Protein–RNA interactions for Protein: P32500

NDC1, Nucleoporin NDC1, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDC1P32500 YML002WYML002W 2214 nt0.99□□□□□ -2.25
NDC1P32500 PRP5YBR237W 2550 nt0.99□□□□□ -2.25
NDC1P32500 SCC2YDR180W 4482 nt0.98□□□□□ -2.25
NDC1P32500 YLR041WYLR041W 321 nt0.96□□□□□ -2.26
NDC1P32500 DOP1YDR141C 5097 nt0.96□□□□□ -2.26
NDC1P32500 FYV10YIL097W 1551 nt0.96□□□□□ -2.26
NDC1P32500 UTP8YGR128C 2142 nt0.95□□□□□ -2.26
NDC1P32500 YJR029WYJR029W 5268 nt0.95□□□□□ -2.26
NDC1P32500 YPR137C-BYPR137C-B 5268 nt0.95□□□□□ -2.26
NDC1P32500 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
NDC1P32500 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
NDC1P32500 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
NDC1P32500 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
NDC1P32500 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
NDC1P32500 YBL053WYBL053W 375 nt0.95□□□□□ -2.26
NDC1P32500 YGR130CYGR130C 2451 nt0.95□□□□□ -2.26
NDC1P32500 SIP4YJL089W 2490 nt0.95□□□□□ -2.26
NDC1P32500 YDL007C-AYDL007C-A 258 nt0.94□□□□□ -2.26
NDC1P32500 tV(UAC)BtV(UAC)B 74 nt0.94□□□□□ -2.26
NDC1P32500 tV(UAC)DtV(UAC)D 74 nt0.94□□□□□ -2.26
NDC1P32500 SPT7YBR081C 3999 nt0.94□□□□□ -2.26
NDC1P32500 SEC8YPR055W 3198 nt0.93□□□□□ -2.26
NDC1P32500 YGL182CYGL182C 324 nt0.92□□□□□ -2.26
NDC1P32500 PRP16YKR086W 3216 nt0.91□□□□□ -2.26
NDC1P32500 IML1YJR138W 4755 nt0.91□□□□□ -2.26
NDC1P32500 TAH1YCR060W 336 nt0.91□□□□□ -2.26
NDC1P32500 YBL039C-AYBL039C-A 84 nt0.91□□□□□ -2.26
NDC1P32500 BUD3YCL014W 4911 nt0.9□□□□□ -2.26
NDC1P32500 YPR160W-AYPR160W-A 81 nt0.9□□□□□ -2.27
NDC1P32500 YHL015W-AYHL015W-A 84 nt0.89□□□□□ -2.27
NDC1P32500 YLR399W-AYLR399W-A 105 nt0.89□□□□□ -2.27
NDC1P32500 tN(GUU)QtN(GUU)Q 71 nt0.88□□□□□ -2.27
NDC1P32500 YOR102WYOR102W 351 nt0.88□□□□□ -2.27
NDC1P32500 RKR1YMR247C 4689 nt0.87□□□□□ -2.27
NDC1P32500 YOR170WYOR170W 306 nt0.87□□□□□ -2.27
NDC1P32500 snR48snR48 113 nt0.87□□□□□ -2.27
NDC1P32500 YHR131W-AYHR131W-A 246 nt0.85□□□□□ -2.27
NDC1P32500 YLR232WYLR232W 348 nt0.85□□□□□ -2.27
NDC1P32500 tL(UAA)QtL(UAA)Q 85 nt0.84□□□□□ -2.27
NDC1P32500 YDL073WYDL073W 2955 nt0.84□□□□□ -2.28
NDC1P32500 SNU13YEL026W 381 nt0.83□□□□□ -2.28
NDC1P32500 PAU24YBR301W 363 nt0.83□□□□□ -2.28
NDC1P32500 YPR117WYPR117W 7470 nt0.83□□□□□ -2.28
NDC1P32500 YDR544CYDR544C 429 nt0.82□□□□□ -2.28
NDC1P32500 MYO1YHR023W 5787 nt0.81□□□□□ -2.28
NDC1P32500 CHS6YJL099W 2241 nt0.81□□□□□ -2.28
NDC1P32500 OST4YDL232W 111 nt0.81□□□□□ -2.28
NDC1P32500 ATP8Q0080 147 nt0.81□□□□□ -2.28
NDC1P32500 Q0092Q0092 141 nt0.81□□□□□ -2.28
NDC1P32500 YGR164WYGR164W 336 nt0.81□□□□□ -2.28
NDC1P32500 YOR329W-AYOR329W-A 210 nt0.81□□□□□ -2.28
