Protein–RNA interactions for Protein: P05318

RPP1A, 60S acidic ribosomal protein P1-alpha, yeastyeast

Predicted RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPP1AP05318 SKI3YPR189W 4299 nt1.92□□□□□ -2.1
RPP1AP05318 FKS1YLR342W 5631 nt1.92□□□□□ -2.1
RPP1AP05318 CHS1YNL192W 3396 nt1.92□□□□□ -2.1
RPP1AP05318 tN(GUU)QtN(GUU)Q 71 nt1.91□□□□□ -2.1
RPP1AP05318 BRE1YDL074C 2103 nt1.9□□□□□ -2.1
RPP1AP05318 snR64snR64 101 nt1.9□□□□□ -2.11
RPP1AP05318 YHR214C-BYHR214C-B 5382 nt1.89□□□□□ -2.11
RPP1AP05318 ATG9YDL149W 2994 nt1.89□□□□□ -2.11
RPP1AP05318 CDC39YCR093W 6327 nt1.87□□□□□ -2.11
RPP1AP05318 NEO1YIL048W 3456 nt1.87□□□□□ -2.11
RPP1AP05318 APL3YBL037W 3078 nt1.87□□□□□ -2.11
RPP1AP05318 YBR200W-AYBR200W-A 165 nt1.86□□□□□ -2.11
RPP1AP05318 RPM2YML091C 3609 nt1.85□□□□□ -2.11
RPP1AP05318 SEC3YER008C 4011 nt1.84□□□□□ -2.11
RPP1AP05318 MSH3YCR092C 3057 nt1.83□□□□□ -2.12
RPP1AP05318 tW(CCA)G1tW(CCA)G1 72 nt1.82□□□□□ -2.12
RPP1AP05318 tW(CCA)G2tW(CCA)G2 72 nt1.82□□□□□ -2.12
RPP1AP05318 tW(CCA)JtW(CCA)J 72 nt1.82□□□□□ -2.12
RPP1AP05318 tW(CCA)KtW(CCA)K 72 nt1.82□□□□□ -2.12
RPP1AP05318 tW(CCA)MtW(CCA)M 72 nt1.82□□□□□ -2.12
RPP1AP05318 tW(CCA)PtW(CCA)P 72 nt1.82□□□□□ -2.12
RPP1AP05318 NUP188YML103C 4968 nt1.82□□□□□ -2.12
RPP1AP05318 YLR422WYLR422W 5799 nt1.82□□□□□ -2.12
RPP1AP05318 YCS4YLR272C 3531 nt1.81□□□□□ -2.12
RPP1AP05318 tD(GUC)QtD(GUC)Q 75 nt1.78□□□□□ -2.12
RPP1AP05318 YPL060C-AYPL060C-A 3315 nt1.77□□□□□ -2.13
RPP1AP05318 tT(UGU)HtT(UGU)H 72 nt1.77□□□□□ -2.13
RPP1AP05318 YPR160W-AYPR160W-A 81 nt1.77□□□□□ -2.13
RPP1AP05318 CFT1YDR301W 4074 nt1.77□□□□□ -2.13
RPP1AP05318 EST1YLR233C 2100 nt1.76□□□□□ -2.13
RPP1AP05318 SWI4YER111C 3282 nt1.76□□□□□ -2.13
RPP1AP05318 NUP170YBL079W 4509 nt1.75□□□□□ -2.13
RPP1AP05318 UTP22YGR090W 3714 nt1.75□□□□□ -2.13
RPP1AP05318 YKL225WYKL225W 348 nt1.75□□□□□ -2.13
RPP1AP05318 INO80YGL150C 4470 nt1.74□□□□□ -2.13
RPP1AP05318 ANS1YHR126C 480 nt1.74□□□□□ -2.13
RPP1AP05318 YMR247W-AYMR247W-A 144 nt1.74□□□□□ -2.13
RPP1AP05318 ULP2YIL031W 3105 nt1.73□□□□□ -2.13
RPP1AP05318 SEC8YPR055W 3198 nt1.73□□□□□ -2.13
RPP1AP05318 PET127YOR017W 2403 nt1.72□□□□□ -2.13
RPP1AP05318 PRP16YKR086W 3216 nt1.72□□□□□ -2.13
RPP1AP05318 TMA7YLR262C-A 195 nt1.71□□□□□ -2.14
RPP1AP05318 snR50snR50 90 nt1.71□□□□□ -2.14
RPP1AP05318 BUD3YCL014W 4911 nt1.71□□□□□ -2.14
RPP1AP05318 YNL054W-BYNL054W-B 5250 nt1.7□□□□□ -2.14
RPP1AP05318 YLR299C-AYLR299C-A 93 nt1.7□□□□□ -2.14
RPP1AP05318 BEM3YPL115C 3387 nt1.7□□□□□ -2.14
RPP1AP05318 YBR109W-AYBR109W-A 225 nt1.69□□□□□ -2.14
RPP1AP05318 snR38snR38 95 nt1.69□□□□□ -2.14
RPP1AP05318 snR69snR69 101 nt1.68□□□□□ -2.14
RPP1AP05318 SUP56tL(CAA)A 82 nt1.68□□□□□ -2.14
RPP1AP05318 SUP53tL(CAA)C 82 nt1.68□□□□□ -2.14
RPP1AP05318 tL(CAA)DtL(CAA)D 82 nt1.68□□□□□ -2.14
RPP1AP05318 tL(CAA)G1tL(CAA)G1 82 nt1.68□□□□□ -2.14
RPP1AP05318 SUP54tL(CAA)G2 82 nt1.68□□□□□ -2.14
RPP1AP05318 tL(CAA)G3tL(CAA)G3 82 nt1.68□□□□□ -2.14
RPP1AP05318 tL(CAA)KtL(CAA)K 82 nt1.68□□□□□ -2.14
RPP1AP05318 tL(CAA)LtL(CAA)L 82 nt1.68□□□□□ -2.14
RPP1AP05318 tL(CAA)MtL(CAA)M 82 nt1.68□□□□□ -2.14
RPP1AP05318 tL(CAA)NtL(CAA)N 82 nt1.68□□□□□ -2.14
RPP1AP05318 SLN1YIL147C 3663 nt1.67□□□□□ -2.14
RPP1AP05318 ROM2YLR371W 4071 nt1.66□□□□□ -2.14
RPP1AP05318 YDL159W-AYDL159W-A 132 nt1.66□□□□□ -2.14
RPP1AP05318 YLR399W-AYLR399W-A 105 nt1.66□□□□□ -2.14
RPP1AP05318 SEC31YDL195W 3822 nt1.65□□□□□ -2.14
RPP1AP05318 YDL159C-BYDL159C-B 177 nt1.65□□□□□ -2.15
RPP1AP05318 CSE1YGL238W 2883 nt1.65□□□□□ -2.15
RPP1AP05318 CCH1YGR217W 6120 nt1.65□□□□□ -2.15
RPP1AP05318 LAA1YJL207C 6045 nt1.64□□□□□ -2.15
RPP1AP05318 YLR149C-AYLR149C-A 87 nt1.63□□□□□ -2.15
RPP1AP05318 YSP1YHR155W 3687 nt1.62□□□□□ -2.15
RPP1AP05318 YML054C-AYML054C-A 159 nt1.62□□□□□ -2.15
RPP1AP05318 NUP145YGL092W 3954 nt1.62□□□□□ -2.15
RPP1AP05318 REV3YPL167C 4515 nt1.61□□□□□ -2.15
RPP1AP05318 DNA2YHR164C 4569 nt1.61□□□□□ -2.15
RPP1AP05318 AI1Q0050 2505 nt1.61□□□□□ -2.15
RPP1AP05318 MSN5YDR335W 3675 nt1.6□□□□□ -2.15
RPP1AP05318 BST1YFL025C 3090 nt1.6□□□□□ -2.15
RPP1AP05318 YNL284C-BYNL284C-B 5268 nt1.58□□□□□ -2.16
RPP1AP05318 NST1YNL091W 3723 nt1.56□□□□□ -2.16
RPP1AP05318 EST2YLR318W 2655 nt1.55□□□□□ -2.16
RPP1AP05318 RDS3YPR094W 324 nt1.55□□□□□ -2.16
RPP1AP05318 snR70snR70 164 nt1.54□□□□□ -2.16
RPP1AP05318 SXM1YDR395W 2835 nt1.53□□□□□ -2.16
RPP1AP05318 RPL41AYDL184C 78 nt1.52□□□□□ -2.17
RPP1AP05318 YOR093CYOR093C 4947 nt1.51□□□□□ -2.17
RPP1AP05318 YHR180C-BYHR180C-B 105 nt1.51□□□□□ -2.17
RPP1AP05318 NIP1YMR309C 2439 nt1.51□□□□□ -2.17
RPP1AP05318 FIG2YCR089W 4830 nt1.51□□□□□ -2.17
RPP1AP05318 PAU12YGR294W 363 nt1.5□□□□□ -2.17
RPP1AP05318 HUG1YML058W-A 207 nt1.49□□□□□ -2.17
RPP1AP05318 MBB1YJL199C 327 nt1.47□□□□□ -2.17
RPP1AP05318 YLL006W-AYLL006W-A 177 nt1.47□□□□□ -2.17
RPP1AP05318 YBR296C-AYBR296C-A 120 nt1.47□□□□□ -2.17
RPP1AP05318 RKR1YMR247C 4689 nt1.47□□□□□ -2.17
RPP1AP05318 CDC25YLR310C 4770 nt1.46□□□□□ -2.18
RPP1AP05318 SPT7YBR081C 3999 nt1.46□□□□□ -2.18
RPP1AP05318 YKL096C-BYKL096C-B 150 nt1.46□□□□□ -2.18
RPP1AP05318 YMR272W-BYMR272W-B 108 nt1.46□□□□□ -2.18
RPP1AP05318 DNF3YMR162C 4971 nt1.46□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms