Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 TMA7YLR262C-A 195 nt2.43□□□□□ -2.02
SPB4P25808 YLR419WYLR419W 4308 nt2.41□□□□□ -2.02
SPB4P25808 NUP145YGL092W 3954 nt2.4□□□□□ -2.02
SPB4P25808 APL3YBL037W 3078 nt2.4□□□□□ -2.03
SPB4P25808 YLL066W-BYLL066W-B 171 nt2.4□□□□□ -2.03
SPB4P25808 YNL266WYNL266W 420 nt2.4□□□□□ -2.03
SPB4P25808 CHS1YNL192W 3396 nt2.4□□□□□ -2.03
SPB4P25808 YBR072C-AYBR072C-A 162 nt2.39□□□□□ -2.03
SPB4P25808 DGR1YNL130C-A 147 nt2.38□□□□□ -2.03
SPB4P25808 PRP16YKR086W 3216 nt2.38□□□□□ -2.03
SPB4P25808 PEP1YBL017C 4740 nt2.37□□□□□ -2.03
SPB4P25808 YBL005W-BYBL005W-B 5268 nt2.36□□□□□ -2.03
SPB4P25808 TRM732YMR259C 4263 nt2.36□□□□□ -2.03
SPB4P25808 snR45snR45 172 nt2.35□□□□□ -2.03
SPB4P25808 SEC8YPR055W 3198 nt2.34□□□□□ -2.03
SPB4P25808 ANS1YHR126C 480 nt2.34□□□□□ -2.03
SPB4P25808 FAB1YFR019W 6837 nt2.33□□□□□ -2.04
SPB4P25808 YBR200W-AYBR200W-A 165 nt2.32□□□□□ -2.04
SPB4P25808 NUP157YER105C 4176 nt2.31□□□□□ -2.04
SPB4P25808 MSN5YDR335W 3675 nt2.3□□□□□ -2.04
SPB4P25808 snR62snR62 100 nt2.3□□□□□ -2.04
SPB4P25808 PKH3YDR466W 2697 nt2.28□□□□□ -2.04
SPB4P25808 YLR399W-AYLR399W-A 105 nt2.28□□□□□ -2.04
SPB4P25808 BRE1YDL074C 2103 nt2.27□□□□□ -2.05
SPB4P25808 BST1YFL025C 3090 nt2.27□□□□□ -2.05
SPB4P25808 TOR2YKL203C 7425 nt2.26□□□□□ -2.05
SPB4P25808 FKS1YLR342W 5631 nt2.26□□□□□ -2.05
SPB4P25808 IRC20YLR247C 4671 nt2.24□□□□□ -2.05
SPB4P25808 YPL060C-AYPL060C-A 3315 nt2.24□□□□□ -2.05
SPB4P25808 YSP1YHR155W 3687 nt2.22□□□□□ -2.05
SPB4P25808 NEO1YIL048W 3456 nt2.22□□□□□ -2.05
SPB4P25808 YPR160W-AYPR160W-A 81 nt2.21□□□□□ -2.06
SPB4P25808 MON2YNL297C 4911 nt2.21□□□□□ -2.06
SPB4P25808 MSH3YCR092C 3057 nt2.2□□□□□ -2.06
SPB4P25808 EST2YLR318W 2655 nt2.19□□□□□ -2.06
SPB4P25808 YHR214C-BYHR214C-B 5382 nt2.19□□□□□ -2.06
SPB4P25808 ULP2YIL031W 3105 nt2.17□□□□□ -2.06
SPB4P25808 YMR045CYMR045C 5268 nt2.17□□□□□ -2.06
SPB4P25808 AZF1YOR113W 2745 nt2.16□□□□□ -2.06
SPB4P25808 NNF2YGR089W 2811 nt2.14□□□□□ -2.07
SPB4P25808 YBL071C-BYBL071C-B 99 nt2.14□□□□□ -2.07
SPB4P25808 YOL083C-AYOL083C-A 141 nt2.14□□□□□ -2.07
SPB4P25808 YBR196C-AYBR196C-A 150 nt2.14□□□□□ -2.07
SPB4P25808 NUP188YML103C 4968 nt2.14□□□□□ -2.07
SPB4P25808 CDC39YCR093W 6327 nt2.14□□□□□ -2.07
SPB4P25808 GEA2YEL022W 4380 nt2.13□□□□□ -2.07
SPB4P25808 BEM3YPL115C 3387 nt2.12□□□□□ -2.07
SPB4P25808 YMR272W-BYMR272W-B 108 nt2.11□□□□□ -2.07
SPB4P25808 GLG1YKR058W 1851 nt2.11□□□□□ -2.07
SPB4P25808 RPS26AYGL189C 360 nt2.1□□□□□ -2.07
SPB4P25808 tN(GUU)QtN(GUU)Q 71 nt2.1□□□□□ -2.07
SPB4P25808 YMR247W-AYMR247W-A 144 nt2.1□□□□□ -2.07
SPB4P25808 SEC10YLR166C 2616 nt2.09□□□□□ -2.08
SPB4P25808 NUP192YJL039C 5052 nt2.08□□□□□ -2.08
SPB4P25808 BRR2YER172C 6492 nt2.07□□□□□ -2.08
SPB4P25808 CFT1YDR301W 4074 nt2.06□□□□□ -2.08
SPB4P25808 UBP3YER151C 2739 nt2.05□□□□□ -2.08
SPB4P25808 tT(UGU)HtT(UGU)H 72 nt2.03□□□□□ -2.08
SPB4P25808 YBL100W-CYBL100W-C 120 nt2.02□□□□□ -2.09
SPB4P25808 VPS15YBR097W 4365 nt2.02□□□□□ -2.09
SPB4P25808 PMD1YER132C 5262 nt2.02□□□□□ -2.09
SPB4P25808 NST1YNL091W 3723 nt2.02□□□□□ -2.09
SPB4P25808 YOL164W-AYOL164W-A 183 nt1.96□□□□□ -2.1
SPB4P25808 CCH1YGR217W 6120 nt1.93□□□□□ -2.1
SPB4P25808 IRA1YBR140C 9279 nt1.93□□□□□ -2.1
SPB4P25808 YDR034C-AYDR034C-A 177 nt1.93□□□□□ -2.1
SPB4P25808 YGR240C-AYGR240C-A 201 nt1.93□□□□□ -2.1
SPB4P25808 YLR286W-AYLR286W-A 135 nt1.93□□□□□ -2.1
SPB4P25808 PIK1YNL267W 3201 nt1.93□□□□□ -2.1
SPB4P25808 SXM1YDR395W 2835 nt1.92□□□□□ -2.1
SPB4P25808 CAT8YMR280C 4302 nt1.89□□□□□ -2.11
SPB4P25808 BPH1YCR032W 6504 nt1.87□□□□□ -2.11
SPB4P25808 tD(GUC)QtD(GUC)Q 75 nt1.87□□□□□ -2.11
SPB4P25808 SPC110YDR356W 2835 nt1.85□□□□□ -2.11
SPB4P25808 SPT7YBR081C 3999 nt1.85□□□□□ -2.11
SPB4P25808 MEC1YBR136W 7107 nt1.85□□□□□ -2.11
SPB4P25808 YGR130CYGR130C 2451 nt1.83□□□□□ -2.12
SPB4P25808 snR69snR69 101 nt1.82□□□□□ -2.12
SPB4P25808 LAA1YJL207C 6045 nt1.82□□□□□ -2.12
SPB4P25808 CSE1YGL238W 2883 nt1.8□□□□□ -2.12
SPB4P25808 DNF3YMR162C 4971 nt1.79□□□□□ -2.12
SPB4P25808 HUG1YML058W-A 207 nt1.79□□□□□ -2.12
SPB4P25808 EST1YLR233C 2100 nt1.79□□□□□ -2.12
SPB4P25808 YOR093CYOR093C 4947 nt1.77□□□□□ -2.13
SPB4P25808 YLR299C-AYLR299C-A 93 nt1.75□□□□□ -2.13
SPB4P25808 SSK2YNR031C 4740 nt1.75□□□□□ -2.13
SPB4P25808 YPR117WYPR117W 7470 nt1.74□□□□□ -2.13
SPB4P25808 YJL077W-AYJL077W-A 87 nt1.74□□□□□ -2.13
SPB4P25808 YLL006W-AYLL006W-A 177 nt1.74□□□□□ -2.13
SPB4P25808 PET127YOR017W 2403 nt1.74□□□□□ -2.13
SPB4P25808 RDS3YPR094W 324 nt1.73□□□□□ -2.13
SPB4P25808 BUL2YML111W 2763 nt1.73□□□□□ -2.13
SPB4P25808 LTE1YAL024C 4308 nt1.73□□□□□ -2.13
SPB4P25808 tQ(UUG)E2tQ(UUG)E2 72 nt1.72□□□□□ -2.13
SPB4P25808 ORC3YLL004W 1851 nt1.71□□□□□ -2.14
SPB4P25808 snR47snR47 99 nt1.71□□□□□ -2.14
SPB4P25808 HKR1YDR420W 5409 nt1.7□□□□□ -2.14
SPB4P25808 YDL159C-BYDL159C-B 177 nt1.69□□□□□ -2.14
SPB4P25808 snR53snR53 91 nt1.67□□□□□ -2.14
SPB4P25808 FYV8YGR196C 2454 nt1.66□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 39.9 ms