Protein–RNA interactions for Protein: P38235

YBR053C, Uncharacterized protein YBR053C, yeastyeast

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YBR053CP38235 STF2YGR008C 255 nt1.52□□□□□ -2.17
YBR053CP38235 APL3YBL037W 3078 nt1.52□□□□□ -2.17
YBR053CP38235 PMD1YER132C 5262 nt1.5□□□□□ -2.17
YBR053CP38235 YLR232WYLR232W 348 nt1.5□□□□□ -2.17
YBR053CP38235 snR190snR190 190 nt1.5□□□□□ -2.17
YBR053CP38235 KCS1YDR017C 3153 nt1.49□□□□□ -2.17
YBR053CP38235 YLR422WYLR422W 5799 nt1.49□□□□□ -2.17
YBR053CP38235 PKH3YDR466W 2697 nt1.49□□□□□ -2.17
YBR053CP38235 RPL26BYGR034W 384 nt1.49□□□□□ -2.17
YBR053CP38235 SBH1YER087C-B 249 nt1.48□□□□□ -2.17
YBR053CP38235 YGL041C-BYGL041C-B 183 nt1.48□□□□□ -2.17
YBR053CP38235 MSH3YCR092C 3057 nt1.48□□□□□ -2.17
YBR053CP38235 YLR041WYLR041W 321 nt1.47□□□□□ -2.17
YBR053CP38235 YBR200W-AYBR200W-A 165 nt1.46□□□□□ -2.18
YBR053CP38235 SWI4YER111C 3282 nt1.44□□□□□ -2.18
YBR053CP38235 BST1YFL025C 3090 nt1.44□□□□□ -2.18
YBR053CP38235 YJL127W-AYJL127W-A 117 nt1.43□□□□□ -2.18
YBR053CP38235 AZF1YOR113W 2745 nt1.41□□□□□ -2.18
YBR053CP38235 YCS4YLR272C 3531 nt1.41□□□□□ -2.18
YBR053CP38235 YDR210WYDR210W 228 nt1.41□□□□□ -2.18
YBR053CP38235 NUP145YGL092W 3954 nt1.4□□□□□ -2.18
YBR053CP38235 NUP188YML103C 4968 nt1.4□□□□□ -2.18
YBR053CP38235 RAD9YDR217C 3930 nt1.4□□□□□ -2.19
YBR053CP38235 IRA1YBR140C 9279 nt1.4□□□□□ -2.19
YBR053CP38235 CCH1YGR217W 6120 nt1.39□□□□□ -2.19
YBR053CP38235 PRP16YKR086W 3216 nt1.39□□□□□ -2.19
YBR053CP38235 PIK1YNL267W 3201 nt1.38□□□□□ -2.19
YBR053CP38235 tQ(UUG)E2tQ(UUG)E2 72 nt1.38□□□□□ -2.19
YBR053CP38235 PET127YOR017W 2403 nt1.38□□□□□ -2.19
YBR053CP38235 ASE1YOR058C 2658 nt1.38□□□□□ -2.19
YBR053CP38235 KAP120YPL125W 3099 nt1.38□□□□□ -2.19
YBR053CP38235 LAA1YJL207C 6045 nt1.37□□□□□ -2.19
YBR053CP38235 BEM3YPL115C 3387 nt1.37□□□□□ -2.19
YBR053CP38235 RCO1YMR075W 2055 nt1.37□□□□□ -2.19
YBR053CP38235 SSK2YNR031C 4740 nt1.36□□□□□ -2.19
YBR053CP38235 CDC25YLR310C 4770 nt1.36□□□□□ -2.19
YBR053CP38235 SXM1YDR395W 2835 nt1.35□□□□□ -2.19
YBR053CP38235 COG6YNL041C 2520 nt1.35□□□□□ -2.19
YBR053CP38235 tH(GUG)E1tH(GUG)E1 72 nt1.35□□□□□ -2.19
YBR053CP38235 tH(GUG)E2tH(GUG)E2 72 nt1.35□□□□□ -2.19
YBR053CP38235 tH(GUG)G1tH(GUG)G1 72 nt1.35□□□□□ -2.19
YBR053CP38235 tH(GUG)G2tH(GUG)G2 72 nt1.35□□□□□ -2.19
YBR053CP38235 tH(GUG)HtH(GUG)H 72 nt1.35□□□□□ -2.19
YBR053CP38235 tH(GUG)KtH(GUG)K 72 nt1.35□□□□□ -2.19
YBR053CP38235 tH(GUG)MtH(GUG)M 72 nt1.35□□□□□ -2.19
YBR053CP38235 YGR146C-AYGR146C-A 162 nt1.35□□□□□ -2.19
YBR053CP38235 FYV8YGR196C 2454 nt1.35□□□□□ -2.19
YBR053CP38235 SEC8YPR055W 3198 nt1.35□□□□□ -2.19
YBR053CP38235 TRM732YMR259C 4263 nt1.35□□□□□ -2.19
