Protein–RNA interactions for Protein: P38712

RRP3, ATP-dependent rRNA helicase RRP3, yeastyeast

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP3P38712 YLR282CYLR282C 342 nt1.07□□□□□ -2.24
RRP3P38712 YBL053WYBL053W 375 nt1.07□□□□□ -2.24
RRP3P38712 BFR2YDR299W 1605 nt1.07□□□□□ -2.24
RRP3P38712 ROM2YLR371W 4071 nt1.05□□□□□ -2.24
RRP3P38712 COX5BYIL111W 456 nt1.05□□□□□ -2.24
RRP3P38712 YOR381W-AYOR381W-A 168 nt1.05□□□□□ -2.24
RRP3P38712 snR190snR190 190 nt1.04□□□□□ -2.24
RRP3P38712 SPT7YBR081C 3999 nt1.04□□□□□ -2.24
RRP3P38712 YEL073CYEL073C 324 nt1.03□□□□□ -2.24
RRP3P38712 CLU1YMR012W 3834 nt1.03□□□□□ -2.25
RRP3P38712 PRP42YDR235W 1635 nt1.01□□□□□ -2.25
RRP3P38712 YDL007C-AYDL007C-A 258 nt1.01□□□□□ -2.25
RRP3P38712 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
RRP3P38712 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
RRP3P38712 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
RRP3P38712 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
RRP3P38712 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
RRP3P38712 NST1YNL091W 3723 nt1.01□□□□□ -2.25
RRP3P38712 RKR1YMR247C 4689 nt1□□□□□ -2.25
RRP3P38712 RPL26BYGR034W 384 nt1□□□□□ -2.25
RRP3P38712 CHS6YJL099W 2241 nt0.98□□□□□ -2.25
RRP3P38712 PRP5YBR237W 2550 nt0.98□□□□□ -2.25
RRP3P38712 tN(GUU)QtN(GUU)Q 71 nt0.97□□□□□ -2.25
RRP3P38712 PAU12YGR294W 363 nt0.97□□□□□ -2.25
RRP3P38712 YBL039C-AYBL039C-A 84 nt0.97□□□□□ -2.25
RRP3P38712 YPR160W-AYPR160W-A 81 nt0.97□□□□□ -2.25
RRP3P38712 PAU24YBR301W 363 nt0.97□□□□□ -2.25
RRP3P38712 FYV10YIL097W 1551 nt0.96□□□□□ -2.26
RRP3P38712 YML002WYML002W 2214 nt0.96□□□□□ -2.26
RRP3P38712 YGL182CYGL182C 324 nt0.94□□□□□ -2.26
RRP3P38712 BEM2YER155C 6504 nt0.94□□□□□ -2.26
RRP3P38712 SMC1YFL008W 3678 nt0.94□□□□□ -2.26
RRP3P38712 YPL060C-AYPL060C-A 3315 nt0.92□□□□□ -2.26
RRP3P38712 YKL100W-AYKL100W-A 90 nt0.92□□□□□ -2.26
RRP3P38712 snR48snR48 113 nt0.92□□□□□ -2.26
RRP3P38712 SEC8YPR055W 3198 nt0.92□□□□□ -2.26
RRP3P38712 YPR117WYPR117W 7470 nt0.91□□□□□ -2.26
RRP3P38712 TAH1YCR060W 336 nt0.91□□□□□ -2.26
RRP3P38712 tF(GAA)BtF(GAA)B 73 nt0.91□□□□□ -2.26
RRP3P38712 tF(GAA)FtF(GAA)F 73 nt0.91□□□□□ -2.26
RRP3P38712 tF(GAA)GtF(GAA)G 73 nt0.91□□□□□ -2.26
RRP3P38712 tF(GAA)H1tF(GAA)H1 73 nt0.91□□□□□ -2.26
RRP3P38712 tF(GAA)H2tF(GAA)H2 73 nt0.91□□□□□ -2.26
RRP3P38712 tF(GAA)MtF(GAA)M 73 nt0.91□□□□□ -2.26
RRP3P38712 tF(GAA)P1tF(GAA)P1 73 nt0.91□□□□□ -2.26
RRP3P38712 tF(GAA)P2tF(GAA)P2 73 nt0.91□□□□□ -2.26
RRP3P38712 tL(UAA)QtL(UAA)Q 85 nt0.91□□□□□ -2.26
RRP3P38712 SCC2YDR180W 4482 nt0.91□□□□□ -2.26
RRP3P38712 DOP1YDR141C 5097 nt0.89□□□□□ -2.27
RRP3P38712 COG6YNL041C 2520 nt0.88□□□□□ -2.27
RRP3P38712 QCR9YGR183C 201 nt0.88□□□□□ -2.27
RRP3P38712 YLR399W-AYLR399W-A 105 nt0.88□□□□□ -2.27
RRP3P38712 YOR170WYOR170W 306 nt0.88□□□□□ -2.27
RRP3P38712 YHR131W-AYHR131W-A 246 nt0.87□□□□□ -2.27
RRP3P38712 OST4YDL232W 111 nt0.86□□□□□ -2.27
RRP3P38712 YOR102WYOR102W 351 nt0.86□□□□□ -2.27
RRP3P38712 snR39BsnR39B 96 nt0.86□□□□□ -2.27
RRP3P38712 UTP8YGR128C 2142 nt0.83□□□□□ -2.28
RRP3P38712 YDR544CYDR544C 429 nt0.83□□□□□ -2.28
RRP3P38712 SNU13YEL026W 381 nt0.83□□□□□ -2.28
RRP3P38712 YIL142C-AYIL142C-A 333 nt0.83□□□□□ -2.28
RRP3P38712 YOR329W-AYOR329W-A 210 nt0.83□□□□□ -2.28
RRP3P38712 SEC1YDR164C 2175 nt0.83□□□□□ -2.28
RRP3P38712 UBP3YER151C 2739 nt0.82□□□□□ -2.28
RRP3P38712 ATP8Q0080 147 nt0.82□□□□□ -2.28
RRP3P38712 YLR232WYLR232W 348 nt0.82□□□□□ -2.28
RRP3P38712 LTE1YAL024C 4308 nt0.82□□□□□ -2.28
RRP3P38712 BUL2YML111W 2763 nt0.81□□□□□ -2.28
RRP3P38712 Q0092Q0092 141 nt0.81□□□□□ -2.28
RRP3P38712 YGR164WYGR164W 336 nt0.8□□□□□ -2.28
RRP3P38712 YHL015W-AYHL015W-A 84 nt0.8□□□□□ -2.28
RRP3P38712 YOR314W-AYOR314W-A 111 nt0.79□□□□□ -2.28
RRP3P38712 SDH6YDR379C-A 240 nt0.78□□□□□ -2.28
RRP3P38712 YNL170WYNL170W 396 nt0.77□□□□□ -2.29
RRP3P38712 YOL014WYOL014W 375 nt0.76□□□□□ -2.29
RRP3P38712 YMR160WYMR160W 2451 nt0.76□□□□□ -2.29
RRP3P38712 UTP20YBL004W 7482 nt0.75□□□□□ -2.29
RRP3P38712 YNL054W-BYNL054W-B 5250 nt0.75□□□□□ -2.29
RRP3P38712 YDR210WYDR210W 228 nt0.75□□□□□ -2.29
RRP3P38712 YSP1YHR155W 3687 nt0.75□□□□□ -2.29
RRP3P38712 RPM2YML091C 3609 nt0.75□□□□□ -2.29
RRP3P38712 YOR192C-BYOR192C-B 5313 nt0.74□□□□□ -2.29
RRP3P38712 YIL071W-AYIL071W-A 477 nt0.73□□□□□ -2.29
RRP3P38712 YKL145W-AYKL145W-A 93 nt0.73□□□□□ -2.29
RRP3P38712 ULP2YIL031W 3105 nt0.73□□□□□ -2.29
RRP3P38712 YJL127W-AYJL127W-A 117 nt0.72□□□□□ -2.29
RRP3P38712 NNF2YGR089W 2811 nt0.71□□□□□ -2.3
RRP3P38712 YMR272W-AYMR272W-A 114 nt0.69□□□□□ -2.3
RRP3P38712 tT(AGU)BtT(AGU)B 73 nt0.68□□□□□ -2.3
RRP3P38712 tT(AGU)CtT(AGU)C 73 nt0.68□□□□□ -2.3
RRP3P38712 tT(AGU)DtT(AGU)D 73 nt0.68□□□□□ -2.3
RRP3P38712 tT(AGU)HtT(AGU)H 73 nt0.68□□□□□ -2.3
RRP3P38712 tT(AGU)I1tT(AGU)I1 73 nt0.68□□□□□ -2.3
RRP3P38712 tT(AGU)I2tT(AGU)I2 73 nt0.68□□□□□ -2.3
RRP3P38712 tT(AGU)JtT(AGU)J 73 nt0.68□□□□□ -2.3
RRP3P38712 tT(AGU)N1tT(AGU)N1 73 nt0.68□□□□□ -2.3
RRP3P38712 tT(AGU)N2tT(AGU)N2 73 nt0.68□□□□□ -2.3
RRP3P38712 tT(AGU)O1tT(AGU)O1 73 nt0.68□□□□□ -2.3
RRP3P38712 tT(AGU)O2tT(AGU)O2 73 nt0.68□□□□□ -2.3
RRP3P38712 YNL067W-BYNL067W-B 141 nt0.68□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 9.3 ms