Protein–RNA interactions for Protein: P0CG63

UBI4, Polyubiquitin, yeastyeast

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBI4P0CG63 RPM2YML091C 3609 nt-0.94□□□□□ -2.56
UBI4P0CG63 tA(UGC)QtA(UGC)Q 76 nt-0.95□□□□□ -2.56
UBI4P0CG63 YMR193C-AYMR193C-A 387 nt-0.96□□□□□ -2.56
UBI4P0CG63 YLR264C-AYLR264C-A 117 nt-0.97□□□□□ -2.56
UBI4P0CG63 YNR025CYNR025C 360 nt-0.97□□□□□ -2.56
UBI4P0CG63 tT(UGU)G1tT(UGU)G1 72 nt-0.98□□□□□ -2.57
UBI4P0CG63 tT(UGU)G2tT(UGU)G2 72 nt-0.98□□□□□ -2.57
UBI4P0CG63 tT(UGU)PtT(UGU)P 72 nt-0.98□□□□□ -2.57
UBI4P0CG63 tR(UCU)Q1tR(UCU)Q1 73 nt-0.99□□□□□ -2.57
UBI4P0CG63 YIL115W-AYIL115W-A 372 nt-0.99□□□□□ -2.57
UBI4P0CG63 PAU9YBL108C-A 129 nt-0.99□□□□□ -2.57
UBI4P0CG63 YJL113WYJL113W 4647 nt-0.99□□□□□ -2.57
UBI4P0CG63 YJL197C-AYJL197C-A 282 nt-1□□□□□ -2.57
UBI4P0CG63 YLR434CYLR434C 384 nt-1□□□□□ -2.57
UBI4P0CG63 YER053C-AYER053C-A 114 nt-1.01□□□□□ -2.57
UBI4P0CG63 YER079WYER079W 633 nt-1.01□□□□□ -2.57
UBI4P0CG63 snR78snR78 87 nt-1.02□□□□□ -2.57
UBI4P0CG63 YHL009W-BYHL009W-B 5409 nt-1.02□□□□□ -2.57
UBI4P0CG63 YGR069WYGR069W 336 nt-1.04□□□□□ -2.58
UBI4P0CG63 YLL019W-AYLL019W-A 93 nt-1.04□□□□□ -2.58
UBI4P0CG63 YOL013W-BYOL013W-B 291 nt-1.04□□□□□ -2.58
UBI4P0CG63 APQ12YIL040W 417 nt-1.07□□□□□ -2.58
UBI4P0CG63 YML100W-AYML100W-A 174 nt-1.08□□□□□ -2.58
UBI4P0CG63 snR36snR36 182 nt-1.12□□□□□ -2.59
UBI4P0CG63 YDR048CYDR048C 315 nt-1.13□□□□□ -2.59
UBI4P0CG63 YIL002W-AYIL002W-A 210 nt-1.13□□□□□ -2.59
UBI4P0CG63 YER137W-AYER137W-A 306 nt-1.15□□□□□ -2.59
UBI4P0CG63 YJL182CYJL182C 318 nt-1.16□□□□□ -2.6
UBI4P0CG63 YOR072W-BYOR072W-B 162 nt-1.16□□□□□ -2.6
UBI4P0CG63 COG6YNL041C 2520 nt-1.17□□□□□ -2.6
UBI4P0CG63 YDR544CYDR544C 429 nt-1.17□□□□□ -2.6
UBI4P0CG63 YPR016W-AYPR016W-A 261 nt-1.17□□□□□ -2.6
UBI4P0CG63 HMRA1YCR097W 381 nt-1.19□□□□□ -2.6
UBI4P0CG63 YLR202CYLR202C 327 nt-1.21□□□□□ -2.6
UBI4P0CG63 YLR406C-AYLR406C-A 150 nt-1.21□□□□□ -2.6
UBI4P0CG63 snR60snR60 104 nt-1.22□□□□□ -2.6
UBI4P0CG63 TAH1YCR060W 336 nt-1.22□□□□□ -2.6
UBI4P0CG63 snR49snR49 165 nt-1.22□□□□□ -2.6
UBI4P0CG63 YCR038W-AYCR038W-A 126 nt-1.23□□□□□ -2.61
UBI4P0CG63 YLR154W-FYLR154W-F 141 nt-1.23□□□□□ -2.61
UBI4P0CG63 YOR121CYOR121C 306 nt-1.23□□□□□ -2.61
UBI4P0CG63 tW(UCA)QtW(UCA)Q 74 nt-1.24□□□□□ -2.61
UBI4P0CG63 YMR001C-AYMR001C-A 231 nt-1.24□□□□□ -2.61
UBI4P0CG63 YGL052WYGL052W 306 nt-1.25□□□□□ -2.61
UBI4P0CG63 YKL063CYKL063C 504 nt-1.25□□□□□ -2.61
UBI4P0CG63 ATP19YOL077W-A 207 nt-1.25□□□□□ -2.61
UBI4P0CG63 YJL077W-AYJL077W-A 87 nt-1.26□□□□□ -2.61
UBI4P0CG63 YPL060C-AYPL060C-A 3315 nt-1.27□□□□□ -2.61
UBI4P0CG63 BIL1YOR304C-A 231 nt-1.28□□□□□ -2.61
UBI4P0CG63 snR161snR161 161 nt-1.28□□□□□ -2.61
UBI4P0CG63 YPR010C-AYPR010C-A 219 nt-1.28□□□□□ -2.61
UBI4P0CG63 YDL158CYDL158C 309 nt-1.29□□□□□ -2.62
UBI4P0CG63 YGL182CYGL182C 324 nt-1.3□□□□□ -2.62
UBI4P0CG63 YOR015WYOR015W 360 nt-1.31□□□□□ -2.62
UBI4P0CG63 YOR170WYOR170W 306 nt-1.31□□□□□ -2.62
UBI4P0CG63 YBR285WYBR285W 435 nt-1.31□□□□□ -2.62
UBI4P0CG63 YEL050W-AYEL050W-A 192 nt-1.32□□□□□ -2.62
UBI4P0CG63 YGL149WYGL149W 306 nt-1.32□□□□□ -2.62
UBI4P0CG63 tP(UGG)QtP(UGG)Q 72 nt-1.32□□□□□ -2.62
UBI4P0CG63 YAF9YNL107W 681 nt-1.32□□□□□ -2.62
UBI4P0CG63 YOR314W-AYOR314W-A 111 nt-1.34□□□□□ -2.62
UBI4P0CG63 YIL032CYIL032C 357 nt-1.36□□□□□ -2.63
UBI4P0CG63 YML099W-AYML099W-A 330 nt-1.36□□□□□ -2.63
UBI4P0CG63 YNL028WYNL028W 318 nt-1.36□□□□□ -2.63
UBI4P0CG63 tQ(UUG)QtQ(UUG)Q 76 nt-1.37□□□□□ -2.63
UBI4P0CG63 YBL039C-AYBL039C-A 84 nt-1.39□□□□□ -2.63
UBI4P0CG63 HTL1YCR020W-B 237 nt-1.41□□□□□ -2.64
UBI4P0CG63 YNL324WYNL324W 396 nt-1.41□□□□□ -2.64
UBI4P0CG63 YBR223W-AYBR223W-A 120 nt-1.41□□□□□ -2.64
UBI4P0CG63 YAL063C-AYAL063C-A 291 nt-1.46□□□□□ -2.64
UBI4P0CG63 snR74snR74 88 nt-1.47□□□□□ -2.64
UBI4P0CG63 JLP2YMR132C 627 nt-1.49□□□□□ -2.65
UBI4P0CG63 YGR035CYGR035C 351 nt-1.5□□□□□ -2.65
UBI4P0CG63 YLR120W-AYLR120W-A 102 nt-1.5□□□□□ -2.65
UBI4P0CG63 snR69snR69 101 nt-1.51□□□□□ -2.65
UBI4P0CG63 YNL266WYNL266W 420 nt-1.52□□□□□ -2.65
UBI4P0CG63 snR50snR50 90 nt-1.52□□□□□ -2.65
UBI4P0CG63 ATP6Q0085 780 nt-1.53□□□□□ -2.65
UBI4P0CG63 YER090C-AYER090C-A 90 nt-1.53□□□□□ -2.65
UBI4P0CG63 YDR102CYDR102C 333 nt-1.55□□□□□ -2.66
UBI4P0CG63 YFL032WYFL032W 321 nt-1.56□□□□□ -2.66
UBI4P0CG63 YAL068W-AYAL068W-A 255 nt-1.56□□□□□ -2.66
UBI4P0CG63 SKI7YOR076C 2244 nt-1.59□□□□□ -2.66
UBI4P0CG63 snR189snR189 189 nt-1.59□□□□□ -2.66
UBI4P0CG63 RDS3YPR094W 324 nt-1.61□□□□□ -2.67
UBI4P0CG63 YER097WYER097W 330 nt-1.63□□□□□ -2.67
UBI4P0CG63 tM(CAU)Q2tM(CAU)Q2 78 nt-1.66□□□□□ -2.68
UBI4P0CG63 YMR172C-AYMR172C-A 384 nt-1.67□□□□□ -2.68
UBI4P0CG63 YGL041CYGL041C 204 nt-1.68□□□□□ -2.68
UBI4P0CG63 tY(GUA)QtY(GUA)Q 84 nt-1.68□□□□□ -2.68
UBI4P0CG63 YOR293C-AYOR293C-A 150 nt-1.7□□□□□ -2.68
UBI4P0CG63 YDR183C-AYDR183C-A 258 nt-1.71□□□□□ -2.68
UBI4P0CG63 PMP2YEL017C-A 132 nt-1.71□□□□□ -2.68
UBI4P0CG63 snR67snR67 82 nt-1.72□□□□□ -2.68
UBI4P0CG63 YGR146C-AYGR146C-A 162 nt-1.73□□□□□ -2.69
UBI4P0CG63 YOR381W-AYOR381W-A 168 nt-1.75□□□□□ -2.69
UBI4P0CG63 YAL016C-BYAL016C-B 186 nt-1.77□□□□□ -2.69
UBI4P0CG63 snR39BsnR39B 96 nt-1.77□□□□□ -2.69
UBI4P0CG63 CDC65tQ(CUG)M 72 nt-1.79□□□□□ -2.7
UBI4P0CG63 YBR182C-AYBR182C-A 195 nt-1.79□□□□□ -2.7
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms