Protein–RNA interactions for Protein: P38187

UBP13, Ubiquitin carboxyl-terminal hydrolase 13, yeastyeast

Predictions only

Length 747 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP13P38187 YML002WYML002W 2214 nt1.1□□□□□ -2.23
UBP13P38187 PMP1YCR024C-A 123 nt1.1□□□□□ -2.23
UBP13P38187 YFR012W-AYFR012W-A 87 nt1.1□□□□□ -2.23
UBP13P38187 YOR161W-AYOR161W-A 81 nt1.1□□□□□ -2.23
UBP13P38187 snR190snR190 190 nt1.1□□□□□ -2.23
UBP13P38187 ASE1YOR058C 2658 nt1.09□□□□□ -2.23
UBP13P38187 HUG1YML058W-A 207 nt1.09□□□□□ -2.23
UBP13P38187 YER053C-AYER053C-A 114 nt1.08□□□□□ -2.24
UBP13P38187 SEC8YPR055W 3198 nt1.08□□□□□ -2.24
UBP13P38187 UTP8YGR128C 2142 nt1.07□□□□□ -2.24
UBP13P38187 BFR2YDR299W 1605 nt1.07□□□□□ -2.24
UBP13P38187 PRP42YDR235W 1635 nt1.06□□□□□ -2.24
UBP13P38187 TRS65YGR166W 1683 nt1.06□□□□□ -2.24
UBP13P38187 YOR381W-AYOR381W-A 168 nt1.05□□□□□ -2.24
UBP13P38187 PRP5YBR237W 2550 nt1.05□□□□□ -2.24
UBP13P38187 PRP16YKR086W 3216 nt1.04□□□□□ -2.24
UBP13P38187 DOP1YDR141C 5097 nt1.03□□□□□ -2.24
UBP13P38187 YLR399W-AYLR399W-A 105 nt1.03□□□□□ -2.24
UBP13P38187 YLR041WYLR041W 321 nt1.02□□□□□ -2.25
UBP13P38187 FYV10YIL097W 1551 nt1.01□□□□□ -2.25
UBP13P38187 YNL338WYNL338W 159 nt1.01□□□□□ -2.25
UBP13P38187 UBP3YER151C 2739 nt1.01□□□□□ -2.25
UBP13P38187 YLR294CYLR294C 330 nt1□□□□□ -2.25
UBP13P38187 YPR160W-AYPR160W-A 81 nt1□□□□□ -2.25
UBP13P38187 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
UBP13P38187 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
UBP13P38187 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
UBP13P38187 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
UBP13P38187 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
UBP13P38187 PAU24YBR301W 363 nt0.98□□□□□ -2.25
UBP13P38187 YPR117WYPR117W 7470 nt0.95□□□□□ -2.26
UBP13P38187 YGL182CYGL182C 324 nt0.95□□□□□ -2.26
UBP13P38187 RKR1YMR247C 4689 nt0.94□□□□□ -2.26
UBP13P38187 TAH1YCR060W 336 nt0.93□□□□□ -2.26
UBP13P38187 YHR131W-AYHR131W-A 246 nt0.93□□□□□ -2.26
UBP13P38187 YLR232WYLR232W 348 nt0.93□□□□□ -2.26
UBP13P38187 YHL015W-AYHL015W-A 84 nt0.92□□□□□ -2.26
UBP13P38187 YBL039C-AYBL039C-A 84 nt0.92□□□□□ -2.26
UBP13P38187 YDL073WYDL073W 2955 nt0.92□□□□□ -2.26
UBP13P38187 YOR170WYOR170W 306 nt0.91□□□□□ -2.26
UBP13P38187 YSP1YHR155W 3687 nt0.9□□□□□ -2.27
UBP13P38187 tN(GUU)QtN(GUU)Q 71 nt0.9□□□□□ -2.27
UBP13P38187 BEM3YPL115C 3387 nt0.9□□□□□ -2.27
UBP13P38187 SNU13YEL026W 381 nt0.89□□□□□ -2.27
UBP13P38187 YIL142C-AYIL142C-A 333 nt0.89□□□□□ -2.27
UBP13P38187 YOR102WYOR102W 351 nt0.88□□□□□ -2.27
UBP13P38187 snR48snR48 113 nt0.88□□□□□ -2.27
UBP13P38187 CHS6YJL099W 2241 nt0.87□□□□□ -2.27
UBP13P38187 OST4YDL232W 111 nt0.86□□□□□ -2.27
UBP13P38187 RPM2YML091C 3609 nt0.86□□□□□ -2.27
UBP13P38187 LTE1YAL024C 4308 nt0.83□□□□□ -2.28
UBP13P38187 YDR544CYDR544C 429 nt0.81□□□□□ -2.28
UBP13P38187 SEC1YDR164C 2175 nt0.81□□□□□ -2.28
UBP13P38187 YOR314W-AYOR314W-A 111 nt0.8□□□□□ -2.28
UBP13P38187 PAU12YGR294W 363 nt0.79□□□□□ -2.28
UBP13P38187 YJL127W-AYJL127W-A 117 nt0.79□□□□□ -2.28
UBP13P38187 YBL053WYBL053W 375 nt0.79□□□□□ -2.28
UBP13P38187 YDL007C-AYDL007C-A 258 nt0.78□□□□□ -2.28
UBP13P38187 tL(UAA)QtL(UAA)Q 85 nt0.78□□□□□ -2.28
UBP13P38187 YOR329W-AYOR329W-A 210 nt0.78□□□□□ -2.28
UBP13P38187 COG6YNL041C 2520 nt0.78□□□□□ -2.28
UBP13P38187 tM(CAU)Q2tM(CAU)Q2 78 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)BtT(AGU)B 73 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)CtT(AGU)C 73 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)DtT(AGU)D 73 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)HtT(AGU)H 73 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)I1tT(AGU)I1 73 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)I2tT(AGU)I2 73 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)JtT(AGU)J 73 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)N1tT(AGU)N1 73 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)N2tT(AGU)N2 73 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)O1tT(AGU)O1 73 nt0.77□□□□□ -2.29
UBP13P38187 tT(AGU)O2tT(AGU)O2 73 nt0.77□□□□□ -2.29
UBP13P38187 YBR072C-AYBR072C-A 162 nt0.77□□□□□ -2.29
UBP13P38187 ULP2YIL031W 3105 nt0.76□□□□□ -2.29
UBP13P38187 YMR160WYMR160W 2451 nt0.75□□□□□ -2.29
UBP13P38187 GLG1YKR058W 1851 nt0.75□□□□□ -2.29
UBP13P38187 NNF2YGR089W 2811 nt0.74□□□□□ -2.29
UBP13P38187 YPR159C-AYPR159C-A 102 nt0.74□□□□□ -2.29
UBP13P38187 tF(GAA)BtF(GAA)B 73 nt0.73□□□□□ -2.29
UBP13P38187 tF(GAA)FtF(GAA)F 73 nt0.73□□□□□ -2.29
UBP13P38187 tF(GAA)GtF(GAA)G 73 nt0.73□□□□□ -2.29
UBP13P38187 tF(GAA)H1tF(GAA)H1 73 nt0.73□□□□□ -2.29
UBP13P38187 tF(GAA)H2tF(GAA)H2 73 nt0.73□□□□□ -2.29
UBP13P38187 tF(GAA)MtF(GAA)M 73 nt0.73□□□□□ -2.29
UBP13P38187 tF(GAA)P1tF(GAA)P1 73 nt0.73□□□□□ -2.29
UBP13P38187 tF(GAA)P2tF(GAA)P2 73 nt0.73□□□□□ -2.29
UBP13P38187 QCR9YGR183C 201 nt0.73□□□□□ -2.29
UBP13P38187 UTP20YBL004W 7482 nt0.72□□□□□ -2.29
UBP13P38187 SDH6YDR379C-A 240 nt0.72□□□□□ -2.29
UBP13P38187 YGR164WYGR164W 336 nt0.72□□□□□ -2.29
UBP13P38187 YLL006W-AYLL006W-A 177 nt0.72□□□□□ -2.29
UBP13P38187 snR39BsnR39B 96 nt0.7□□□□□ -2.3
UBP13P38187 PET111YMR257C 2403 nt0.7□□□□□ -2.3
UBP13P38187 YOR192C-BYOR192C-B 5313 nt0.7□□□□□ -2.3
UBP13P38187 YDR210WYDR210W 228 nt0.69□□□□□ -2.3
UBP13P38187 YNL067W-BYNL067W-B 141 nt0.69□□□□□ -2.3
UBP13P38187 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
UBP13P38187 MLP1YKR095W 5628 nt0.65□□□□□ -2.3
UBP13P38187 NIP1YMR309C 2439 nt0.65□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 42.3 ms