Protein–RNA interactions for Protein: P0CX20

YRF1-1, Y' element ATP-dependent helicase protein 1 copy 1, yeastyeast

Predictions only

Length 1,796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1P0CX20 YLR456WYLR456W 615 nt-1.39□□□□□ -2.63
YRF1-1P0CX20 YGR174W-AYGR174W-A 87 nt-1.42□□□□□ -2.64
YRF1-1P0CX20 tP(UGG)QtP(UGG)Q 72 nt-1.44□□□□□ -2.64
YRF1-1P0CX20 YER053C-AYER053C-A 114 nt-1.44□□□□□ -2.64
YRF1-1P0CX20 YFR009W-AYFR009W-A 258 nt-1.44□□□□□ -2.64
YRF1-1P0CX20 PCC1YKR095W-A 267 nt-1.46□□□□□ -2.64
YRF1-1P0CX20 YAR047CYAR047C 321 nt-1.46□□□□□ -2.64
YRF1-1P0CX20 VPS20YMR077C 666 nt-1.46□□□□□ -2.64
YRF1-1P0CX20 YGL052WYGL052W 306 nt-1.48□□□□□ -2.65
YRF1-1P0CX20 YOR170WYOR170W 306 nt-1.48□□□□□ -2.65
YRF1-1P0CX20 snR189snR189 189 nt-1.5□□□□□ -2.65
YRF1-1P0CX20 YBR285WYBR285W 435 nt-1.5□□□□□ -2.65
YRF1-1P0CX20 YOL166W-AYOL166W-A 156 nt-1.51□□□□□ -2.65
YRF1-1P0CX20 RPS27BYHR021C 249 nt-1.52□□□□□ -2.65
YRF1-1P0CX20 TOM22YNL131W 459 nt-1.53□□□□□ -2.65
YRF1-1P0CX20 YGR069WYGR069W 336 nt-1.54□□□□□ -2.66
YRF1-1P0CX20 YOR121CYOR121C 306 nt-1.54□□□□□ -2.66
YRF1-1P0CX20 tY(GUA)QtY(GUA)Q 84 nt-1.56□□□□□ -2.66
YRF1-1P0CX20 CSE2YNR010W 450 nt-1.56□□□□□ -2.66
YRF1-1P0CX20 GPI15YNL038W 690 nt-1.57□□□□□ -2.66
YRF1-1P0CX20 PRM3YPL192C 402 nt-1.57□□□□□ -2.66
YRF1-1P0CX20 YLL019W-AYLL019W-A 93 nt-1.58□□□□□ -2.66
YRF1-1P0CX20 YLR269CYLR269C 351 nt-1.59□□□□□ -2.66
YRF1-1P0CX20 YJL077W-AYJL077W-A 87 nt-1.61□□□□□ -2.67
YRF1-1P0CX20 YMR193C-AYMR193C-A 387 nt-1.61□□□□□ -2.67
YRF1-1P0CX20 YAF9YNL107W 681 nt-1.62□□□□□ -2.67
YRF1-1P0CX20 YER090C-AYER090C-A 90 nt-1.62□□□□□ -2.67
YRF1-1P0CX20 SKI7YOR076C 2244 nt-1.63□□□□□ -2.67
YRF1-1P0CX20 JLP2YMR132C 627 nt-1.63□□□□□ -2.67
YRF1-1P0CX20 YIL115W-AYIL115W-A 372 nt-1.64□□□□□ -2.67
YRF1-1P0CX20 YDR544CYDR544C 429 nt-1.64□□□□□ -2.67
YRF1-1P0CX20 YHR125WYHR125W 306 nt-1.64□□□□□ -2.67
YRF1-1P0CX20 YAL066WYAL066W 309 nt-1.64□□□□□ -2.67
YRF1-1P0CX20 snR74snR74 88 nt-1.65□□□□□ -2.67
YRF1-1P0CX20 YGL149WYGL149W 306 nt-1.66□□□□□ -2.68
YRF1-1P0CX20 YJL197C-AYJL197C-A 282 nt-1.67□□□□□ -2.68
YRF1-1P0CX20 snR54snR54 86 nt-1.67□□□□□ -2.68
YRF1-1P0CX20 YNL266WYNL266W 420 nt-1.7□□□□□ -2.68
YRF1-1P0CX20 tQ(UUG)QtQ(UUG)Q 76 nt-1.7□□□□□ -2.68
YRF1-1P0CX20 YOR314W-AYOR314W-A 111 nt-1.7□□□□□ -2.68
YRF1-1P0CX20 YPR016W-AYPR016W-A 261 nt-1.72□□□□□ -2.68
YRF1-1P0CX20 BI2Q0110 1272 nt-1.72□□□□□ -2.69
YRF1-1P0CX20 YJL047C-AYJL047C-A 135 nt-1.73□□□□□ -2.69
YRF1-1P0CX20 YER006C-AYER006C-A 318 nt-1.76□□□□□ -2.69
YRF1-1P0CX20 snR81snR81 201 nt-1.77□□□□□ -2.69
YRF1-1P0CX20 CDC65tQ(CUG)M 72 nt-1.77□□□□□ -2.69
YRF1-1P0CX20 PMP2YEL017C-A 132 nt-1.8□□□□□ -2.7
YRF1-1P0CX20 YBL039C-AYBL039C-A 84 nt-1.8□□□□□ -2.7
YRF1-1P0CX20 YOR072W-BYOR072W-B 162 nt-1.81□□□□□ -2.7
