Protein–RNA interactions for Protein: P25594

VBA3, Vacuolar basic amino acid transporter 3, yeastyeast

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA3P25594 CDC39YCR093W 6327 nt1.41□□□□□ -2.18
VBA3P25594 tQ(UUG)E2tQ(UUG)E2 72 nt1.41□□□□□ -2.18
VBA3P25594 YBL039C-AYBL039C-A 84 nt1.4□□□□□ -2.19
VBA3P25594 YCL001W-BYCL001W-B 255 nt1.4□□□□□ -2.19
VBA3P25594 SEC21YNL287W 2808 nt1.4□□□□□ -2.19
VBA3P25594 SEC8YPR055W 3198 nt1.39□□□□□ -2.19
VBA3P25594 tH(GUG)E1tH(GUG)E1 72 nt1.39□□□□□ -2.19
VBA3P25594 tH(GUG)E2tH(GUG)E2 72 nt1.39□□□□□ -2.19
VBA3P25594 tH(GUG)G1tH(GUG)G1 72 nt1.39□□□□□ -2.19
VBA3P25594 tH(GUG)G2tH(GUG)G2 72 nt1.39□□□□□ -2.19
VBA3P25594 tH(GUG)HtH(GUG)H 72 nt1.39□□□□□ -2.19
VBA3P25594 tH(GUG)KtH(GUG)K 72 nt1.39□□□□□ -2.19
VBA3P25594 tH(GUG)MtH(GUG)M 72 nt1.39□□□□□ -2.19
VBA3P25594 YLR041WYLR041W 321 nt1.39□□□□□ -2.19
VBA3P25594 LAA1YJL207C 6045 nt1.38□□□□□ -2.19
VBA3P25594 PIK1YNL267W 3201 nt1.38□□□□□ -2.19
VBA3P25594 SSK2YNR031C 4740 nt1.37□□□□□ -2.19
VBA3P25594 PRP16YKR086W 3216 nt1.37□□□□□ -2.19
VBA3P25594 CHS6YJL099W 2241 nt1.36□□□□□ -2.19
VBA3P25594 YGR130CYGR130C 2451 nt1.35□□□□□ -2.19
VBA3P25594 RPM2YML091C 3609 nt1.35□□□□□ -2.19
VBA3P25594 PET127YOR017W 2403 nt1.35□□□□□ -2.19
VBA3P25594 TAH1YCR060W 336 nt1.34□□□□□ -2.19
VBA3P25594 FYV8YGR196C 2454 nt1.34□□□□□ -2.2
VBA3P25594 FYV10YIL097W 1551 nt1.34□□□□□ -2.2
VBA3P25594 YLR399W-AYLR399W-A 105 nt1.33□□□□□ -2.2
VBA3P25594 YOR329W-AYOR329W-A 210 nt1.33□□□□□ -2.2
VBA3P25594 HKR1YDR420W 5409 nt1.31□□□□□ -2.2
VBA3P25594 YIL071W-AYIL071W-A 477 nt1.29□□□□□ -2.2
VBA3P25594 YPR160W-AYPR160W-A 81 nt1.29□□□□□ -2.2
VBA3P25594 OST4YDL232W 111 nt1.28□□□□□ -2.2
VBA3P25594 IML1YJR138W 4755 nt1.28□□□□□ -2.2
VBA3P25594 snR39BsnR39B 96 nt1.27□□□□□ -2.21
VBA3P25594 RAD9YDR217C 3930 nt1.26□□□□□ -2.21
VBA3P25594 QCR9YGR183C 201 nt1.26□□□□□ -2.21
VBA3P25594 YLR232WYLR232W 348 nt1.26□□□□□ -2.21
VBA3P25594 YNL067W-BYNL067W-B 141 nt1.26□□□□□ -2.21
VBA3P25594 NST1YNL091W 3723 nt1.25□□□□□ -2.21
VBA3P25594 YCR095W-AYCR095W-A 159 nt1.23□□□□□ -2.21
VBA3P25594 YHR131W-AYHR131W-A 246 nt1.23□□□□□ -2.21
VBA3P25594 YBR099CYBR099C 384 nt1.23□□□□□ -2.21
VBA3P25594 SIP4YJL089W 2490 nt1.22□□□□□ -2.21
VBA3P25594 YDR544CYDR544C 429 nt1.21□□□□□ -2.22
VBA3P25594 SOM1YEL059C-A 225 nt1.21□□□□□ -2.22
VBA3P25594 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
VBA3P25594 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
VBA3P25594 YSP1YHR155W 3687 nt1.21□□□□□ -2.22
VBA3P25594 COG6YNL041C 2520 nt1.2□□□□□ -2.22
VBA3P25594 tN(GUU)QtN(GUU)Q 71 nt1.19□□□□□ -2.22
VBA3P25594 YNL284C-BYNL284C-B 5268 nt1.18□□□□□ -2.22
VBA3P25594 tM(CAU)Q2tM(CAU)Q2 78 nt1.18□□□□□ -2.22
VBA3P25594 UBP3YER151C 2739 nt1.18□□□□□ -2.22
VBA3P25594 SCC2YDR180W 4482 nt1.18□□□□□ -2.22
VBA3P25594 SPT7YBR081C 3999 nt1.17□□□□□ -2.22
VBA3P25594 BEM3YPL115C 3387 nt1.16□□□□□ -2.22
VBA3P25594 YDL073WYDL073W 2955 nt1.16□□□□□ -2.22
VBA3P25594 YDR210WYDR210W 228 nt1.16□□□□□ -2.22
VBA3P25594 SEC1YDR164C 2175 nt1.14□□□□□ -2.23
VBA3P25594 PMP2YEL017C-A 132 nt1.13□□□□□ -2.23
VBA3P25594 LTE1YAL024C 4308 nt1.13□□□□□ -2.23
VBA3P25594 YNL103W-AYNL103W-A 90 nt1.12□□□□□ -2.23
VBA3P25594 STF2YGR008C 255 nt1.11□□□□□ -2.23
VBA3P25594 YJL127W-AYJL127W-A 117 nt1.1□□□□□ -2.23
VBA3P25594 TFB5YDR079C-A 219 nt1.08□□□□□ -2.24
VBA3P25594 YGR146C-AYGR146C-A 162 nt1.08□□□□□ -2.24
VBA3P25594 HUG1YML058W-A 207 nt1.08□□□□□ -2.24
VBA3P25594 YBL109WYBL109W 336 nt1.08□□□□□ -2.24
VBA3P25594 ULP2YIL031W 3105 nt1.07□□□□□ -2.24
VBA3P25594 YDR524C-AYDR524C-A 120 nt1.07□□□□□ -2.24
VBA3P25594 RCO1YMR075W 2055 nt1.06□□□□□ -2.24
VBA3P25594 YPR117WYPR117W 7470 nt1.06□□□□□ -2.24
VBA3P25594 YJR029WYJR029W 5268 nt1.06□□□□□ -2.24
VBA3P25594 YPR137C-BYPR137C-B 5268 nt1.06□□□□□ -2.24
VBA3P25594 snR61snR61 90 nt1.04□□□□□ -2.24
VBA3P25594 YBR178WYBR178W 375 nt1.03□□□□□ -2.24
VBA3P25594 BEM2YER155C 6504 nt1.03□□□□□ -2.24
VBA3P25594 BIR1YJR089W 2865 nt1.03□□□□□ -2.24
VBA3P25594 GLG1YKR058W 1851 nt1.03□□□□□ -2.25
VBA3P25594 RKR1YMR247C 4689 nt1.02□□□□□ -2.25
VBA3P25594 YBR072C-AYBR072C-A 162 nt1.02□□□□□ -2.25
VBA3P25594 NNF2YGR089W 2811 nt1.01□□□□□ -2.25
VBA3P25594 YMR326CYMR326C 309 nt1□□□□□ -2.25
VBA3P25594 VAM6YDL077C 3150 nt1□□□□□ -2.25
VBA3P25594 BUD3YCL014W 4911 nt0.99□□□□□ -2.25
VBA3P25594 YPL060C-AYPL060C-A 3315 nt0.97□□□□□ -2.25
VBA3P25594 YNL266WYNL266W 420 nt0.97□□□□□ -2.25
VBA3P25594 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
VBA3P25594 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
VBA3P25594 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
VBA3P25594 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
VBA3P25594 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
VBA3P25594 YLL006W-AYLL006W-A 177 nt0.95□□□□□ -2.26
VBA3P25594 YHR217CYHR217C 462 nt0.94□□□□□ -2.26
VBA3P25594 PAU24YBR301W 363 nt0.94□□□□□ -2.26
VBA3P25594 YGL041C-BYGL041C-B 183 nt0.92□□□□□ -2.26
VBA3P25594 DOP1YDR141C 5097 nt0.92□□□□□ -2.26
VBA3P25594 BUL2YML111W 2763 nt0.91□□□□□ -2.26
VBA3P25594 SBH1YER087C-B 249 nt0.9□□□□□ -2.27
VBA3P25594 YIL142C-AYIL142C-A 333 nt0.88□□□□□ -2.27
VBA3P25594 MLP1YKR095W 5628 nt0.88□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 31.7 ms