Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 FYV10YIL097W 1551 nt0.52□□□□□ -2.33
RPB9P27999 YMR272W-AYMR272W-A 114 nt0.51□□□□□ -2.33
RPB9P27999 YPR010C-AYPR010C-A 219 nt0.51□□□□□ -2.33
RPB9P27999 YJL127W-AYJL127W-A 117 nt0.5□□□□□ -2.33
RPB9P27999 AI1Q0050 2505 nt0.49□□□□□ -2.33
RPB9P27999 ULP2YIL031W 3105 nt0.49□□□□□ -2.33
RPB9P27999 snR74snR74 88 nt0.49□□□□□ -2.33
RPB9P27999 YOR161W-AYOR161W-A 81 nt0.49□□□□□ -2.33
RPB9P27999 UTP10YJL109C 5310 nt0.49□□□□□ -2.33
RPB9P27999 YIL134C-AYIL134C-A 204 nt0.48□□□□□ -2.33
RPB9P27999 PRP42YDR235W 1635 nt0.47□□□□□ -2.33
RPB9P27999 PRP5YBR237W 2550 nt0.47□□□□□ -2.33
RPB9P27999 OST4YDL232W 111 nt0.47□□□□□ -2.33
RPB9P27999 PET111YMR257C 2403 nt0.47□□□□□ -2.33
RPB9P27999 BEM3YPL115C 3387 nt0.46□□□□□ -2.34
RPB9P27999 ULI1YFR026C 510 nt0.46□□□□□ -2.34
RPB9P27999 YOR231C-AYOR231C-A 201 nt0.46□□□□□ -2.34
RPB9P27999 snR49snR49 165 nt0.46□□□□□ -2.34
RPB9P27999 LTE1YAL024C 4308 nt0.45□□□□□ -2.34
RPB9P27999 snR55snR55 98 nt0.45□□□□□ -2.34
RPB9P27999 tN(GUU)QtN(GUU)Q 71 nt0.45□□□□□ -2.34
RPB9P27999 FMP27YLR454W 7887 nt0.43□□□□□ -2.34
RPB9P27999 YCR022CYCR022C 345 nt0.43□□□□□ -2.34
RPB9P27999 YPL152W-AYPL152W-A 99 nt0.43□□□□□ -2.34
RPB9P27999 YBR182C-AYBR182C-A 195 nt0.43□□□□□ -2.34
RPB9P27999 HAL9YOL089C 3093 nt0.42□□□□□ -2.34
RPB9P27999 UTP8YGR128C 2142 nt0.42□□□□□ -2.34
RPB9P27999 COX12YLR038C 252 nt0.42□□□□□ -2.34
RPB9P27999 YKU70YMR284W 1809 nt0.42□□□□□ -2.34
RPB9P27999 YCR038W-AYCR038W-A 126 nt0.41□□□□□ -2.34
RPB9P27999 YDR366CYDR366C 399 nt0.41□□□□□ -2.34
RPB9P27999 YER053C-AYER053C-A 114 nt0.41□□□□□ -2.34
RPB9P27999 YER181CYER181C 324 nt0.41□□□□□ -2.34
RPB9P27999 YIR030W-AYIR030W-A 384 nt0.41□□□□□ -2.34
RPB9P27999 YOR192C-BYOR192C-B 5313 nt0.41□□□□□ -2.34
RPB9P27999 YOL155W-AYOL155W-A 135 nt0.4□□□□□ -2.35
RPB9P27999 YOR345CYOR345C 351 nt0.4□□□□□ -2.35
RPB9P27999 NNF2YGR089W 2811 nt0.39□□□□□ -2.35
RPB9P27999 YSP1YHR155W 3687 nt0.39□□□□□ -2.35
RPB9P27999 YHR131W-AYHR131W-A 246 nt0.39□□□□□ -2.35
RPB9P27999 YML099W-AYML099W-A 330 nt0.39□□□□□ -2.35
RPB9P27999 MLP1YKR095W 5628 nt0.38□□□□□ -2.35
RPB9P27999 tF(GAA)QtF(GAA)Q 75 nt0.38□□□□□ -2.35
RPB9P27999 SNU13YEL026W 381 nt0.38□□□□□ -2.35
RPB9P27999 SBH1YER087C-B 249 nt0.38□□□□□ -2.35
RPB9P27999 YIL002W-AYIL002W-A 210 nt0.38□□□□□ -2.35
RPB9P27999 YLR041WYLR041W 321 nt0.38□□□□□ -2.35
RPB9P27999 IQG1YPL242C 4488 nt0.38□□□□□ -2.35
RPB9P27999 YGL188C-AYGL188C-A 141 nt0.37□□□□□ -2.35
RPB9P27999 THO2YNL139C 4794 nt0.36□□□□□ -2.35
RPB9P27999 BUL2YML111W 2763 nt0.35□□□□□ -2.35
RPB9P27999 YLL006W-AYLL006W-A 177 nt0.35□□□□□ -2.35
RPB9P27999 YER078W-AYER078W-A 165 nt0.34□□□□□ -2.36
RPB9P27999 YGL041CYGL041C 204 nt0.34□□□□□ -2.36
RPB9P27999 APQ12YIL040W 417 nt0.33□□□□□ -2.36
RPB9P27999 YLR232WYLR232W 348 nt0.33□□□□□ -2.36
RPB9P27999 ABF2YMR072W 552 nt0.33□□□□□ -2.36
RPB9P27999 YDR371C-AYDR371C-A 105 nt0.31□□□□□ -2.36
RPB9P27999 RPS26AYGL189C 360 nt0.31□□□□□ -2.36
RPB9P27999 YBR072C-AYBR072C-A 162 nt0.31□□□□□ -2.36
RPB9P27999 YBR131C-AYBR131C-A 90 nt0.31□□□□□ -2.36
RPB9P27999 ORC3YLL004W 1851 nt0.29□□□□□ -2.36
RPB9P27999 NIP1YMR309C 2439 nt0.28□□□□□ -2.36
RPB9P27999 TAH1YCR060W 336 nt0.27□□□□□ -2.37
RPB9P27999 CSE1YGL238W 2883 nt0.26□□□□□ -2.37
RPB9P27999 snR8snR8 190 nt0.24□□□□□ -2.37
RPB9P27999 YDR544CYDR544C 429 nt0.24□□□□□ -2.37
RPB9P27999 GLG1YKR058W 1851 nt0.23□□□□□ -2.37
RPB9P27999 snR80snR80 171 nt0.23□□□□□ -2.37
RPB9P27999 YOR302WYOR302W 78 nt0.23□□□□□ -2.37
RPB9P27999 PRP39YML046W 1890 nt0.22□□□□□ -2.37
RPB9P27999 YMR158W-BYMR158W-B 321 nt0.22□□□□□ -2.37
RPB9P27999 YOR186C-AYOR186C-A 210 nt0.22□□□□□ -2.37
RPB9P27999 SDH6YDR379C-A 240 nt0.21□□□□□ -2.38
RPB9P27999 YEL014CYEL014C 306 nt0.21□□□□□ -2.38
RPB9P27999 YJL182CYJL182C 318 nt0.2□□□□□ -2.38
RPB9P27999 YBL039C-AYBL039C-A 84 nt0.2□□□□□ -2.38
RPB9P27999 YGL182CYGL182C 324 nt0.19□□□□□ -2.38
RPB9P27999 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
RPB9P27999 RCO1YMR075W 2055 nt0.18□□□□□ -2.38
RPB9P27999 COG6YNL041C 2520 nt0.17□□□□□ -2.38
RPB9P27999 YEL073CYEL073C 324 nt0.17□□□□□ -2.38
RPB9P27999 MLP2YIL149C 5040 nt0.16□□□□□ -2.38
RPB9P27999 YNL097C-BYNL097C-B 123 nt0.16□□□□□ -2.38
RPB9P27999 YBL100W-BYBL100W-B 5313 nt0.15□□□□□ -2.39
RPB9P27999 snR52snR52 92 nt0.14□□□□□ -2.39
RPB9P27999 YNL054W-BYNL054W-B 5250 nt0.12□□□□□ -2.39
RPB9P27999 YOR381W-AYOR381W-A 168 nt0.12□□□□□ -2.39
RPB9P27999 YLR342W-AYLR342W-A 174 nt0.11□□□□□ -2.39
RPB9P27999 YOR314W-AYOR314W-A 111 nt0.11□□□□□ -2.39
RPB9P27999 YDR406W-AYDR406W-A 246 nt0.1□□□□□ -2.39
RPB9P27999 tM(CAU)Q2tM(CAU)Q2 78 nt0.09□□□□□ -2.4
RPB9P27999 YBR099CYBR099C 384 nt0.09□□□□□ -2.4
RPB9P27999 snR45snR45 172 nt0.08□□□□□ -2.4
RPB9P27999 YOR170WYOR170W 306 nt0.07□□□□□ -2.4
RPB9P27999 snR46snR46 197 nt0.07□□□□□ -2.4
RPB9P27999 YDR210WYDR210W 228 nt0.06□□□□□ -2.4
RPB9P27999 MYO1YHR023W 5787 nt0.04□□□□□ -2.4
RPB9P27999 ESP1YGR098C 4893 nt0.04□□□□□ -2.4
RPB9P27999 EST1YLR233C 2100 nt0.04□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 31.4 ms