YRF1-1P0CX20 snR77snR77 88 nt-1.82□□□□□ -2.7
YRF1-1P0CX20 EAF6YJR082C 342 nt-1.82□□□□□ -2.7
YRF1-1P0CX20 YOL038C-AYOL038C-A 96 nt-1.82□□□□□ -2.7
YRF1-1P0CX20 HMRA1YCR097W 381 nt-1.85□□□□□ -2.7
YRF1-1P0CX20 YBR126W-BYBR126W-B 144 nt-1.85□□□□□ -2.7
YRF1-1P0CX20 YGR240C-AYGR240C-A 201 nt-1.86□□□□□ -2.71
YRF1-1P0CX20 snR50snR50 90 nt-1.86□□□□□ -2.71
YRF1-1P0CX20 CSN9YDR179C 489 nt-1.88□□□□□ -2.71
YRF1-1P0CX20 snR69snR69 101 nt-1.89□□□□□ -2.71
YRF1-1P0CX20 YER137W-AYER137W-A 306 nt-1.89□□□□□ -2.71
YRF1-1P0CX20 MPC1YGL080W 393 nt-1.89□□□□□ -2.71
YRF1-1P0CX20 YNL205CYNL205C 423 nt-1.89□□□□□ -2.71
YRF1-1P0CX20 RDS3YPR094W 324 nt-1.9□□□□□ -2.71
YRF1-1P0CX20 YML099W-AYML099W-A 330 nt-1.9□□□□□ -2.71
YRF1-1P0CX20 YDR102CYDR102C 333 nt-1.93□□□□□ -2.72
YRF1-1P0CX20 snR67snR67 82 nt-1.95□□□□□ -2.72
YRF1-1P0CX20 YDL158CYDL158C 309 nt-1.95□□□□□ -2.72
YRF1-1P0CX20 YML054C-AYML054C-A 159 nt-1.95□□□□□ -2.72
YRF1-1P0CX20 YDR543CYDR543C 300 nt-1.96□□□□□ -2.72
YRF1-1P0CX20 YAL068W-AYAL068W-A 255 nt-1.96□□□□□ -2.72
YRF1-1P0CX20 YLR202CYLR202C 327 nt-1.96□□□□□ -2.72
YRF1-1P0CX20 Q0142Q0142 177 nt-1.98□□□□□ -2.73
YRF1-1P0CX20 YER097WYER097W 330 nt-2.03□□□□□ -2.73
YRF1-1P0CX20 snR39BsnR39B 96 nt-2.05□□□□□ -2.74
YRF1-1P0CX20 snR60snR60 104 nt-2.06□□□□□ -2.74
YRF1-1P0CX20 YFL032WYFL032W 321 nt-2.08□□□□□ -2.74
YRF1-1P0CX20 YNL028WYNL028W 318 nt-2.08□□□□□ -2.74
YRF1-1P0CX20 YDR048CYDR048C 315 nt-2.09□□□□□ -2.74
YRF1-1P0CX20 tD(GUC)QtD(GUC)Q 75 nt-2.09□□□□□ -2.74
YRF1-1P0CX20 YLR434CYLR434C 384 nt-2.1□□□□□ -2.75
YRF1-1P0CX20 STE18YJR086W 333 nt-2.1□□□□□ -2.75
YRF1-1P0CX20 YOR293C-AYOR293C-A 150 nt-2.1□□□□□ -2.75
YRF1-1P0CX20 YGR146C-AYGR146C-A 162 nt-2.11□□□□□ -2.75
YRF1-1P0CX20 YMR001C-AYMR001C-A 231 nt-2.11□□□□□ -2.75
YRF1-1P0CX20 Q0255Q0255 1419 nt-2.12□□□□□ -2.75
YRF1-1P0CX20 YFL019CYFL019C 354 nt-2.13□□□□□ -2.75
YRF1-1P0CX20 snR41snR41 95 nt-2.14□□□□□ -2.75
YRF1-1P0CX20 YMR315W-AYMR315W-A 108 nt-2.15□□□□□ -2.75
YRF1-1P0CX20 YNL324WYNL324W 396 nt-2.15□□□□□ -2.75
YRF1-1P0CX20 ATP6Q0085 780 nt-2.15□□□□□ -2.75
YRF1-1P0CX20 YLR285C-AYLR285C-A 171 nt-2.15□□□□□ -2.75
YRF1-1P0CX20 YOR008C-AYOR008C-A 225 nt-2.15□□□□□ -2.75
YRF1-1P0CX20 YBR182C-AYBR182C-A 195 nt-2.17□□□□□ -2.76
YRF1-1P0CX20 YKL123WYKL123W 381 nt-2.18□□□□□ -2.76
YRF1-1P0CX20 tM(CAU)Q2tM(CAU)Q2 78 nt-2.19□□□□□ -2.76
YRF1-1P0CX20 YBR196C-AYBR196C-A 150 nt-2.19□□□□□ -2.76
YRF1-1P0CX20 YLR342W-AYLR342W-A 174 nt-2.22□□□□□ -2.76
YRF1-1P0CX20 YNL122CYNL122C 348 nt-2.23□□□□□ -2.77
YRF1-1P0CX20 YKL063CYKL063C 504 nt-2.24□□□□□ -2.77
YRF1-1P0CX20 YLR286W-AYLR286W-A 135 nt-2.26□□□□□ -2.77
YRF1-1P0CX20 YLR406C-AYLR406C-A 150 nt-2.26□□□□□ -2.77
Retrieved 100 of 7,029 protein–RNA pairs in 44.8 ms