NDC1P32500 YOR314W-AYOR314W-A 111 nt0.8□□□□□ -2.28
NDC1P32500 UBP3YER151C 2739 nt0.78□□□□□ -2.28
NDC1P32500 YNL170WYNL170W 396 nt0.77□□□□□ -2.29
NDC1P32500 BEM3YPL115C 3387 nt0.77□□□□□ -2.29
NDC1P32500 YSP1YHR155W 3687 nt0.76□□□□□ -2.29
NDC1P32500 SDH6YDR379C-A 240 nt0.76□□□□□ -2.29
NDC1P32500 QCR9YGR183C 201 nt0.75□□□□□ -2.29
NDC1P32500 snR39BsnR39B 96 nt0.75□□□□□ -2.29
NDC1P32500 COG6YNL041C 2520 nt0.74□□□□□ -2.29
NDC1P32500 tM(CAU)Q2tM(CAU)Q2 78 nt0.72□□□□□ -2.29
NDC1P32500 SEC1YDR164C 2175 nt0.72□□□□□ -2.29
NDC1P32500 YNL067W-BYNL067W-B 141 nt0.71□□□□□ -2.3
NDC1P32500 YBR072C-AYBR072C-A 162 nt0.71□□□□□ -2.3
NDC1P32500 YDR210WYDR210W 228 nt0.7□□□□□ -2.3
NDC1P32500 YJL127W-AYJL127W-A 117 nt0.7□□□□□ -2.3
NDC1P32500 YOR192C-BYOR192C-B 5313 nt0.68□□□□□ -2.3
NDC1P32500 NNF2YGR089W 2811 nt0.68□□□□□ -2.3
NDC1P32500 YLL006W-AYLL006W-A 177 nt0.67□□□□□ -2.3
NDC1P32500 GLG1YKR058W 1851 nt0.67□□□□□ -2.3
NDC1P32500 ULP2YIL031W 3105 nt0.66□□□□□ -2.3
NDC1P32500 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
NDC1P32500 YPR159C-AYPR159C-A 102 nt0.65□□□□□ -2.31
NDC1P32500 YCL001W-BYCL001W-B 255 nt0.65□□□□□ -2.31
NDC1P32500 LTE1YAL024C 4308 nt0.63□□□□□ -2.31
NDC1P32500 STF2YGR008C 255 nt0.62□□□□□ -2.31
NDC1P32500 YIL142C-AYIL142C-A 333 nt0.62□□□□□ -2.31
NDC1P32500 RPM2YML091C 3609 nt0.62□□□□□ -2.31
NDC1P32500 BUL2YML111W 2763 nt0.62□□□□□ -2.31
NDC1P32500 YGR146C-AYGR146C-A 162 nt0.61□□□□□ -2.31
NDC1P32500 YIL071W-AYIL071W-A 477 nt0.61□□□□□ -2.31
NDC1P32500 PET111YMR257C 2403 nt0.61□□□□□ -2.31
NDC1P32500 NIP1YMR309C 2439 nt0.61□□□□□ -2.31
NDC1P32500 PAU12YGR294W 363 nt0.6□□□□□ -2.31
NDC1P32500 YCR095W-AYCR095W-A 159 nt0.59□□□□□ -2.31
NDC1P32500 SOM1YEL059C-A 225 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)BtT(AGU)B 73 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)CtT(AGU)C 73 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)DtT(AGU)D 73 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)HtT(AGU)H 73 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)I1tT(AGU)I1 73 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)I2tT(AGU)I2 73 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)JtT(AGU)J 73 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)N1tT(AGU)N1 73 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)N2tT(AGU)N2 73 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)O1tT(AGU)O1 73 nt0.59□□□□□ -2.31
NDC1P32500 tT(AGU)O2tT(AGU)O2 73 nt0.59□□□□□ -2.31
NDC1P32500 YDR371C-AYDR371C-A 105 nt0.58□□□□□ -2.32
NDC1P32500 RPS26AYGL189C 360 nt0.58□□□□□ -2.32
NDC1P32500 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 25.5 ms