Protein–RNA interactions for Protein: P38349

UBX7, UBX domain-containing protein 7, yeastyeast

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBX7P38349 YBR200W-AYBR200W-A 165 nt1.98□□□□□ -2.09
UBX7P38349 COG6YNL041C 2520 nt1.98□□□□□ -2.09
UBX7P38349 IRC20YLR247C 4671 nt1.98□□□□□ -2.09
UBX7P38349 NEO1YIL048W 3456 nt1.97□□□□□ -2.09
UBX7P38349 YLR419WYLR419W 4308 nt1.97□□□□□ -2.09
UBX7P38349 BST1YFL025C 3090 nt1.96□□□□□ -2.1
UBX7P38349 KAP120YPL125W 3099 nt1.96□□□□□ -2.1
UBX7P38349 YGR146C-AYGR146C-A 162 nt1.95□□□□□ -2.1
UBX7P38349 SEC8YPR055W 3198 nt1.94□□□□□ -2.1
UBX7P38349 FKS1YLR342W 5631 nt1.93□□□□□ -2.1
UBX7P38349 YDR210WYDR210W 228 nt1.93□□□□□ -2.1
UBX7P38349 YJL127W-AYJL127W-A 117 nt1.93□□□□□ -2.1
UBX7P38349 RCO1YMR075W 2055 nt1.92□□□□□ -2.1
UBX7P38349 TRM732YMR259C 4263 nt1.91□□□□□ -2.1
UBX7P38349 BIR1YJR089W 2865 nt1.9□□□□□ -2.1
UBX7P38349 YHR214C-BYHR214C-B 5382 nt1.9□□□□□ -2.1
UBX7P38349 NUP157YER105C 4176 nt1.9□□□□□ -2.11
UBX7P38349 PRP16YKR086W 3216 nt1.89□□□□□ -2.11
UBX7P38349 MON2YNL297C 4911 nt1.88□□□□□ -2.11
UBX7P38349 YDL073WYDL073W 2955 nt1.88□□□□□ -2.11
UBX7P38349 SEC1YDR164C 2175 nt1.88□□□□□ -2.11
UBX7P38349 MSN5YDR335W 3675 nt1.87□□□□□ -2.11
UBX7P38349 EST2YLR318W 2655 nt1.87□□□□□ -2.11
UBX7P38349 AZF1YOR113W 2745 nt1.87□□□□□ -2.11
UBX7P38349 YLR399W-AYLR399W-A 105 nt1.87□□□□□ -2.11
UBX7P38349 CFT1YDR301W 4074 nt1.84□□□□□ -2.11
UBX7P38349 NUP192YJL039C 5052 nt1.83□□□□□ -2.12
UBX7P38349 YNL266WYNL266W 420 nt1.83□□□□□ -2.12
UBX7P38349 GEA2YEL022W 4380 nt1.82□□□□□ -2.12
UBX7P38349 tS(GCU)Q1tS(GCU)Q1 86 nt1.82□□□□□ -2.12
UBX7P38349 YMR045CYMR045C 5268 nt1.82□□□□□ -2.12
UBX7P38349 NUP188YML103C 4968 nt1.81□□□□□ -2.12
UBX7P38349 BRR2YER172C 6492 nt1.81□□□□□ -2.12
UBX7P38349 YSP1YHR155W 3687 nt1.8□□□□□ -2.12
UBX7P38349 YAL037C-AYAL037C-A 93 nt1.8□□□□□ -2.12
UBX7P38349 YBR072C-AYBR072C-A 162 nt1.8□□□□□ -2.12
UBX7P38349 YPR160W-AYPR160W-A 81 nt1.8□□□□□ -2.12
UBX7P38349 snR81snR81 201 nt1.78□□□□□ -2.12
UBX7P38349 YIL142C-AYIL142C-A 333 nt1.78□□□□□ -2.12
UBX7P38349 BEM3YPL115C 3387 nt1.78□□□□□ -2.13
UBX7P38349 YOR093CYOR093C 4947 nt1.77□□□□□ -2.13
UBX7P38349 tT(UGU)HtT(UGU)H 72 nt1.75□□□□□ -2.13
UBX7P38349 CDC39YCR093W 6327 nt1.74□□□□□ -2.13
UBX7P38349 ULP2YIL031W 3105 nt1.74□□□□□ -2.13
UBX7P38349 YMR247W-AYMR247W-A 144 nt1.74□□□□□ -2.13
UBX7P38349 PMD1YER132C 5262 nt1.73□□□□□ -2.13
UBX7P38349 DNF3YMR162C 4971 nt1.72□□□□□ -2.13
UBX7P38349 tN(GUU)QtN(GUU)Q 71 nt1.71□□□□□ -2.14
UBX7P38349 CAT8YMR280C 4302 nt1.71□□□□□ -2.14
UBX7P38349 SXM1YDR395W 2835 nt1.71□□□□□ -2.14
UBX7P38349 FIG2YCR089W 4830 nt1.7□□□□□ -2.14
UBX7P38349 GLG1YKR058W 1851 nt1.7□□□□□ -2.14
UBX7P38349 VPS15YBR097W 4365 nt1.7□□□□□ -2.14
UBX7P38349 BPH1YCR032W 6504 nt1.68□□□□□ -2.14
UBX7P38349 YLL066W-BYLL066W-B 171 nt1.66□□□□□ -2.14
UBX7P38349 UBP3YER151C 2739 nt1.65□□□□□ -2.15
UBX7P38349 MSH3YCR092C 3057 nt1.64□□□□□ -2.15
UBX7P38349 NNF2YGR089W 2811 nt1.63□□□□□ -2.15
UBX7P38349 YBR196C-AYBR196C-A 150 nt1.63□□□□□ -2.15
UBX7P38349 snR62snR62 100 nt1.62□□□□□ -2.15
UBX7P38349 MEC1YBR136W 7107 nt1.61□□□□□ -2.15
UBX7P38349 YPL060C-AYPL060C-A 3315 nt1.61□□□□□ -2.15
UBX7P38349 SEC10YLR166C 2616 nt1.6□□□□□ -2.15
UBX7P38349 snR45snR45 172 nt1.6□□□□□ -2.15
UBX7P38349 YOL083C-AYOL083C-A 141 nt1.56□□□□□ -2.16
UBX7P38349 SPC110YDR356W 2835 nt1.55□□□□□ -2.16
UBX7P38349 HUG1YML058W-A 207 nt1.55□□□□□ -2.16
UBX7P38349 YBL071C-BYBL071C-B 99 nt1.54□□□□□ -2.16
UBX7P38349 YGR130CYGR130C 2451 nt1.53□□□□□ -2.16
UBX7P38349 IRA1YBR140C 9279 nt1.53□□□□□ -2.16
UBX7P38349 CCH1YGR217W 6120 nt1.52□□□□□ -2.17
UBX7P38349 RPS26AYGL189C 360 nt1.51□□□□□ -2.17
UBX7P38349 LAA1YJL207C 6045 nt1.5□□□□□ -2.17
UBX7P38349 YBL100W-CYBL100W-C 120 nt1.49□□□□□ -2.17
UBX7P38349 NST1YNL091W 3723 nt1.48□□□□□ -2.17
UBX7P38349 PIK1YNL267W 3201 nt1.47□□□□□ -2.17
UBX7P38349 SSK2YNR031C 4740 nt1.45□□□□□ -2.18
UBX7P38349 tD(GUC)QtD(GUC)Q 75 nt1.44□□□□□ -2.18
UBX7P38349 YLL006W-AYLL006W-A 177 nt1.44□□□□□ -2.18
UBX7P38349 YLR286W-AYLR286W-A 135 nt1.44□□□□□ -2.18
UBX7P38349 LTE1YAL024C 4308 nt1.43□□□□□ -2.18
UBX7P38349 PET127YOR017W 2403 nt1.43□□□□□ -2.18
UBX7P38349 YOL164W-AYOL164W-A 183 nt1.43□□□□□ -2.18
UBX7P38349 IML1YJR138W 4755 nt1.42□□□□□ -2.18
UBX7P38349 tH(GUG)E1tH(GUG)E1 72 nt1.42□□□□□ -2.18
UBX7P38349 tH(GUG)E2tH(GUG)E2 72 nt1.42□□□□□ -2.18
UBX7P38349 tH(GUG)G1tH(GUG)G1 72 nt1.42□□□□□ -2.18
UBX7P38349 tH(GUG)G2tH(GUG)G2 72 nt1.42□□□□□ -2.18
UBX7P38349 tH(GUG)HtH(GUG)H 72 nt1.42□□□□□ -2.18
UBX7P38349 tH(GUG)KtH(GUG)K 72 nt1.42□□□□□ -2.18
UBX7P38349 tH(GUG)MtH(GUG)M 72 nt1.42□□□□□ -2.18
UBX7P38349 SPT7YBR081C 3999 nt1.41□□□□□ -2.18
UBX7P38349 FYV8YGR196C 2454 nt1.41□□□□□ -2.18
UBX7P38349 HKR1YDR420W 5409 nt1.41□□□□□ -2.18
UBX7P38349 CSE1YGL238W 2883 nt1.4□□□□□ -2.19
UBX7P38349 snR69snR69 101 nt1.39□□□□□ -2.19
UBX7P38349 EST1YLR233C 2100 nt1.39□□□□□ -2.19
UBX7P38349 YGR240C-AYGR240C-A 201 nt1.38□□□□□ -2.19
UBX7P38349 YJL077W-AYJL077W-A 87 nt1.37□□□□□ -2.19
UBX7P38349 SCC2YDR180W 4482 nt1.37□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms