Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 SSK2YNR031C 4740 nt1.87□□□□□ -2.11
PUF4P25339 KAP122YGL016W 3246 nt1.85□□□□□ -2.11
PUF4P25339 ROM2YLR371W 4071 nt1.85□□□□□ -2.11
PUF4P25339 PKH3YDR466W 2697 nt1.84□□□□□ -2.11
PUF4P25339 CCH1YGR217W 6120 nt1.83□□□□□ -2.12
PUF4P25339 YDR210WYDR210W 228 nt1.83□□□□□ -2.12 RIP-Chip
PUF4P25339 YLR041WYLR041W 321 nt1.83□□□□□ -2.12
PUF4P25339 MON2YNL297C 4911 nt1.82□□□□□ -2.12
PUF4P25339 KAP120YPL125W 3099 nt1.81□□□□□ -2.12
PUF4P25339 TRM732YMR259C 4263 nt1.81□□□□□ -2.12 RIP-Chip
PUF4P25339 tM(CAU)Q2tM(CAU)Q2 78 nt1.8□□□□□ -2.12
PUF4P25339 BRR2YER172C 6492 nt1.8□□□□□ -2.12
PUF4P25339 APL3YBL037W 3078 nt1.8□□□□□ -2.12
PUF4P25339 YML002WYML002W 2214 nt1.79□□□□□ -2.12
PUF4P25339 CLU1YMR012W 3834 nt1.79□□□□□ -2.12
PUF4P25339 YAL037C-AYAL037C-A 93 nt1.79□□□□□ -2.12
PUF4P25339 BST1YFL025C 3090 nt1.78□□□□□ -2.12
PUF4P25339 ASE1YOR058C 2658 nt1.78□□□□□ -2.12
PUF4P25339 SET3YKR029C 2256 nt1.78□□□□□ -2.12
PUF4P25339 NOP9YJL010C 2001 nt1.78□□□□□ -2.12
PUF4P25339 BIR1YJR089W 2865 nt1.77□□□□□ -2.13
PUF4P25339 STO1YMR125W 2586 nt1.77□□□□□ -2.13
PUF4P25339 YBR072C-AYBR072C-A 162 nt1.77□□□□□ -2.13
PUF4P25339 CFT1YDR301W 4074 nt1.76□□□□□ -2.13
PUF4P25339 CHS1YNL192W 3396 nt1.76□□□□□ -2.13
PUF4P25339 SEC21YNL287W 2808 nt1.76□□□□□ -2.13
PUF4P25339 snR62snR62 100 nt1.76□□□□□ -2.13
PUF4P25339 SWI4YER111C 3282 nt1.76□□□□□ -2.13
PUF4P25339 RPM2YML091C 3609 nt1.74□□□□□ -2.13
PUF4P25339 FYV10YIL097W 1551 nt1.74□□□□□ -2.13
PUF4P25339 YNL266WYNL266W 420 nt1.74□□□□□ -2.13
PUF4P25339 WAR1YML076C 2835 nt1.74□□□□□ -2.13
PUF4P25339 RPL26BYGR034W 384 nt1.73□□□□□ -2.13
PUF4P25339 YJL127W-AYJL127W-A 117 nt1.73□□□□□ -2.13
PUF4P25339 SEC1YDR164C 2175 nt1.73□□□□□ -2.13
PUF4P25339 NUP145YGL092W 3954 nt1.73□□□□□ -2.13
PUF4P25339 YLR232WYLR232W 348 nt1.72□□□□□ -2.13
PUF4P25339 snR190snR190 190 nt1.72□□□□□ -2.13
PUF4P25339 AZF1YOR113W 2745 nt1.72□□□□□ -2.13
PUF4P25339 SEC3YER008C 4011 nt1.71□□□□□ -2.14
PUF4P25339 PAU12YGR294W 363 nt1.71□□□□□ -2.14
PUF4P25339 PAU24YBR301W 363 nt1.71□□□□□ -2.14
PUF4P25339 RAD9YDR217C 3930 nt1.71□□□□□ -2.14
PUF4P25339 YNL284C-BYNL284C-B 5268 nt1.7□□□□□ -2.14
PUF4P25339 MEC1YBR136W 7107 nt1.7□□□□□ -2.14
PUF4P25339 YBR200W-AYBR200W-A 165 nt1.7□□□□□ -2.14
PUF4P25339 MSH3YCR092C 3057 nt1.7□□□□□ -2.14
PUF4P25339 YBL071C-BYBL071C-B 99 nt1.69□□□□□ -2.14
PUF4P25339 YOL083C-AYOL083C-A 141 nt1.69□□□□□ -2.14
PUF4P25339 YGR146C-AYGR146C-A 162 nt1.68□□□□□ -2.14
PUF4P25339 YDL073WYDL073W 2955 nt1.67□□□□□ -2.14
PUF4P25339 VPS15YBR097W 4365 nt1.66□□□□□ -2.14
PUF4P25339 SPC110YDR356W 2835 nt1.66□□□□□ -2.14
PUF4P25339 YGR130CYGR130C 2451 nt1.65□□□□□ -2.15
PUF4P25339 EST2YLR318W 2655 nt1.64□□□□□ -2.15
PUF4P25339 FYV8YGR196C 2454 nt1.64□□□□□ -2.15
PUF4P25339 GEA2YEL022W 4380 nt1.63□□□□□ -2.15
PUF4P25339 NUP188YML103C 4968 nt1.61□□□□□ -2.15
PUF4P25339 RPS26AYGL189C 360 nt1.61□□□□□ -2.15
PUF4P25339 MSN5YDR335W 3675 nt1.61□□□□□ -2.15
PUF4P25339 SEC8YPR055W 3198 nt1.59□□□□□ -2.15
PUF4P25339 YDR034C-AYDR034C-A 177 nt1.59□□□□□ -2.15
PUF4P25339 CDC39YCR093W 6327 nt1.58□□□□□ -2.16 RIP-Chip
PUF4P25339 CAT8YMR280C 4302 nt1.57□□□□□ -2.16
PUF4P25339 IRA1YBR140C 9279 nt1.56□□□□□ -2.16
PUF4P25339 tQ(UUG)E2tQ(UUG)E2 72 nt1.55□□□□□ -2.16
PUF4P25339 YOL164W-AYOL164W-A 183 nt1.55□□□□□ -2.16
PUF4P25339 PRP16YKR086W 3216 nt1.55□□□□□ -2.16
PUF4P25339 NNF2YGR089W 2811 nt1.55□□□□□ -2.16
PUF4P25339 PET127YOR017W 2403 nt1.55□□□□□ -2.16
PUF4P25339 YBR196C-AYBR196C-A 150 nt1.54□□□□□ -2.16
PUF4P25339 PIK1YNL267W 3201 nt1.54□□□□□ -2.16
PUF4P25339 LAA1YJL207C 6045 nt1.54□□□□□ -2.16
PUF4P25339 YLR399W-AYLR399W-A 105 nt1.53□□□□□ -2.16
PUF4P25339 tN(GUU)QtN(GUU)Q 71 nt1.52□□□□□ -2.17
PUF4P25339 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
PUF4P25339 YGR240C-AYGR240C-A 201 nt1.51□□□□□ -2.17
PUF4P25339 YPR160W-AYPR160W-A 81 nt1.51□□□□□ -2.17
PUF4P25339 SEC10YLR166C 2616 nt1.5□□□□□ -2.17
PUF4P25339 IML1YJR138W 4755 nt1.5□□□□□ -2.17
PUF4P25339 UBP3YER151C 2739 nt1.49□□□□□ -2.17
PUF4P25339 YLR286W-AYLR286W-A 135 nt1.48□□□□□ -2.17
PUF4P25339 BEM3YPL115C 3387 nt1.48□□□□□ -2.17
PUF4P25339 ORC3YLL004W 1851 nt1.47□□□□□ -2.17
PUF4P25339 DOP1YDR141C 5097 nt1.47□□□□□ -2.17
PUF4P25339 GLG1YKR058W 1851 nt1.46□□□□□ -2.18
PUF4P25339 YBL100W-CYBL100W-C 120 nt1.46□□□□□ -2.18
PUF4P25339 YSP1YHR155W 3687 nt1.46□□□□□ -2.18
PUF4P25339 snR47snR47 99 nt1.43□□□□□ -2.18
PUF4P25339 YPL060C-AYPL060C-A 3315 nt1.42□□□□□ -2.18
PUF4P25339 UTP20YBL004W 7482 nt1.4□□□□□ -2.19 RIP-Chip
PUF4P25339 ULP2YIL031W 3105 nt1.38□□□□□ -2.19
PUF4P25339 snR53snR53 91 nt1.37□□□□□ -2.19
PUF4P25339 tD(GUC)QtD(GUC)Q 75 nt1.36□□□□□ -2.19
PUF4P25339 EST1YLR233C 2100 nt1.35□□□□□ -2.19
PUF4P25339 YPR117WYPR117W 7470 nt1.34□□□□□ -2.19
PUF4P25339 MYO1YHR023W 5787 nt1.34□□□□□ -2.19
PUF4P25339 tF(GAA)BtF(GAA)B 73 nt1.34□□□□□ -2.19
PUF4P25339 tF(GAA)FtF(GAA)F 73 nt1.34□□□□□ -2.19
PUF4P25339 tF(GAA)GtF(GAA)G 73 nt1.34□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms