Protein–RNA interactions for Protein: P38778

SMF2, Manganese transporter SMF2, yeastyeast

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMF2P38778 YCR022CYCR022C 345 nt0.44□□□□□ -2.34
SMF2P38778 PAU12YGR294W 363 nt0.44□□□□□ -2.34
SMF2P38778 FMP27YLR454W 7887 nt0.43□□□□□ -2.34
SMF2P38778 tF(GAA)BtF(GAA)B 73 nt0.43□□□□□ -2.34
SMF2P38778 tF(GAA)FtF(GAA)F 73 nt0.43□□□□□ -2.34
SMF2P38778 tF(GAA)GtF(GAA)G 73 nt0.43□□□□□ -2.34
SMF2P38778 tF(GAA)H1tF(GAA)H1 73 nt0.43□□□□□ -2.34
SMF2P38778 tF(GAA)H2tF(GAA)H2 73 nt0.43□□□□□ -2.34
SMF2P38778 tF(GAA)MtF(GAA)M 73 nt0.43□□□□□ -2.34
SMF2P38778 tF(GAA)P1tF(GAA)P1 73 nt0.43□□□□□ -2.34
SMF2P38778 tF(GAA)P2tF(GAA)P2 73 nt0.43□□□□□ -2.34
SMF2P38778 YGL123C-AYGL123C-A 231 nt0.43□□□□□ -2.34
SMF2P38778 YOR072W-BYOR072W-B 162 nt0.43□□□□□ -2.34
SMF2P38778 SBH1YER087C-B 249 nt0.42□□□□□ -2.34
SMF2P38778 MLP2YIL149C 5040 nt0.41□□□□□ -2.34
SMF2P38778 YKL100W-AYKL100W-A 90 nt0.41□□□□□ -2.34
SMF2P38778 YKL145W-AYKL145W-A 93 nt0.41□□□□□ -2.34
SMF2P38778 YLR041WYLR041W 321 nt0.41□□□□□ -2.34
SMF2P38778 YOR008C-AYOR008C-A 225 nt0.41□□□□□ -2.34
SMF2P38778 UTP20YBL004W 7482 nt0.41□□□□□ -2.34
SMF2P38778 COX12YLR038C 252 nt0.4□□□□□ -2.35
SMF2P38778 ULP2YIL031W 3105 nt0.39□□□□□ -2.35
SMF2P38778 BLI1YKL061W 342 nt0.39□□□□□ -2.35
SMF2P38778 snR65snR65 100 nt0.38□□□□□ -2.35
SMF2P38778 YER053C-AYER053C-A 114 nt0.37□□□□□ -2.35
SMF2P38778 Q0142Q0142 177 nt0.37□□□□□ -2.35
SMF2P38778 ORC3YLL004W 1851 nt0.35□□□□□ -2.35
SMF2P38778 BIR1YJR089W 2865 nt0.35□□□□□ -2.35
SMF2P38778 NNF2YGR089W 2811 nt0.34□□□□□ -2.35
SMF2P38778 RPS26AYGL189C 360 nt0.34□□□□□ -2.36
SMF2P38778 YIR030W-AYIR030W-A 384 nt0.34□□□□□ -2.36
SMF2P38778 ABF2YMR072W 552 nt0.34□□□□□ -2.36
SMF2P38778 YNL146WYNL146W 303 nt0.34□□□□□ -2.36
SMF2P38778 BUL2YML111W 2763 nt0.33□□□□□ -2.36
SMF2P38778 YDR371C-AYDR371C-A 105 nt0.33□□□□□ -2.36
SMF2P38778 tF(GAA)QtF(GAA)Q 75 nt0.33□□□□□ -2.36
SMF2P38778 YHR131W-AYHR131W-A 246 nt0.33□□□□□ -2.36
SMF2P38778 YCR038W-AYCR038W-A 126 nt0.32□□□□□ -2.36
SMF2P38778 YOR231C-AYOR231C-A 201 nt0.32□□□□□ -2.36
SMF2P38778 SNU13YEL026W 381 nt0.31□□□□□ -2.36
SMF2P38778 YIL002W-AYIL002W-A 210 nt0.31□□□□□ -2.36
SMF2P38778 YPL152W-AYPL152W-A 99 nt0.31□□□□□ -2.36
SMF2P38778 NIP1YMR309C 2439 nt0.3□□□□□ -2.36
SMF2P38778 YDR366CYDR366C 399 nt0.3□□□□□ -2.36
SMF2P38778 ESP1YGR098C 4893 nt0.3□□□□□ -2.36
SMF2P38778 QCR9YGR183C 201 nt0.29□□□□□ -2.36
SMF2P38778 RCO1YMR075W 2055 nt0.28□□□□□ -2.36
SMF2P38778 TRS65YGR166W 1683 nt0.28□□□□□ -2.36
SMF2P38778 YOL014WYOL014W 375 nt0.28□□□□□ -2.36
SMF2P38778 YBR182C-AYBR182C-A 195 nt0.28□□□□□ -2.36
SMF2P38778 YKU70YMR284W 1809 nt0.27□□□□□ -2.37
SMF2P38778 YLL006W-AYLL006W-A 177 nt0.27□□□□□ -2.37
SMF2P38778 snR49snR49 165 nt0.27□□□□□ -2.37
SMF2P38778 AI1Q0050 2505 nt0.26□□□□□ -2.37
SMF2P38778 APQ12YIL040W 417 nt0.26□□□□□ -2.37
SMF2P38778 YGL041CYGL041C 204 nt0.24□□□□□ -2.37
SMF2P38778 snR55snR55 98 nt0.23□□□□□ -2.37
SMF2P38778 YER181CYER181C 324 nt0.23□□□□□ -2.37
SMF2P38778 YBL100W-BYBL100W-B 5313 nt0.23□□□□□ -2.37
SMF2P38778 YOR186C-AYOR186C-A 210 nt0.22□□□□□ -2.37
SMF2P38778 YBR072C-AYBR072C-A 162 nt0.22□□□□□ -2.37
SMF2P38778 YBR131C-AYBR131C-A 90 nt0.22□□□□□ -2.37
SMF2P38778 YOL013W-AYOL013W-A 192 nt0.21□□□□□ -2.38
SMF2P38778 PRP39YML046W 1890 nt0.2□□□□□ -2.38
SMF2P38778 YEL073CYEL073C 324 nt0.2□□□□□ -2.38
SMF2P38778 YNL054W-BYNL054W-B 5250 nt0.2□□□□□ -2.38
SMF2P38778 YLR232WYLR232W 348 nt0.19□□□□□ -2.38
SMF2P38778 YOL155W-AYOL155W-A 135 nt0.19□□□□□ -2.38
SMF2P38778 YNL097C-BYNL097C-B 123 nt0.18□□□□□ -2.38
SMF2P38778 YOR302WYOR302W 78 nt0.18□□□□□ -2.38
SMF2P38778 TAH1YCR060W 336 nt0.17□□□□□ -2.38
SMF2P38778 UTP8YGR128C 2142 nt0.17□□□□□ -2.38
SMF2P38778 SDH6YDR379C-A 240 nt0.16□□□□□ -2.38
SMF2P38778 YDR544CYDR544C 429 nt0.15□□□□□ -2.39
SMF2P38778 YML099W-AYML099W-A 330 nt0.15□□□□□ -2.39
SMF2P38778 YBL039C-AYBL039C-A 84 nt0.15□□□□□ -2.39
SMF2P38778 YMR158W-BYMR158W-B 321 nt0.15□□□□□ -2.39
SMF2P38778 YGL188C-AYGL188C-A 141 nt0.14□□□□□ -2.39
SMF2P38778 snR80snR80 171 nt0.13□□□□□ -2.39
SMF2P38778 YEL014CYEL014C 306 nt0.13□□□□□ -2.39
SMF2P38778 GLG1YKR058W 1851 nt0.12□□□□□ -2.39
SMF2P38778 SOV1YMR066W 2697 nt0.12□□□□□ -2.39
SMF2P38778 YJL182CYJL182C 318 nt0.11□□□□□ -2.39
SMF2P38778 RPM2YML091C 3609 nt0.1□□□□□ -2.39
SMF2P38778 COG6YNL041C 2520 nt0.1□□□□□ -2.39
SMF2P38778 YGL182CYGL182C 324 nt0.09□□□□□ -2.4
SMF2P38778 YPL060C-AYPL060C-A 3315 nt0.06□□□□□ -2.4
SMF2P38778 CSE1YGL238W 2883 nt0.05□□□□□ -2.4
SMF2P38778 YBR099CYBR099C 384 nt0.05□□□□□ -2.4
SMF2P38778 THO2YNL139C 4794 nt0.05□□□□□ -2.4
SMF2P38778 YER078W-AYER078W-A 165 nt0.04□□□□□ -2.4
SMF2P38778 YOR314W-AYOR314W-A 111 nt0.04□□□□□ -2.4
SMF2P38778 YOR381W-AYOR381W-A 168 nt0.01□□□□□ -2.41
SMF2P38778 snR8snR8 190 nt-0.02□□□□□ -2.41
SMF2P38778 snR46snR46 197 nt-0.02□□□□□ -2.41
SMF2P38778 EST1YLR233C 2100 nt-0.02□□□□□ -2.41
SMF2P38778 YOR170WYOR170W 306 nt-0.03□□□□□ -2.41
SMF2P38778 YDR210WYDR210W 228 nt-0.06□□□□□ -2.42
SMF2P38778 snR128snR128 126 nt-0.09□□□□□ -2.42
SMF2P38778 snR52snR52 92 nt-0.09□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms