Protein–RNA interactions for Protein: P35203

CTF13, Centromere DNA-binding protein complex CBF3 subunit C, yeastyeast

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTF13P35203 IRA1YBR140C 9279 nt1.56□□□□□ -2.16
CTF13P35203 tM(CAU)Q2tM(CAU)Q2 78 nt1.55□□□□□ -2.16
CTF13P35203 FIG2YCR089W 4830 nt1.54□□□□□ -2.16
CTF13P35203 YGL041C-BYGL041C-B 183 nt1.54□□□□□ -2.16
CTF13P35203 STF2YGR008C 255 nt1.54□□□□□ -2.16
CTF13P35203 YLR041WYLR041W 321 nt1.54□□□□□ -2.16
CTF13P35203 SPC110YDR356W 2835 nt1.53□□□□□ -2.16
CTF13P35203 SBH1YER087C-B 249 nt1.53□□□□□ -2.16
CTF13P35203 BRR2YER172C 6492 nt1.53□□□□□ -2.16
CTF13P35203 YLR232WYLR232W 348 nt1.53□□□□□ -2.16
CTF13P35203 CHS1YNL192W 3396 nt1.53□□□□□ -2.16
CTF13P35203 snR190snR190 190 nt1.53□□□□□ -2.16
CTF13P35203 RPL26BYGR034W 384 nt1.52□□□□□ -2.17
CTF13P35203 ANS1YHR126C 480 nt1.52□□□□□ -2.17
CTF13P35203 SAC3YDR159W 3906 nt1.51□□□□□ -2.17
CTF13P35203 APL3YBL037W 3078 nt1.51□□□□□ -2.17
CTF13P35203 AZF1YOR113W 2745 nt1.49□□□□□ -2.17
CTF13P35203 SWI4YER111C 3282 nt1.48□□□□□ -2.17
CTF13P35203 EST2YLR318W 2655 nt1.47□□□□□ -2.17
CTF13P35203 MSH3YCR092C 3057 nt1.47□□□□□ -2.17
CTF13P35203 YBR200W-AYBR200W-A 165 nt1.47□□□□□ -2.17
CTF13P35203 NUP188YML103C 4968 nt1.46□□□□□ -2.18
CTF13P35203 YDR210WYDR210W 228 nt1.46□□□□□ -2.18
CTF13P35203 YJL127W-AYJL127W-A 117 nt1.46□□□□□ -2.18
CTF13P35203 ASE1YOR058C 2658 nt1.46□□□□□ -2.18
CTF13P35203 RCO1YMR075W 2055 nt1.46□□□□□ -2.18
CTF13P35203 TRM732YMR259C 4263 nt1.45□□□□□ -2.18
CTF13P35203 CCH1YGR217W 6120 nt1.45□□□□□ -2.18
CTF13P35203 SSK2YNR031C 4740 nt1.44□□□□□ -2.18
CTF13P35203 HKR1YDR420W 5409 nt1.44□□□□□ -2.18
CTF13P35203 RAD9YDR217C 3930 nt1.44□□□□□ -2.18
CTF13P35203 YCS4YLR272C 3531 nt1.43□□□□□ -2.18
CTF13P35203 KAP120YPL125W 3099 nt1.42□□□□□ -2.18
CTF13P35203 NUP145YGL092W 3954 nt1.42□□□□□ -2.18
CTF13P35203 COG6YNL041C 2520 nt1.41□□□□□ -2.18
CTF13P35203 CDC39YCR093W 6327 nt1.39□□□□□ -2.19
CTF13P35203 PRP16YKR086W 3216 nt1.39□□□□□ -2.19
CTF13P35203 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
CTF13P35203 YGR146C-AYGR146C-A 162 nt1.38□□□□□ -2.19
CTF13P35203 LAA1YJL207C 6045 nt1.38□□□□□ -2.19
CTF13P35203 SEC3YER008C 4011 nt1.37□□□□□ -2.19
CTF13P35203 BIR1YJR089W 2865 nt1.37□□□□□ -2.19
CTF13P35203 BEM3YPL115C 3387 nt1.37□□□□□ -2.19
CTF13P35203 PET127YOR017W 2403 nt1.37□□□□□ -2.19
CTF13P35203 SEC8YPR055W 3198 nt1.37□□□□□ -2.19
CTF13P35203 YNL266WYNL266W 420 nt1.36□□□□□ -2.19
CTF13P35203 MSN5YDR335W 3675 nt1.36□□□□□ -2.19
CTF13P35203 SEC1YDR164C 2175 nt1.35□□□□□ -2.19
CTF13P35203 tN(GUU)QtN(GUU)Q 71 nt1.34□□□□□ -2.19
CTF13P35203 YDL073WYDL073W 2955 nt1.34□□□□□ -2.2
CTF13P35203 snR81snR81 201 nt1.33□□□□□ -2.2
CTF13P35203 tH(GUG)E1tH(GUG)E1 72 nt1.33□□□□□ -2.2
CTF13P35203 tH(GUG)E2tH(GUG)E2 72 nt1.33□□□□□ -2.2
CTF13P35203 tH(GUG)G1tH(GUG)G1 72 nt1.33□□□□□ -2.2
CTF13P35203 tH(GUG)G2tH(GUG)G2 72 nt1.33□□□□□ -2.2
CTF13P35203 tH(GUG)HtH(GUG)H 72 nt1.33□□□□□ -2.2
CTF13P35203 tH(GUG)KtH(GUG)K 72 nt1.33□□□□□ -2.2
CTF13P35203 tH(GUG)MtH(GUG)M 72 nt1.33□□□□□ -2.2
CTF13P35203 tS(GCU)Q1tS(GCU)Q1 86 nt1.33□□□□□ -2.2
CTF13P35203 CDC25YLR310C 4770 nt1.32□□□□□ -2.2
CTF13P35203 tQ(UUG)E2tQ(UUG)E2 72 nt1.32□□□□□ -2.2
CTF13P35203 YBR072C-AYBR072C-A 162 nt1.32□□□□□ -2.2
CTF13P35203 YIL142C-AYIL142C-A 333 nt1.31□□□□□ -2.2
CTF13P35203 YLR399W-AYLR399W-A 105 nt1.31□□□□□ -2.2
CTF13P35203 YPR160W-AYPR160W-A 81 nt1.31□□□□□ -2.2
CTF13P35203 PIK1YNL267W 3201 nt1.3□□□□□ -2.2
CTF13P35203 UBP3YER151C 2739 nt1.28□□□□□ -2.2
CTF13P35203 YGR130CYGR130C 2451 nt1.28□□□□□ -2.2
CTF13P35203 ROM2YLR371W 4071 nt1.27□□□□□ -2.21
CTF13P35203 YAL037C-AYAL037C-A 93 nt1.27□□□□□ -2.21
CTF13P35203 IML1YJR138W 4755 nt1.25□□□□□ -2.21
CTF13P35203 YSP1YHR155W 3687 nt1.24□□□□□ -2.21
CTF13P35203 YLL066W-BYLL066W-B 171 nt1.23□□□□□ -2.21
CTF13P35203 CLU1YMR012W 3834 nt1.23□□□□□ -2.21
CTF13P35203 YOL083C-AYOL083C-A 141 nt1.22□□□□□ -2.21
CTF13P35203 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
CTF13P35203 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
CTF13P35203 YBR196C-AYBR196C-A 150 nt1.21□□□□□ -2.22
CTF13P35203 NNF2YGR089W 2811 nt1.21□□□□□ -2.22
CTF13P35203 YNL284C-BYNL284C-B 5268 nt1.2□□□□□ -2.22
CTF13P35203 GLG1YKR058W 1851 nt1.2□□□□□ -2.22
CTF13P35203 snR45snR45 172 nt1.2□□□□□ -2.22
CTF13P35203 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
CTF13P35203 SEC10YLR166C 2616 nt1.18□□□□□ -2.22
CTF13P35203 SIP4YJL089W 2490 nt1.17□□□□□ -2.22
CTF13P35203 RPM2YML091C 3609 nt1.16□□□□□ -2.22
CTF13P35203 YBL071C-BYBL071C-B 99 nt1.16□□□□□ -2.22
CTF13P35203 ULP2YIL031W 3105 nt1.14□□□□□ -2.23
CTF13P35203 snR62snR62 100 nt1.13□□□□□ -2.23
CTF13P35203 NST1YNL091W 3723 nt1.13□□□□□ -2.23
CTF13P35203 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
CTF13P35203 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
CTF13P35203 RPS26AYGL189C 360 nt1.1□□□□□ -2.23
CTF13P35203 CSE1YGL238W 2883 nt1.09□□□□□ -2.23
CTF13P35203 YLL006W-AYLL006W-A 177 nt1.09□□□□□ -2.23
CTF13P35203 DOP1YDR141C 5097 nt1.09□□□□□ -2.24
CTF13P35203 YLR286W-AYLR286W-A 135 nt1.08□□□□□ -2.24
CTF13P35203 RKR1YMR247C 4689 nt1.08□□□□□ -2.24
CTF13P35203 HUG1YML058W-A 207 nt1.07□□□□□ -2.24
CTF13P35203 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms