Protein–RNA interactions for Protein: P38708

YHR020W, Putative proline--tRNA ligase YHR020W, yeastyeast

Known RBP Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YHR020WP38708 CDC39YCR093W 6327 nt1.38□□□□□ -2.19
YHR020WP38708 ATP8Q0080 147 nt1.38□□□□□ -2.19
YHR020WP38708 TAH1YCR060W 336 nt1.37□□□□□ -2.19
YHR020WP38708 BEM3YPL115C 3387 nt1.37□□□□□ -2.19
YHR020WP38708 RAD9YDR217C 3930 nt1.36□□□□□ -2.19
YHR020WP38708 YLR232WYLR232W 348 nt1.36□□□□□ -2.19
YHR020WP38708 YOR314W-AYOR314W-A 111 nt1.36□□□□□ -2.19
YHR020WP38708 snR48snR48 113 nt1.36□□□□□ -2.19
YHR020WP38708 LAA1YJL207C 6045 nt1.35□□□□□ -2.19
YHR020WP38708 YGR164WYGR164W 336 nt1.35□□□□□ -2.19
YHR020WP38708 YBL039C-AYBL039C-A 84 nt1.35□□□□□ -2.19
YHR020WP38708 YIL020C-AYIL020C-A 339 nt1.34□□□□□ -2.19
YHR020WP38708 ASE1YOR058C 2658 nt1.34□□□□□ -2.2
YHR020WP38708 CHS6YJL099W 2241 nt1.34□□□□□ -2.2
YHR020WP38708 YNL170WYNL170W 396 nt1.33□□□□□ -2.2
YHR020WP38708 YPR160W-AYPR160W-A 81 nt1.33□□□□□ -2.2
YHR020WP38708 KAP120YPL125W 3099 nt1.33□□□□□ -2.2
YHR020WP38708 YGR130CYGR130C 2451 nt1.32□□□□□ -2.2
YHR020WP38708 NST1YNL091W 3723 nt1.3□□□□□ -2.2
YHR020WP38708 UBP3YER151C 2739 nt1.3□□□□□ -2.2
YHR020WP38708 YHR131W-AYHR131W-A 246 nt1.3□□□□□ -2.2
YHR020WP38708 YDL073WYDL073W 2955 nt1.29□□□□□ -2.2
YHR020WP38708 SPT7YBR081C 3999 nt1.29□□□□□ -2.2
YHR020WP38708 YBL053WYBL053W 375 nt1.28□□□□□ -2.2
YHR020WP38708 YNL284C-BYNL284C-B 5268 nt1.28□□□□□ -2.2
YHR020WP38708 tH(GUG)E1tH(GUG)E1 72 nt1.27□□□□□ -2.21
YHR020WP38708 tH(GUG)E2tH(GUG)E2 72 nt1.27□□□□□ -2.21
YHR020WP38708 tH(GUG)G1tH(GUG)G1 72 nt1.27□□□□□ -2.21
YHR020WP38708 tH(GUG)G2tH(GUG)G2 72 nt1.27□□□□□ -2.21
YHR020WP38708 tH(GUG)HtH(GUG)H 72 nt1.27□□□□□ -2.21
YHR020WP38708 tH(GUG)KtH(GUG)K 72 nt1.27□□□□□ -2.21
YHR020WP38708 tH(GUG)MtH(GUG)M 72 nt1.27□□□□□ -2.21
YHR020WP38708 SDH6YDR379C-A 240 nt1.26□□□□□ -2.21
YHR020WP38708 YSP1YHR155W 3687 nt1.26□□□□□ -2.21
YHR020WP38708 tM(CAU)Q2tM(CAU)Q2 78 nt1.23□□□□□ -2.21
YHR020WP38708 tN(GUU)QtN(GUU)Q 71 nt1.22□□□□□ -2.21
YHR020WP38708 tL(UAA)QtL(UAA)Q 85 nt1.21□□□□□ -2.22
YHR020WP38708 YOR329W-AYOR329W-A 210 nt1.21□□□□□ -2.22
YHR020WP38708 SCC2YDR180W 4482 nt1.21□□□□□ -2.22
YHR020WP38708 YDR544CYDR544C 429 nt1.2□□□□□ -2.22
YHR020WP38708 IML1YJR138W 4755 nt1.2□□□□□ -2.22
YHR020WP38708 QCR9YGR183C 201 nt1.18□□□□□ -2.22
YHR020WP38708 RPM2YML091C 3609 nt1.17□□□□□ -2.22
YHR020WP38708 YNL067W-BYNL067W-B 141 nt1.16□□□□□ -2.22
YHR020WP38708 BUD3YCL014W 4911 nt1.15□□□□□ -2.23
YHR020WP38708 YPR117WYPR117W 7470 nt1.14□□□□□ -2.23
YHR020WP38708 OST4YDL232W 111 nt1.14□□□□□ -2.23
YHR020WP38708 COG6YNL041C 2520 nt1.14□□□□□ -2.23
YHR020WP38708 SIP4YJL089W 2490 nt1.13□□□□□ -2.23
YHR020WP38708 tV(UAC)BtV(UAC)B 74 nt1.13□□□□□ -2.23
YHR020WP38708 tV(UAC)DtV(UAC)D 74 nt1.13□□□□□ -2.23
YHR020WP38708 snR39BsnR39B 96 nt1.13□□□□□ -2.23
YHR020WP38708 YJR029WYJR029W 5268 nt1.13□□□□□ -2.23
YHR020WP38708 YPR137C-BYPR137C-B 5268 nt1.13□□□□□ -2.23
YHR020WP38708 VAM6YDL077C 3150 nt1.13□□□□□ -2.23
YHR020WP38708 EMT1tM(CAU)D 73 nt1.1□□□□□ -2.23
YHR020WP38708 EMT5tM(CAU)J1 73 nt1.1□□□□□ -2.23
YHR020WP38708 EMT3tM(CAU)J2 73 nt1.1□□□□□ -2.23
YHR020WP38708 EMT4tM(CAU)M 73 nt1.1□□□□□ -2.23
YHR020WP38708 EMT2tM(CAU)O2 73 nt1.1□□□□□ -2.23
YHR020WP38708 YBR072C-AYBR072C-A 162 nt1.1□□□□□ -2.23
YHR020WP38708 LTE1YAL024C 4308 nt1.1□□□□□ -2.23
YHR020WP38708 GLG1YKR058W 1851 nt1.09□□□□□ -2.23
YHR020WP38708 YCR095W-AYCR095W-A 159 nt1.08□□□□□ -2.24
YHR020WP38708 PAU12YGR294W 363 nt1.08□□□□□ -2.24
YHR020WP38708 PAU24YBR301W 363 nt1.08□□□□□ -2.24
YHR020WP38708 ULP2YIL031W 3105 nt1.07□□□□□ -2.24
YHR020WP38708 YDR210WYDR210W 228 nt1.07□□□□□ -2.24
YHR020WP38708 YJL127W-AYJL127W-A 117 nt1.07□□□□□ -2.24
YHR020WP38708 YCL001W-BYCL001W-B 255 nt1.06□□□□□ -2.24
YHR020WP38708 DOP1YDR141C 5097 nt1.05□□□□□ -2.24
YHR020WP38708 SOM1YEL059C-A 225 nt1.04□□□□□ -2.24
YHR020WP38708 YLL006W-AYLL006W-A 177 nt1.04□□□□□ -2.24
YHR020WP38708 YGR146C-AYGR146C-A 162 nt1.03□□□□□ -2.24
YHR020WP38708 NNF2YGR089W 2811 nt1.03□□□□□ -2.24
YHR020WP38708 RKR1YMR247C 4689 nt1.02□□□□□ -2.25
YHR020WP38708 BEM2YER155C 6504 nt1.02□□□□□ -2.25
YHR020WP38708 SEC1YDR164C 2175 nt1.01□□□□□ -2.25
YHR020WP38708 CSE1YGL238W 2883 nt0.98□□□□□ -2.25
YHR020WP38708 PET111YMR257C 2403 nt0.96□□□□□ -2.26
YHR020WP38708 YBR099CYBR099C 384 nt0.95□□□□□ -2.26
YHR020WP38708 YNL205CYNL205C 423 nt0.94□□□□□ -2.26
YHR020WP38708 tF(GAA)BtF(GAA)B 73 nt0.93□□□□□ -2.26
YHR020WP38708 tF(GAA)FtF(GAA)F 73 nt0.93□□□□□ -2.26
YHR020WP38708 tF(GAA)GtF(GAA)G 73 nt0.93□□□□□ -2.26
YHR020WP38708 tF(GAA)H1tF(GAA)H1 73 nt0.93□□□□□ -2.26
YHR020WP38708 tF(GAA)H2tF(GAA)H2 73 nt0.93□□□□□ -2.26
YHR020WP38708 tF(GAA)MtF(GAA)M 73 nt0.93□□□□□ -2.26
YHR020WP38708 tF(GAA)P1tF(GAA)P1 73 nt0.93□□□□□ -2.26
YHR020WP38708 tF(GAA)P2tF(GAA)P2 73 nt0.93□□□□□ -2.26
YHR020WP38708 MLP1YKR095W 5628 nt0.91□□□□□ -2.26
YHR020WP38708 NIP1YMR309C 2439 nt0.87□□□□□ -2.27
YHR020WP38708 UTP20YBL004W 7482 nt0.86□□□□□ -2.27
YHR020WP38708 YOR192C-BYOR192C-B 5313 nt0.86□□□□□ -2.27
YHR020WP38708 YPR159C-AYPR159C-A 102 nt0.85□□□□□ -2.27
YHR020WP38708 YIL071W-AYIL071W-A 477 nt0.84□□□□□ -2.27
YHR020WP38708 BIR1YJR089W 2865 nt0.84□□□□□ -2.28
YHR020WP38708 RPS26AYGL189C 360 nt0.82□□□□□ -2.28
YHR020WP38708 YDR371C-AYDR371C-A 105 nt0.81□□□□□ -2.28
YHR020WP38708 YIL142C-AYIL142C-A 333 nt0.81□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 63.3 ms