Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 RPL37BYDR500C 267 nt2.25□□□□□ -2.05
PUF3Q07807 TOR1YJR066W 7413 nt2.25□□□□□ -2.05
PUF3Q07807 MET18YIL128W 3099 nt2.25□□□□□ -2.05
PUF3Q07807 BUD2YKL092C 3315 nt2.25□□□□□ -2.05
PUF3Q07807 TAH1YCR060W 336 nt2.24□□□□□ -2.05
PUF3Q07807 tM(CAU)Q2tM(CAU)Q2 78 nt2.24□□□□□ -2.05
PUF3Q07807 YMR175W-AYMR175W-A 195 nt2.24□□□□□ -2.05
PUF3Q07807 COG6YNL041C 2520 nt2.24□□□□□ -2.05
PUF3Q07807 SLI15YBR156C 2097 nt2.24□□□□□ -2.05
PUF3Q07807 YDL206WYDL206W 2289 nt2.24□□□□□ -2.05
PUF3Q07807 IST2YBR086C 2841 nt2.23□□□□□ -2.05
PUF3Q07807 DGR1YNL130C-A 147 nt2.23□□□□□ -2.05
PUF3Q07807 UFD2YDL190C 2886 nt2.23□□□□□ -2.05
PUF3Q07807 EAF1YDR359C 2949 nt2.22□□□□□ -2.05
PUF3Q07807 AGC1YPR021C 2709 nt2.22□□□□□ -2.05
PUF3Q07807 YBR072C-AYBR072C-A 162 nt2.22□□□□□ -2.05
PUF3Q07807 KOG1YHR186C 4674 nt2.21□□□□□ -2.06
PUF3Q07807 TRL1YJL087C 2484 nt2.2□□□□□ -2.06
PUF3Q07807 YOL083C-AYOL083C-A 141 nt2.2□□□□□ -2.06
PUF3Q07807 YOR161W-AYOR161W-A 81 nt2.2□□□□□ -2.06
PUF3Q07807 TUS1YLR425W 3924 nt2.19□□□□□ -2.06
PUF3Q07807 ADR1YDR216W 3972 nt2.19□□□□□ -2.06
PUF3Q07807 YNL266WYNL266W 420 nt2.19□□□□□ -2.06
PUF3Q07807 FKS1YLR342W 5631 nt2.19□□□□□ -2.06
PUF3Q07807 YOR343W-BYOR343W-B 5313 nt2.19□□□□□ -2.06
PUF3Q07807 BIR1YJR089W 2865 nt2.18□□□□□ -2.06
PUF3Q07807 KAP120YPL125W 3099 nt2.18□□□□□ -2.06
PUF3Q07807 YDR034C-AYDR034C-A 177 nt2.18□□□□□ -2.06
PUF3Q07807 YKL100W-AYKL100W-A 90 nt2.18□□□□□ -2.06
PUF3Q07807 STH1YIL126W 4080 nt2.17□□□□□ -2.06
PUF3Q07807 YJR039WYJR039W 3366 nt2.17□□□□□ -2.06
PUF3Q07807 CHC1YGL206C 4962 nt2.17□□□□□ -2.06
PUF3Q07807 CDC60YPL160W 3273 nt2.16□□□□□ -2.06
PUF3Q07807 SET3YKR029C 2256 nt2.16□□□□□ -2.06
PUF3Q07807 CTR9YOL145C 3234 nt2.16□□□□□ -2.06
PUF3Q07807 RTT101YJL047C 2529 nt2.16□□□□□ -2.06
PUF3Q07807 POL5YEL055C 3069 nt2.16□□□□□ -2.06
PUF3Q07807 UBP2YOR124C 3819 nt2.15□□□□□ -2.06
PUF3Q07807 YDR210WYDR210W 228 nt2.15□□□□□ -2.07
PUF3Q07807 COX5BYIL111W 456 nt2.15□□□□□ -2.07
PUF3Q07807 YBL071C-BYBL071C-B 99 nt2.15□□□□□ -2.07
PUF3Q07807 SPP41YDR464W 4308 nt2.15□□□□□ -2.07
PUF3Q07807 TBS1YBR150C 3285 nt2.15□□□□□ -2.07
PUF3Q07807 RTT107YHR154W 3213 nt2.15□□□□□ -2.07
PUF3Q07807 TOR2YKL203C 7425 nt2.14□□□□□ -2.07
PUF3Q07807 NUP157YER105C 4176 nt2.14□□□□□ -2.07
PUF3Q07807 YER172C-AYER172C-A 381 nt2.14□□□□□ -2.07
PUF3Q07807 YJL127W-AYJL127W-A 117 nt2.14□□□□□ -2.07
PUF3Q07807 SIR4YDR227W 4077 nt2.13□□□□□ -2.07
PUF3Q07807 RSM22YKL155C 1887 nt2.13□□□□□ -2.07 RIP-Chip
PUF3Q07807 SEC1YDR164C 2175 nt2.13□□□□□ -2.07
PUF3Q07807 NEO1YIL048W 3456 nt2.12□□□□□ -2.07
PUF3Q07807 FRK1YPL141C 2598 nt2.12□□□□□ -2.07
PUF3Q07807 SEC31YDL195W 3822 nt2.12□□□□□ -2.07
PUF3Q07807 HSL1YKL101W 4557 nt2.11□□□□□ -2.07
PUF3Q07807 GYP5YPL249C 2685 nt2.11□□□□□ -2.07
PUF3Q07807 RTP1YMR185W 2946 nt2.11□□□□□ -2.07
PUF3Q07807 SYH1YPL105C 2550 nt2.11□□□□□ -2.07
PUF3Q07807 FAB1YFR019W 6837 nt2.11□□□□□ -2.07
PUF3Q07807 IRE1YHR079C 3348 nt2.11□□□□□ -2.07
PUF3Q07807 USO1YDL058W 5373 nt2.1□□□□□ -2.07
PUF3Q07807 COA6YMR244C-A 315 nt2.1□□□□□ -2.07
PUF3Q07807 PET309YLR067C 2898 nt2.08□□□□□ -2.08 RIP-Chip
PUF3Q07807 SEY1YOR165W 2331 nt2.07□□□□□ -2.08
PUF3Q07807 TRM3YDL112W 4311 nt2.07□□□□□ -2.08
PUF3Q07807 YDR371C-AYDR371C-A 105 nt2.07□□□□□ -2.08
PUF3Q07807 YML002WYML002W 2214 nt2.07□□□□□ -2.08
PUF3Q07807 YBL100W-CYBL100W-C 120 nt2.06□□□□□ -2.08
PUF3Q07807 SEC21YNL287W 2808 nt2.06□□□□□ -2.08
PUF3Q07807 GCN2YDR283C 4980 nt2.06□□□□□ -2.08
PUF3Q07807 HIR3YJR140C 4947 nt2.05□□□□□ -2.08 RIP-Chip
PUF3Q07807 YGR146C-AYGR146C-A 162 nt2.05□□□□□ -2.08
PUF3Q07807 YLR232WYLR232W 348 nt2.05□□□□□ -2.08
PUF3Q07807 SPO24YPR036W-A 204 nt2.05□□□□□ -2.08
PUF3Q07807 HER1YOR227W 3741 nt2.05□□□□□ -2.08
PUF3Q07807 YOL164W-AYOL164W-A 183 nt2.04□□□□□ -2.08
PUF3Q07807 RPS26AYGL189C 360 nt2.03□□□□□ -2.08
PUF3Q07807 YGR240C-AYGR240C-A 201 nt2.03□□□□□ -2.08
PUF3Q07807 snR53snR53 91 nt2.03□□□□□ -2.08
PUF3Q07807 SFB2YNL049C 2631 nt2.02□□□□□ -2.09
PUF3Q07807 YLR041WYLR041W 321 nt2□□□□□ -2.09
PUF3Q07807 FYV10YIL097W 1551 nt2□□□□□ -2.09
PUF3Q07807 ALY2YJL084C 3141 nt2□□□□□ -2.09
PUF3Q07807 NUT1YGL151W 3399 nt1.99□□□□□ -2.09
PUF3Q07807 YBR196C-AYBR196C-A 150 nt1.99□□□□□ -2.09
PUF3Q07807 ATG9YDL149W 2994 nt1.99□□□□□ -2.09
PUF3Q07807 PAN2YGL094C 3348 nt1.98□□□□□ -2.09
PUF3Q07807 SAC3YDR159W 3906 nt1.98□□□□□ -2.09
PUF3Q07807 SMC1YFL008W 3678 nt1.96□□□□□ -2.1
PUF3Q07807 TMA7YLR262C-A 195 nt1.96□□□□□ -2.1
PUF3Q07807 MGA2YIR033W 3342 nt1.95□□□□□ -2.1
PUF3Q07807 PEP1YBL017C 4740 nt1.95□□□□□ -2.1
PUF3Q07807 YHR214C-BYHR214C-B 5382 nt1.95□□□□□ -2.1
PUF3Q07807 UTP21YLR409C 2820 nt1.95□□□□□ -2.1
PUF3Q07807 MMS4YBR098W 2076 nt1.95□□□□□ -2.1
PUF3Q07807 GLG1YKR058W 1851 nt1.94□□□□□ -2.1
PUF3Q07807 YAR009CYAR009C 3591 nt1.94□□□□□ -2.1
PUF3Q07807 MYO4YAL029C 4416 nt1.94□□□□□ -2.1 RIP-Chip
PUF3Q07807 YMR045CYMR045C 5268 nt1.94□□□□□ -2.1
PUF3Q07807 MYO2YOR326W 4725 nt1.94□□□□□ -2.1 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 41.1 ms