YBR053CP38235 YGR130CYGR130C 2451 nt1.34□□□□□ -2.19
YBR053CP38235 EST2YLR318W 2655 nt1.34□□□□□ -2.19
YBR053CP38235 BIR1YJR089W 2865 nt1.33□□□□□ -2.2
YBR053CP38235 SEC3YER008C 4011 nt1.33□□□□□ -2.2
YBR053CP38235 YDL073WYDL073W 2955 nt1.32□□□□□ -2.2
YBR053CP38235 YNL266WYNL266W 420 nt1.32□□□□□ -2.2
YBR053CP38235 SEC1YDR164C 2175 nt1.3□□□□□ -2.2
YBR053CP38235 ROM2YLR371W 4071 nt1.3□□□□□ -2.2
YBR053CP38235 YNL284C-BYNL284C-B 5268 nt1.29□□□□□ -2.2
YBR053CP38235 YLR399W-AYLR399W-A 105 nt1.29□□□□□ -2.2
YBR053CP38235 SPC110YDR356W 2835 nt1.28□□□□□ -2.2
YBR053CP38235 tN(GUU)QtN(GUU)Q 71 nt1.28□□□□□ -2.2
YBR053CP38235 YBR072C-AYBR072C-A 162 nt1.28□□□□□ -2.2
YBR053CP38235 IML1YJR138W 4755 nt1.28□□□□□ -2.21
YBR053CP38235 HKR1YDR420W 5409 nt1.27□□□□□ -2.21
YBR053CP38235 CDC39YCR093W 6327 nt1.26□□□□□ -2.21
YBR053CP38235 snR81snR81 201 nt1.26□□□□□ -2.21
YBR053CP38235 YIL142C-AYIL142C-A 333 nt1.26□□□□□ -2.21
YBR053CP38235 YPR160W-AYPR160W-A 81 nt1.26□□□□□ -2.21
YBR053CP38235 UBP3YER151C 2739 nt1.25□□□□□ -2.21
YBR053CP38235 tS(GCU)Q1tS(GCU)Q1 86 nt1.25□□□□□ -2.21
YBR053CP38235 YAL037C-AYAL037C-A 93 nt1.23□□□□□ -2.21
YBR053CP38235 YSP1YHR155W 3687 nt1.22□□□□□ -2.21
YBR053CP38235 MSN5YDR335W 3675 nt1.21□□□□□ -2.22
YBR053CP38235 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
YBR053CP38235 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
YBR053CP38235 SIP4YJL089W 2490 nt1.21□□□□□ -2.22
YBR053CP38235 YLL066W-BYLL066W-B 171 nt1.19□□□□□ -2.22
YBR053CP38235 YOL083C-AYOL083C-A 141 nt1.18□□□□□ -2.22
YBR053CP38235 YBR196C-AYBR196C-A 150 nt1.18□□□□□ -2.22
YBR053CP38235 GLG1YKR058W 1851 nt1.18□□□□□ -2.22
YBR053CP38235 RPM2YML091C 3609 nt1.17□□□□□ -2.22
YBR053CP38235 SPT7YBR081C 3999 nt1.16□□□□□ -2.22
YBR053CP38235 CLU1YMR012W 3834 nt1.15□□□□□ -2.22
YBR053CP38235 snR45snR45 172 nt1.15□□□□□ -2.23
YBR053CP38235 SEC10YLR166C 2616 nt1.14□□□□□ -2.23
YBR053CP38235 ULP2YIL031W 3105 nt1.14□□□□□ -2.23
YBR053CP38235 NNF2YGR089W 2811 nt1.14□□□□□ -2.23
YBR053CP38235 BUD3YCL014W 4911 nt1.13□□□□□ -2.23
YBR053CP38235 YJR029WYJR029W 5268 nt1.12□□□□□ -2.23
YBR053CP38235 YPR137C-BYPR137C-B 5268 nt1.12□□□□□ -2.23
YBR053CP38235 SCC2YDR180W 4482 nt1.12□□□□□ -2.23
YBR053CP38235 HUG1YML058W-A 207 nt1.11□□□□□ -2.23
YBR053CP38235 YBL071C-BYBL071C-B 99 nt1.1□□□□□ -2.23
YBR053CP38235 DOP1YDR141C 5097 nt1.1□□□□□ -2.23
YBR053CP38235 CSE1YGL238W 2883 nt1.09□□□□□ -2.23
YBR053CP38235 snR62snR62 100 nt1.09□□□□□ -2.23
YBR053CP38235 YLL006W-AYLL006W-A 177 nt1.08□□□□□ -2.24
YBR053CP38235 BEM2YER155C 6504 nt1.06□□□□□ -2.24
YBR053CP38235 YBL100W-CYBL100W-C 120 nt1.05□□□□□ -2.24
YBR053CP38235 tD(GUC)QtD(GUC)Q 75 nt1.04□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms