUP82P40368 LTE1YAL024C 4308 nt1.19□□□□□ -2.22
NUP82P40368 YDL073WYDL073W 2955 nt1.19□□□□□ -2.22
NUP82P40368 TAH1YCR060W 336 nt1.18□□□□□ -2.22
NUP82P40368 YBL039C-AYBL039C-A 84 nt1.18□□□□□ -2.22
NUP82P40368 YOR170WYOR170W 306 nt1.18□□□□□ -2.22
NUP82P40368 SNU13YEL026W 381 nt1.15□□□□□ -2.23
NUP82P40368 YHL015W-AYHL015W-A 84 nt1.14□□□□□ -2.23
NUP82P40368 snR48snR48 113 nt1.14□□□□□ -2.23
NUP82P40368 tN(GUU)QtN(GUU)Q 71 nt1.13□□□□□ -2.23
NUP82P40368 BEM3YPL115C 3387 nt1.13□□□□□ -2.23
NUP82P40368 OST4YDL232W 111 nt1.12□□□□□ -2.23
NUP82P40368 YOR102WYOR102W 351 nt1.12□□□□□ -2.23
NUP82P40368 CHS6YJL099W 2241 nt1.11□□□□□ -2.23
NUP82P40368 STF2YGR008C 255 nt1.1□□□□□ -2.23
NUP82P40368 BEM2YER155C 6504 nt1.09□□□□□ -2.24
NUP82P40368 YJR029WYJR029W 5268 nt1.09□□□□□ -2.24
NUP82P40368 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.24
NUP82P40368 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
NUP82P40368 HUG1YML058W-A 207 nt1.05□□□□□ -2.24
NUP82P40368 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
NUP82P40368 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
NUP82P40368 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
NUP82P40368 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
NUP82P40368 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
NUP82P40368 ULP2YIL031W 3105 nt1.03□□□□□ -2.24
NUP82P40368 YJL127W-AYJL127W-A 117 nt1.02□□□□□ -2.25
NUP82P40368 YOR314W-AYOR314W-A 111 nt1.02□□□□□ -2.25
NUP82P40368 RKR1YMR247C 4689 nt1.01□□□□□ -2.25
NUP82P40368 SEC1YDR164C 2175 nt1.01□□□□□ -2.25
NUP82P40368 YDL007C-AYDL007C-A 258 nt1□□□□□ -2.25
NUP82P40368 PAU24YBR301W 363 nt0.99□□□□□ -2.25
NUP82P40368 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
NUP82P40368 COG6YNL041C 2520 nt0.98□□□□□ -2.25
NUP82P40368 YDR544CYDR544C 429 nt0.98□□□□□ -2.25
NUP82P40368 tM(CAU)Q2tM(CAU)Q2 78 nt0.98□□□□□ -2.25
NUP82P40368 GLG1YKR058W 1851 nt0.98□□□□□ -2.25
NUP82P40368 BUD3YCL014W 4911 nt0.98□□□□□ -2.25
NUP82P40368 YBR072C-AYBR072C-A 162 nt0.97□□□□□ -2.25
NUP82P40368 tL(UAA)QtL(UAA)Q 85 nt0.96□□□□□ -2.26
NUP82P40368 NNF2YGR089W 2811 nt0.96□□□□□ -2.26
NUP82P40368 YIL142C-AYIL142C-A 333 nt0.95□□□□□ -2.26
NUP82P40368 YOR329W-AYOR329W-A 210 nt0.95□□□□□ -2.26
NUP82P40368 YBL053WYBL053W 375 nt0.94□□□□□ -2.26
NUP82P40368 YLL006W-AYLL006W-A 177 nt0.93□□□□□ -2.26
NUP82P40368 MLP1YKR095W 5628 nt0.92□□□□□ -2.26
NUP82P40368 QCR9YGR183C 201 nt0.92□□□□□ -2.26
NUP82P40368 IQG1YPL242C 4488 nt0.92□□□□□ -2.26
NUP82P40368 SDH6YDR379C-A 240 nt0.91□□□□□ -2.26
NUP82P40368 YGR164WYGR164W 336 nt0.9□□□□□ -2.27
NUP82P40368 PET111YMR257C 2403 nt0.89□□□□□ -2.27
NUP82P40368 snR39BsnR39B 96 nt0.88□□□□□ -2.27
NUP82P40368 YNL067W-BYNL067W-B 141 nt0.87□□□□□ -2.27
NUP82P40368 NIP1YMR309C 2439 nt0.85□□□□□ -2.27
NUP82P40368 YDR210WYDR210W 228 nt0.85□□□□□ -2.27
NUP82P40368 YGR146C-AYGR146C-A 162 nt0.84□□□□□ -2.27
NUP82P40368 YPR159C-AYPR159C-A 102 nt0.84□□□□□ -2.27
NUP82P40368 BUL2YML111W 2763 nt0.83□□□□□ -2.28
NUP82P40368 tT(AGU)BtT(AGU)B 73 nt0.82□□□□□ -2.28
NUP82P40368 tT(AGU)CtT(AGU)C 73 nt0.82□□□□□ -2.28
NUP82P40368 tT(AGU)DtT(AGU)D 73 nt0.82□□□□□ -2.28
NUP82P40368 tT(AGU)HtT(AGU)H 73 nt0.82□□□□□ -2.28
NUP82P40368 tT(AGU)I1tT(AGU)I1 73 nt0.82□□□□□ -2.28
NUP82P40368 tT(AGU)I2tT(AGU)I2 73 nt0.82□□□□□ -2.28
NUP82P40368 tT(AGU)JtT(AGU)J 73 nt0.82□□□□□ -2.28
NUP82P40368 tT(AGU)N1tT(AGU)N1 73 nt0.82□□□□□ -2.28
NUP82P40368 tT(AGU)N2tT(AGU)N2 73 nt0.82□□□□□ -2.28
NUP82P40368 tT(AGU)O1tT(AGU)O1 73 nt0.82□□□□□ -2.28
NUP82P40368 tT(AGU)O2tT(AGU)O2 73 nt0.82□□□□□ -2.28
NUP82P40368 PAU12YGR294W 363 nt0.8□□□□□ -2.28
NUP82P40368 UTP20YBL004W 7482 nt0.8□□□□□ -2.28
NUP82P40368 ATP8Q0080 147 nt0.79□□□□□ -2.28
NUP82P40368 RPS26AYGL189C 360 nt0.79□□□□□ -2.28
NUP82P40368 YOR192C-BYOR192C-B 5313 nt0.79□□□□□ -2.28
NUP82P40368 YMR160WYMR160W 2451 nt0.77□□□□□ -2.29
NUP82P40368 YDR371C-AYDR371C-A 105 nt0.76□□□□□ -2.29
NUP82P40368 YNL170WYNL170W 396 nt0.76□□□□□ -2.29
NUP82P40368 Q0092Q0092 141 nt0.75□□□□□ -2.29
NUP82P40368 CSE1YGL238W 2883 nt0.75□□□□□ -2.29
NUP82P40368 YCR095W-AYCR095W-A 159 nt0.74□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 61.7 ms