Protein–RNA interactions for Protein: P32445

RIM1, Single-stranded DNA-binding protein RIM1, mitochondrial, yeastyeast

Known RBP Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM1P32445 YOR161W-AYOR161W-A 81 nt0.53□□□□□ -2.32
RIM1P32445 YOR345CYOR345C 351 nt0.53□□□□□ -2.32
RIM1P32445 MLP1YKR095W 5628 nt0.52□□□□□ -2.33
RIM1P32445 PET111YMR257C 2403 nt0.52□□□□□ -2.33
RIM1P32445 snR74snR74 88 nt0.51□□□□□ -2.33
RIM1P32445 UTP10YJL109C 5310 nt0.51□□□□□ -2.33
RIM1P32445 ULP2YIL031W 3105 nt0.51□□□□□ -2.33
RIM1P32445 Q0142Q0142 177 nt0.5□□□□□ -2.33
RIM1P32445 tF(GAA)BtF(GAA)B 73 nt0.48□□□□□ -2.33
RIM1P32445 tF(GAA)FtF(GAA)F 73 nt0.48□□□□□ -2.33
RIM1P32445 tF(GAA)GtF(GAA)G 73 nt0.48□□□□□ -2.33
RIM1P32445 tF(GAA)H1tF(GAA)H1 73 nt0.48□□□□□ -2.33
RIM1P32445 tF(GAA)H2tF(GAA)H2 73 nt0.48□□□□□ -2.33
RIM1P32445 tF(GAA)MtF(GAA)M 73 nt0.48□□□□□ -2.33
RIM1P32445 tF(GAA)P1tF(GAA)P1 73 nt0.48□□□□□ -2.33
RIM1P32445 tF(GAA)P2tF(GAA)P2 73 nt0.48□□□□□ -2.33
RIM1P32445 PAU12YGR294W 363 nt0.48□□□□□ -2.33
RIM1P32445 YNL146WYNL146W 303 nt0.48□□□□□ -2.33
RIM1P32445 FMP27YLR454W 7887 nt0.48□□□□□ -2.33
RIM1P32445 YPR010C-AYPR010C-A 219 nt0.47□□□□□ -2.33
RIM1P32445 SBH1YER087C-B 249 nt0.46□□□□□ -2.34
RIM1P32445 COX12YLR038C 252 nt0.46□□□□□ -2.34
RIM1P32445 YHR131W-AYHR131W-A 246 nt0.44□□□□□ -2.34
RIM1P32445 NNF2YGR089W 2811 nt0.44□□□□□ -2.34
RIM1P32445 YIR030W-AYIR030W-A 384 nt0.43□□□□□ -2.34
RIM1P32445 YOR192C-BYOR192C-B 5313 nt0.42□□□□□ -2.34
RIM1P32445 MLP2YIL149C 5040 nt0.42□□□□□ -2.34
RIM1P32445 YIL002W-AYIL002W-A 210 nt0.41□□□□□ -2.34
RIM1P32445 YDR366CYDR366C 399 nt0.4□□□□□ -2.35
RIM1P32445 SNU13YEL026W 381 nt0.4□□□□□ -2.35
RIM1P32445 YER053C-AYER053C-A 114 nt0.4□□□□□ -2.35
RIM1P32445 tF(GAA)QtF(GAA)Q 75 nt0.39□□□□□ -2.35
RIM1P32445 YOR231C-AYOR231C-A 201 nt0.39□□□□□ -2.35
RIM1P32445 YBR182C-AYBR182C-A 195 nt0.39□□□□□ -2.35
RIM1P32445 BIR1YJR089W 2865 nt0.39□□□□□ -2.35
RIM1P32445 RPS26AYGL189C 360 nt0.38□□□□□ -2.35
RIM1P32445 QCR9YGR183C 201 nt0.38□□□□□ -2.35
RIM1P32445 ABF2YMR072W 552 nt0.38□□□□□ -2.35
RIM1P32445 YPL152W-AYPL152W-A 99 nt0.38□□□□□ -2.35
RIM1P32445 snR49snR49 165 nt0.38□□□□□ -2.35
RIM1P32445 YKU70YMR284W 1809 nt0.38□□□□□ -2.35
RIM1P32445 NIP1YMR309C 2439 nt0.37□□□□□ -2.35
RIM1P32445 TRS65YGR166W 1683 nt0.37□□□□□ -2.35
RIM1P32445 YKL145W-AYKL145W-A 93 nt0.37□□□□□ -2.35
RIM1P32445 AI1Q0050 2505 nt0.36□□□□□ -2.35
RIM1P32445 YDR371C-AYDR371C-A 105 nt0.36□□□□□ -2.35
RIM1P32445 BUL2YML111W 2763 nt0.35□□□□□ -2.35
RIM1P32445 YER181CYER181C 324 nt0.35□□□□□ -2.35
RIM1P32445 snR55snR55 98 nt0.33□□□□□ -2.36
RIM1P32445 YCR038W-AYCR038W-A 126 nt0.33□□□□□ -2.36
RIM1P32445 YLL006W-AYLL006W-A 177 nt0.33□□□□□ -2.36
RIM1P32445 ORC3YLL004W 1851 nt0.32□□□□□ -2.36
RIM1P32445 YOL014WYOL014W 375 nt0.31□□□□□ -2.36
RIM1P32445 RPM2YML091C 3609 nt0.3□□□□□ -2.36
RIM1P32445 UTP8YGR128C 2142 nt0.29□□□□□ -2.36
RIM1P32445 RCO1YMR075W 2055 nt0.29□□□□□ -2.36
RIM1P32445 APQ12YIL040W 417 nt0.28□□□□□ -2.36
RIM1P32445 YLR232WYLR232W 348 nt0.28□□□□□ -2.36
RIM1P32445 YML099W-AYML099W-A 330 nt0.28□□□□□ -2.36
RIM1P32445 YOL155W-AYOL155W-A 135 nt0.28□□□□□ -2.36
RIM1P32445 YBR072C-AYBR072C-A 162 nt0.28□□□□□ -2.36
RIM1P32445 ESP1YGR098C 4893 nt0.28□□□□□ -2.36
RIM1P32445 YBL100W-BYBL100W-B 5313 nt0.26□□□□□ -2.37
RIM1P32445 YNL054W-BYNL054W-B 5250 nt0.25□□□□□ -2.37
RIM1P32445 YOL013W-AYOL013W-A 192 nt0.25□□□□□ -2.37
RIM1P32445 YOR186C-AYOR186C-A 210 nt0.24□□□□□ -2.37
RIM1P32445 GLG1YKR058W 1851 nt0.24□□□□□ -2.37
RIM1P32445 THO2YNL139C 4794 nt0.23□□□□□ -2.37
RIM1P32445 PRP39YML046W 1890 nt0.22□□□□□ -2.37
RIM1P32445 YGL041CYGL041C 204 nt0.22□□□□□ -2.37
RIM1P32445 YGL188C-AYGL188C-A 141 nt0.22□□□□□ -2.37
RIM1P32445 TAH1YCR060W 336 nt0.2□□□□□ -2.38
RIM1P32445 YEL073CYEL073C 324 nt0.2□□□□□ -2.38
RIM1P32445 YMR158W-BYMR158W-B 321 nt0.19□□□□□ -2.38
RIM1P32445 YNL097C-BYNL097C-B 123 nt0.19□□□□□ -2.38
RIM1P32445 YBR131C-AYBR131C-A 90 nt0.19□□□□□ -2.38
RIM1P32445 SDH6YDR379C-A 240 nt0.17□□□□□ -2.38
RIM1P32445 YBL039C-AYBL039C-A 84 nt0.17□□□□□ -2.38
RIM1P32445 YOR302WYOR302W 78 nt0.15□□□□□ -2.39
RIM1P32445 COG6YNL041C 2520 nt0.13□□□□□ -2.39
RIM1P32445 YGL182CYGL182C 324 nt0.12□□□□□ -2.39
RIM1P32445 YDR544CYDR544C 429 nt0.11□□□□□ -2.39
RIM1P32445 MYO1YHR023W 5787 nt0.1□□□□□ -2.39
RIM1P32445 YER078W-AYER078W-A 165 nt0.1□□□□□ -2.39
RIM1P32445 YJL182CYJL182C 318 nt0.1□□□□□ -2.39
RIM1P32445 CSE1YGL238W 2883 nt0.09□□□□□ -2.39
RIM1P32445 SOV1YMR066W 2697 nt0.09□□□□□ -2.39
RIM1P32445 YBR099CYBR099C 384 nt0.09□□□□□ -2.4
RIM1P32445 snR80snR80 171 nt0.07□□□□□ -2.4
RIM1P32445 YEL014CYEL014C 306 nt0.07□□□□□ -2.4
RIM1P32445 YOR314W-AYOR314W-A 111 nt0.07□□□□□ -2.4
RIM1P32445 YPL060C-AYPL060C-A 3315 nt0.05□□□□□ -2.4
RIM1P32445 YOR170WYOR170W 306 nt0.02□□□□□ -2.41
RIM1P32445 YOR381W-AYOR381W-A 168 nt0.02□□□□□ -2.41
RIM1P32445 snR8snR8 190 nt0.01□□□□□ -2.41
RIM1P32445 snR46snR46 197 nt0.01□□□□□ -2.41
RIM1P32445 EST1YLR233C 2100 nt-0.03□□□□□ -2.41
RIM1P32445 snR45snR45 172 nt-0.05□□□□□ -2.42
RIM1P32445 YDR210WYDR210W 228 nt-0.09□□□□□ -2.42
RIM1P32445 tM(CAU)Q2tM(CAU)Q2 78 nt-0.1□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 51.5 ms