Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 HLA-G-202ENST00000376815 851 ntBASIC20.01■□□□□ 0.79
LDB2O43679 HLA-G-203ENST00000376818 1127 ntBASIC20.01■□□□□ 0.79
LDB2O43679 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDB2O43679 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
LDB2O43679 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.01■□□□□ 0.79
LDB2O43679 AC142086.2-201ENST00000569753 217 ntBASIC20.01■□□□□ 0.79
LDB2O43679 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDB2O43679 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LDB2O43679 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.01■□□□□ 0.79
LDB2O43679 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDB2O43679 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.01■□□□□ 0.79
LDB2O43679 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20■□□□□ 0.79
LDB2O43679 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LDB2O43679 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20■□□□□ 0.79
LDB2O43679 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LDB2O43679 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LDB2O43679 AC073210.2-201ENST00000430369 194 ntBASIC20■□□□□ 0.79
LDB2O43679 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20■□□□□ 0.79
LDB2O43679 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20■□□□□ 0.79
LDB2O43679 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20■□□□□ 0.79
LDB2O43679 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20■□□□□ 0.79
LDB2O43679 KRT16P6-202ENST00000425692 1426 ntBASIC20■□□□□ 0.79
LDB2O43679 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20■□□□□ 0.79
LDB2O43679 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LDB2O43679 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LDB2O43679 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20■□□□□ 0.79
LDB2O43679 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LDB2O43679 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LDB2O43679 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LDB2O43679 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
LDB2O43679 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.99■□□□□ 0.79
LDB2O43679 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.99■□□□□ 0.79
LDB2O43679 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.99■□□□□ 0.79
LDB2O43679 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.99■□□□□ 0.79
LDB2O43679 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LDB2O43679 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LDB2O43679 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB2O43679 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.99■□□□□ 0.79
LDB2O43679 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.99■□□□□ 0.79
LDB2O43679 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.99■□□□□ 0.79
LDB2O43679 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
LDB2O43679 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.98■□□□□ 0.79
LDB2O43679 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB2O43679 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB2O43679 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LDB2O43679 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.98■□□□□ 0.79
LDB2O43679 AC097658.1-201ENST00000475555 843 ntBASIC19.98■□□□□ 0.79
LDB2O43679 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.98■□□□□ 0.79
LDB2O43679 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.98■□□□□ 0.79
LDB2O43679 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
LDB2O43679 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.98■□□□□ 0.79
LDB2O43679 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB2O43679 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB2O43679 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.98■□□□□ 0.79
LDB2O43679 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB2O43679 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LDB2O43679 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.97■□□□□ 0.79
LDB2O43679 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.97■□□□□ 0.79
LDB2O43679 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LDB2O43679 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LDB2O43679 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LDB2O43679 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LDB2O43679 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LDB2O43679 AL355802.2-201ENST00000402069 882 ntBASIC19.97■□□□□ 0.79
LDB2O43679 AC069152.1-201ENST00000438030 544 ntBASIC19.97■□□□□ 0.79
LDB2O43679 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.97■□□□□ 0.79
LDB2O43679 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.97■□□□□ 0.79
LDB2O43679 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
LDB2O43679 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.97■□□□□ 0.79
LDB2O43679 AC083880.1-201ENST00000608266 535 ntBASIC19.97■□□□□ 0.79
LDB2O43679 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LDB2O43679 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LDB2O43679 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.97■□□□□ 0.79
LDB2O43679 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LDB2O43679 AC125437.2-201ENST00000625180 2167 ntBASIC19.97■□□□□ 0.79
LDB2O43679 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LDB2O43679 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LDB2O43679 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LDB2O43679 TMEM179-206ENST00000616017 1645 ntBASIC19.96■□□□□ 0.79
LDB2O43679 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.96■□□□□ 0.79
LDB2O43679 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.96■□□□□ 0.79
LDB2O43679 AC133041.1-202ENST00000642053 222 ntBASIC19.96■□□□□ 0.79
LDB2O43679 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LDB2O43679 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LDB2O43679 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LDB2O43679 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LDB2O43679 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LDB2O43679 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LDB2O43679 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LDB2O43679 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms