Protein–RNA interactions for Protein: P40032

TPA1, Prolyl 3,4-dihydroxylase TPA1, yeastyeast

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPA1P40032 BUD3YCL014W 4911 nt1.16□□□□□ -2.22
TPA1P40032 BFR2YDR299W 1605 nt1.16□□□□□ -2.22
TPA1P40032 COX5BYIL111W 456 nt1.16□□□□□ -2.22
TPA1P40032 YOR102WYOR102W 351 nt1.16□□□□□ -2.22
TPA1P40032 snR190snR190 190 nt1.16□□□□□ -2.22
TPA1P40032 YML002WYML002W 2214 nt1.16□□□□□ -2.22
TPA1P40032 YJR029WYJR029W 5268 nt1.15□□□□□ -2.22
TPA1P40032 YPR137C-BYPR137C-B 5268 nt1.15□□□□□ -2.22
TPA1P40032 RPL26BYGR034W 384 nt1.15□□□□□ -2.23
TPA1P40032 YGR164WYGR164W 336 nt1.15□□□□□ -2.23
TPA1P40032 tV(UAC)BtV(UAC)B 74 nt1.15□□□□□ -2.23
TPA1P40032 tV(UAC)DtV(UAC)D 74 nt1.15□□□□□ -2.23
TPA1P40032 FYV10YIL097W 1551 nt1.14□□□□□ -2.23
TPA1P40032 YKL100W-AYKL100W-A 90 nt1.14□□□□□ -2.23
TPA1P40032 ASE1YOR058C 2658 nt1.14□□□□□ -2.23
TPA1P40032 NST1YNL091W 3723 nt1.14□□□□□ -2.23
TPA1P40032 YGL182CYGL182C 324 nt1.12□□□□□ -2.23
TPA1P40032 SPT7YBR081C 3999 nt1.12□□□□□ -2.23
TPA1P40032 TAH1YCR060W 336 nt1.11□□□□□ -2.23
TPA1P40032 SDH6YDR379C-A 240 nt1.11□□□□□ -2.23
TPA1P40032 IML1YJR138W 4755 nt1.1□□□□□ -2.23
TPA1P40032 STF2YGR008C 255 nt1.1□□□□□ -2.23
TPA1P40032 HUG1YML058W-A 207 nt1.1□□□□□ -2.23
TPA1P40032 YBL039C-AYBL039C-A 84 nt1.1□□□□□ -2.23
TPA1P40032 tL(UAA)QtL(UAA)Q 85 nt1.09□□□□□ -2.23
TPA1P40032 YDR544CYDR544C 429 nt1.08□□□□□ -2.24
TPA1P40032 SIP4YJL089W 2490 nt1.07□□□□□ -2.24
TPA1P40032 YOR314W-AYOR314W-A 111 nt1.07□□□□□ -2.24
TPA1P40032 VAM6YDL077C 3150 nt1.07□□□□□ -2.24
TPA1P40032 PRP16YKR086W 3216 nt1.06□□□□□ -2.24
TPA1P40032 snR48snR48 113 nt1.06□□□□□ -2.24
TPA1P40032 MYO1YHR023W 5787 nt1.06□□□□□ -2.24
TPA1P40032 CHS6YJL099W 2241 nt1.05□□□□□ -2.24
TPA1P40032 YLR041WYLR041W 321 nt1.05□□□□□ -2.24
TPA1P40032 SCC2YDR180W 4482 nt1.05□□□□□ -2.24
TPA1P40032 KAP120YPL125W 3099 nt1.04□□□□□ -2.24
TPA1P40032 tN(GUU)QtN(GUU)Q 71 nt1.04□□□□□ -2.24
TPA1P40032 YOR329W-AYOR329W-A 210 nt1.04□□□□□ -2.24
TPA1P40032 SNU13YEL026W 381 nt1.03□□□□□ -2.24
TPA1P40032 YLR232WYLR232W 348 nt1.03□□□□□ -2.24
TPA1P40032 SEC8YPR055W 3198 nt1.02□□□□□ -2.25
TPA1P40032 RKR1YMR247C 4689 nt1□□□□□ -2.25
TPA1P40032 QCR9YGR183C 201 nt1□□□□□ -2.25
TPA1P40032 YPR160W-AYPR160W-A 81 nt1□□□□□ -2.25
TPA1P40032 BEM2YER155C 6504 nt0.98□□□□□ -2.25
TPA1P40032 YHR131W-AYHR131W-A 246 nt0.98□□□□□ -2.25
TPA1P40032 snR39BsnR39B 96 nt0.98□□□□□ -2.25
TPA1P40032 YCL001W-BYCL001W-B 255 nt0.98□□□□□ -2.25
TPA1P40032 BEM3YPL115C 3387 nt0.97□□□□□ -2.25
TPA1P40032 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
TPA1P40032 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
TPA1P40032 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
TPA1P40032 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
TPA1P40032 EMT2tM(CAU)O2 73 nt0.97□□□□□ -2.25
TPA1P40032 YPR117WYPR117W 7470 nt0.96□□□□□ -2.26
TPA1P40032 YLR399W-AYLR399W-A 105 nt0.96□□□□□ -2.26
TPA1P40032 YNL067W-BYNL067W-B 141 nt0.96□□□□□ -2.26
TPA1P40032 YDL073WYDL073W 2955 nt0.96□□□□□ -2.26
TPA1P40032 DOP1YDR141C 5097 nt0.95□□□□□ -2.26
TPA1P40032 tM(CAU)Q2tM(CAU)Q2 78 nt0.95□□□□□ -2.26
TPA1P40032 YDR210WYDR210W 228 nt0.91□□□□□ -2.26
TPA1P40032 COG6YNL041C 2520 nt0.91□□□□□ -2.26
TPA1P40032 UBP3YER151C 2739 nt0.9□□□□□ -2.27
TPA1P40032 OST4YDL232W 111 nt0.88□□□□□ -2.27
TPA1P40032 YIL071W-AYIL071W-A 477 nt0.88□□□□□ -2.27
TPA1P40032 LTE1YAL024C 4308 nt0.88□□□□□ -2.27
TPA1P40032 SEC1YDR164C 2175 nt0.87□□□□□ -2.27
TPA1P40032 SOM1YEL059C-A 225 nt0.86□□□□□ -2.27
TPA1P40032 YJL127W-AYJL127W-A 117 nt0.86□□□□□ -2.27
TPA1P40032 YBR072C-AYBR072C-A 162 nt0.86□□□□□ -2.27
TPA1P40032 YCR095W-AYCR095W-A 159 nt0.85□□□□□ -2.27
TPA1P40032 YSP1YHR155W 3687 nt0.84□□□□□ -2.27
TPA1P40032 YOR192C-BYOR192C-B 5313 nt0.84□□□□□ -2.28
TPA1P40032 YBR099CYBR099C 384 nt0.83□□□□□ -2.28
TPA1P40032 PAU24YBR301W 363 nt0.83□□□□□ -2.28
TPA1P40032 Q0143Q0143 153 nt0.82□□□□□ -2.28
TPA1P40032 YPR159C-AYPR159C-A 102 nt0.8□□□□□ -2.28
TPA1P40032 YLL006W-AYLL006W-A 177 nt0.79□□□□□ -2.28
TPA1P40032 YNL205CYNL205C 423 nt0.79□□□□□ -2.28
TPA1P40032 NNF2YGR089W 2811 nt0.78□□□□□ -2.28
TPA1P40032 GLG1YKR058W 1851 nt0.77□□□□□ -2.29
TPA1P40032 CSE1YGL238W 2883 nt0.77□□□□□ -2.29
TPA1P40032 tF(GAA)BtF(GAA)B 73 nt0.76□□□□□ -2.29
TPA1P40032 tF(GAA)FtF(GAA)F 73 nt0.76□□□□□ -2.29
TPA1P40032 tF(GAA)GtF(GAA)G 73 nt0.76□□□□□ -2.29
TPA1P40032 tF(GAA)H1tF(GAA)H1 73 nt0.76□□□□□ -2.29
TPA1P40032 tF(GAA)H2tF(GAA)H2 73 nt0.76□□□□□ -2.29
TPA1P40032 tF(GAA)MtF(GAA)M 73 nt0.76□□□□□ -2.29
TPA1P40032 tF(GAA)P1tF(GAA)P1 73 nt0.76□□□□□ -2.29
TPA1P40032 tF(GAA)P2tF(GAA)P2 73 nt0.76□□□□□ -2.29
TPA1P40032 YGR146C-AYGR146C-A 162 nt0.76□□□□□ -2.29
TPA1P40032 snR85snR85 171 nt0.74□□□□□ -2.29
TPA1P40032 PMP2YEL017C-A 132 nt0.74□□□□□ -2.29
TPA1P40032 PAU12YGR294W 363 nt0.74□□□□□ -2.29
TPA1P40032 YIL142C-AYIL142C-A 333 nt0.72□□□□□ -2.29
TPA1P40032 ULP2YIL031W 3105 nt0.72□□□□□ -2.29
TPA1P40032 PET111YMR257C 2403 nt0.7□□□□□ -2.3
TPA1P40032 BIR1YJR089W 2865 nt0.69□□□□□ -2.3
TPA1P40032 YNL103W-AYNL103W-A 90 nt0.68□□□□□ -2.3
TPA1P40032 NIP1YMR309C 2439 nt0.67□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 97.7 ms