Protein–RNA interactions for Protein: P38852

LIN1, Protein LIN1, yeastyeast

Predicted RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LIN1P38852 YOR072W-BYOR072W-B 162 nt0.15□□□□□ -2.39
LIN1P38852 YOR186C-AYOR186C-A 210 nt0.15□□□□□ -2.39
LIN1P38852 snR36snR36 182 nt0.15□□□□□ -2.39
LIN1P38852 YDR183C-AYDR183C-A 258 nt0.14□□□□□ -2.39
LIN1P38852 YMR193C-AYMR193C-A 387 nt0.14□□□□□ -2.39
LIN1P38852 TRS65YGR166W 1683 nt0.14□□□□□ -2.39
LIN1P38852 YDR366CYDR366C 399 nt0.13□□□□□ -2.39
LIN1P38852 AI1Q0050 2505 nt0.12□□□□□ -2.39
LIN1P38852 YBL100W-BYBL100W-B 5313 nt0.11□□□□□ -2.39
LIN1P38852 tF(GAA)BtF(GAA)B 73 nt0.11□□□□□ -2.39
LIN1P38852 tF(GAA)FtF(GAA)F 73 nt0.11□□□□□ -2.39
LIN1P38852 tF(GAA)GtF(GAA)G 73 nt0.11□□□□□ -2.39
LIN1P38852 tF(GAA)H1tF(GAA)H1 73 nt0.11□□□□□ -2.39
LIN1P38852 tF(GAA)H2tF(GAA)H2 73 nt0.11□□□□□ -2.39
LIN1P38852 tF(GAA)MtF(GAA)M 73 nt0.11□□□□□ -2.39
LIN1P38852 tF(GAA)P1tF(GAA)P1 73 nt0.11□□□□□ -2.39
LIN1P38852 tF(GAA)P2tF(GAA)P2 73 nt0.11□□□□□ -2.39
LIN1P38852 SNU13YEL026W 381 nt0.11□□□□□ -2.39
LIN1P38852 COX12YLR038C 252 nt0.11□□□□□ -2.39
LIN1P38852 YLR041WYLR041W 321 nt0.11□□□□□ -2.39
LIN1P38852 YDL240C-AYDL240C-A 138 nt0.08□□□□□ -2.4
LIN1P38852 ATP6Q0085 780 nt0.06□□□□□ -2.4
LIN1P38852 YGR069WYGR069W 336 nt0.06□□□□□ -2.4
LIN1P38852 YFL032WYFL032W 321 nt0.05□□□□□ -2.4
LIN1P38852 YKU70YMR284W 1809 nt0.05□□□□□ -2.4
LIN1P38852 YBR072C-AYBR072C-A 162 nt0.04□□□□□ -2.4
LIN1P38852 YER053C-AYER053C-A 114 nt0.01□□□□□ -2.41
LIN1P38852 YLR120W-AYLR120W-A 102 nt0.01□□□□□ -2.41
LIN1P38852 YOR015WYOR015W 360 nt0.01□□□□□ -2.41
LIN1P38852 YEL073CYEL073C 324 nt0□□□□□ -2.41
LIN1P38852 RPL39YJL189W 156 nt0□□□□□ -2.41
LIN1P38852 SOV1YMR066W 2697 nt-0□□□□□ -2.41
LIN1P38852 YOL014WYOL014W 375 nt-0.02□□□□□ -2.41
LIN1P38852 RAD61YDR014W 1944 nt-0.03□□□□□ -2.41
LIN1P38852 YDR413CYDR413C 576 nt-0.03□□□□□ -2.41
LIN1P38852 UTP8YGR128C 2142 nt-0.03□□□□□ -2.41
LIN1P38852 YKL118WYKL118W 312 nt-0.03□□□□□ -2.41
LIN1P38852 YLR232WYLR232W 348 nt-0.04□□□□□ -2.42
LIN1P38852 YIL002W-AYIL002W-A 210 nt-0.05□□□□□ -2.42
LIN1P38852 STE5YDR103W 2754 nt-0.06□□□□□ -2.42
LIN1P38852 HMRA1YCR097W 381 nt-0.06□□□□□ -2.42
LIN1P38852 YMR158W-BYMR158W-B 321 nt-0.06□□□□□ -2.42
LIN1P38852 CSE1YGL238W 2883 nt-0.06□□□□□ -2.42
LIN1P38852 GLG1YKR058W 1851 nt-0.07□□□□□ -2.42
LIN1P38852 YCR038W-AYCR038W-A 126 nt-0.07□□□□□ -2.42
LIN1P38852 YGL052WYGL052W 306 nt-0.07□□□□□ -2.42
LIN1P38852 snR74snR74 88 nt-0.08□□□□□ -2.42
LIN1P38852 YOR008C-AYOR008C-A 225 nt-0.08□□□□□ -2.42
LIN1P38852 GIM4YEL003W 336 nt-0.09□□□□□ -2.42
LIN1P38852 YER097WYER097W 330 nt-0.09□□□□□ -2.42
LIN1P38852 YMR172C-AYMR172C-A 384 nt-0.09□□□□□ -2.42
LIN1P38852 YER078W-AYER078W-A 165 nt-0.11□□□□□ -2.43
LIN1P38852 APQ12YIL040W 417 nt-0.12□□□□□ -2.43
LIN1P38852 QCR9YGR183C 201 nt-0.13□□□□□ -2.43
LIN1P38852 THO2YNL139C 4794 nt-0.14□□□□□ -2.43
LIN1P38852 SDH6YDR379C-A 240 nt-0.14□□□□□ -2.43
LIN1P38852 snR128snR128 126 nt-0.14□□□□□ -2.43
LIN1P38852 YBR099CYBR099C 384 nt-0.14□□□□□ -2.43
LIN1P38852 YHR175W-AYHR175W-A 150 nt-0.16□□□□□ -2.44
LIN1P38852 snR45snR45 172 nt-0.17□□□□□ -2.44
LIN1P38852 TAH1YCR060W 336 nt-0.19□□□□□ -2.44
LIN1P38852 PRP39YML046W 1890 nt-0.2□□□□□ -2.44
LIN1P38852 snR8snR8 190 nt-0.2□□□□□ -2.44
LIN1P38852 YIR030W-AYIR030W-A 384 nt-0.2□□□□□ -2.44
LIN1P38852 YDR544CYDR544C 429 nt-0.21□□□□□ -2.44
LIN1P38852 RPM2YML091C 3609 nt-0.22□□□□□ -2.44
LIN1P38852 snR56snR56 88 nt-0.23□□□□□ -2.45
LIN1P38852 YBR182C-AYBR182C-A 195 nt-0.23□□□□□ -2.45
LIN1P38852 EST1YLR233C 2100 nt-0.23□□□□□ -2.45
LIN1P38852 YNL277W-AYNL277W-A 189 nt-0.24□□□□□ -2.45
LIN1P38852 YPL060C-AYPL060C-A 3315 nt-0.25□□□□□ -2.45
LIN1P38852 COG6YNL041C 2520 nt-0.25□□□□□ -2.45
LIN1P38852 YDR210WYDR210W 228 nt-0.27□□□□□ -2.45
LIN1P38852 tR(ACG)Q2tR(ACG)Q2 74 nt-0.29□□□□□ -2.46
LIN1P38852 YGL041CYGL041C 204 nt-0.3□□□□□ -2.46
LIN1P38852 YML099W-AYML099W-A 330 nt-0.3□□□□□ -2.46
LIN1P38852 YBL039C-AYBL039C-A 84 nt-0.3□□□□□ -2.46
LIN1P38852 snR55snR55 98 nt-0.34□□□□□ -2.46
LIN1P38852 tF(GAA)QtF(GAA)Q 75 nt-0.34□□□□□ -2.46
LIN1P38852 SBH2YER019C-A 267 nt-0.34□□□□□ -2.46
LIN1P38852 YER181CYER181C 324 nt-0.35□□□□□ -2.47
LIN1P38852 YOR314W-AYOR314W-A 111 nt-0.36□□□□□ -2.47
LIN1P38852 TFB5YDR079C-A 219 nt-0.37□□□□□ -2.47
LIN1P38852 YGL182CYGL182C 324 nt-0.37□□□□□ -2.47
LIN1P38852 snR49snR49 165 nt-0.38□□□□□ -2.47
LIN1P38852 snR65snR65 100 nt-0.39□□□□□ -2.47
LIN1P38852 YPR010C-AYPR010C-A 219 nt-0.41□□□□□ -2.48
LIN1P38852 YGR164WYGR164W 336 nt-0.43□□□□□ -2.48
LIN1P38852 YBR131C-AYBR131C-A 90 nt-0.43□□□□□ -2.48
LIN1P38852 YOL155W-AYOL155W-A 135 nt-0.46□□□□□ -2.48
LIN1P38852 YEL014CYEL014C 306 nt-0.47□□□□□ -2.48
LIN1P38852 YJL182CYJL182C 318 nt-0.48□□□□□ -2.49
LIN1P38852 snR46snR46 197 nt-0.48□□□□□ -2.49
LIN1P38852 YJL077W-AYJL077W-A 87 nt-0.49□□□□□ -2.49
LIN1P38852 YDR524W-CYDR524W-C 90 nt-0.5□□□□□ -2.49
LIN1P38852 tM(CAU)Q2tM(CAU)Q2 78 nt-0.51□□□□□ -2.49
LIN1P38852 YOR381W-AYOR381W-A 168 nt-0.51□□□□□ -2.49
LIN1P38852 YPL152W-AYPL152W-A 99 nt-0.51□□□□□ -2.49
LIN1P38852 SEC10YLR166C 2616 nt-0.53□□□□□ -2.49
LIN1P38852 YIL071W-AYIL071W-A 477 nt-0.55□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 103.2 ms