Protein–RNA interactions for Protein: Q04839

GFD1, mRNA transport factor GFD1, yeastyeast

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GFD1Q04839 EMC5YIL027C 426 nt1.63□□□□□ -2.15
GFD1Q04839 YBL053WYBL053W 375 nt1.63□□□□□ -2.15
GFD1Q04839 snR14snR14 160 nt1.63□□□□□ -2.15
GFD1Q04839 YOR381W-AYOR381W-A 168 nt1.63□□□□□ -2.15
GFD1Q04839 SKI3YPR189W 4299 nt1.62□□□□□ -2.15
GFD1Q04839 SAC3YDR159W 3906 nt1.62□□□□□ -2.15
GFD1Q04839 RAD50YNL250W 3939 nt1.62□□□□□ -2.15
GFD1Q04839 YJL022WYJL022W 309 nt1.61□□□□□ -2.15
GFD1Q04839 YOR170WYOR170W 306 nt1.61□□□□□ -2.15
GFD1Q04839 FIG2YCR089W 4830 nt1.61□□□□□ -2.15
GFD1Q04839 PMD1YER132C 5262 nt1.6□□□□□ -2.15
GFD1Q04839 YNL170WYNL170W 396 nt1.6□□□□□ -2.15
GFD1Q04839 RPS30BYOR182C 192 nt1.6□□□□□ -2.15
GFD1Q04839 ALY2YJL084C 3141 nt1.6□□□□□ -2.15
GFD1Q04839 SMC4YLR086W 4257 nt1.6□□□□□ -2.15
GFD1Q04839 YDL206WYDL206W 2289 nt1.6□□□□□ -2.15
GFD1Q04839 POL5YEL055C 3069 nt1.6□□□□□ -2.15
GFD1Q04839 NUP192YJL039C 5052 nt1.6□□□□□ -2.15
GFD1Q04839 tQ(UUG)E2tQ(UUG)E2 72 nt1.59□□□□□ -2.15
GFD1Q04839 COX12YLR038C 252 nt1.59□□□□□ -2.15
GFD1Q04839 YOR161W-BYOR161W-B 261 nt1.59□□□□□ -2.15
GFD1Q04839 ADR1YDR216W 3972 nt1.59□□□□□ -2.16
GFD1Q04839 PAA1YDR071C 576 nt1.58□□□□□ -2.16
GFD1Q04839 UFD2YDL190C 2886 nt1.58□□□□□ -2.16
GFD1Q04839 KAP122YGL016W 3246 nt1.58□□□□□ -2.16
GFD1Q04839 SLX4YLR135W 2247 nt1.58□□□□□ -2.16
GFD1Q04839 YEL073CYEL073C 324 nt1.57□□□□□ -2.16
GFD1Q04839 NUP157YER105C 4176 nt1.56□□□□□ -2.16
GFD1Q04839 YPL044CYPL044C 549 nt1.56□□□□□ -2.16
GFD1Q04839 YOR019WYOR019W 2193 nt1.56□□□□□ -2.16
GFD1Q04839 SDH6YDR379C-A 240 nt1.55□□□□□ -2.16
GFD1Q04839 CDC31YOR257W 486 nt1.54□□□□□ -2.16
GFD1Q04839 SPC110YDR356W 2835 nt1.54□□□□□ -2.16
GFD1Q04839 YCR038W-AYCR038W-A 126 nt1.53□□□□□ -2.16
GFD1Q04839 PRP42YDR235W 1635 nt1.53□□□□□ -2.16
GFD1Q04839 CHS1YNL192W 3396 nt1.52□□□□□ -2.17
GFD1Q04839 PAN2YGL094C 3348 nt1.52□□□□□ -2.17
GFD1Q04839 YGR164WYGR164W 336 nt1.52□□□□□ -2.17
GFD1Q04839 YAR009CYAR009C 3591 nt1.52□□□□□ -2.17
GFD1Q04839 PET127YOR017W 2403 nt1.51□□□□□ -2.17
GFD1Q04839 YCS4YLR272C 3531 nt1.51□□□□□ -2.17
GFD1Q04839 YAL067W-AYAL067W-A 228 nt1.51□□□□□ -2.17
GFD1Q04839 YNL211CYNL211C 261 nt1.51□□□□□ -2.17
GFD1Q04839 TTI1YKL033W 3117 nt1.5□□□□□ -2.17
GFD1Q04839 MSH3YCR092C 3057 nt1.5□□□□□ -2.17
GFD1Q04839 SSK2YNR031C 4740 nt1.5□□□□□ -2.17
GFD1Q04839 APL1YJR005W 2103 nt1.49□□□□□ -2.17
GFD1Q04839 MMS4YBR098W 2076 nt1.49□□□□□ -2.17
GFD1Q04839 CDC25YLR310C 4770 nt1.48□□□□□ -2.17
GFD1Q04839 SET3YKR029C 2256 nt1.48□□□□□ -2.17
GFD1Q04839 SXM1YDR395W 2835 nt1.48□□□□□ -2.17
GFD1Q04839 YIL002W-AYIL002W-A 210 nt1.47□□□□□ -2.17
GFD1Q04839 YBR221W-AYBR221W-A 105 nt1.46□□□□□ -2.18
GFD1Q04839 STO1YMR125W 2586 nt1.46□□□□□ -2.18
GFD1Q04839 CDC39YCR093W 6327 nt1.45□□□□□ -2.18
GFD1Q04839 YER053C-AYER053C-A 114 nt1.45□□□□□ -2.18
GFD1Q04839 YOR161W-AYOR161W-A 81 nt1.45□□□□□ -2.18
GFD1Q04839 FYV8YGR196C 2454 nt1.45□□□□□ -2.18
GFD1Q04839 LAA1YJL207C 6045 nt1.45□□□□□ -2.18
GFD1Q04839 APL3YBL037W 3078 nt1.45□□□□□ -2.18
GFD1Q04839 NUP188YML103C 4968 nt1.45□□□□□ -2.18
GFD1Q04839 ASE1YOR058C 2658 nt1.44□□□□□ -2.18
GFD1Q04839 HKR1YDR420W 5409 nt1.43□□□□□ -2.18
GFD1Q04839 YFR012W-AYFR012W-A 87 nt1.43□□□□□ -2.18
GFD1Q04839 YLL054CYLL054C 2532 nt1.43□□□□□ -2.18
GFD1Q04839 tH(GUG)E1tH(GUG)E1 72 nt1.41□□□□□ -2.18
GFD1Q04839 tH(GUG)E2tH(GUG)E2 72 nt1.41□□□□□ -2.18
GFD1Q04839 tH(GUG)G1tH(GUG)G1 72 nt1.41□□□□□ -2.18
GFD1Q04839 tH(GUG)G2tH(GUG)G2 72 nt1.41□□□□□ -2.18
GFD1Q04839 tH(GUG)HtH(GUG)H 72 nt1.41□□□□□ -2.18
GFD1Q04839 tH(GUG)KtH(GUG)K 72 nt1.41□□□□□ -2.18
GFD1Q04839 tH(GUG)MtH(GUG)M 72 nt1.41□□□□□ -2.18
GFD1Q04839 YGL123C-AYGL123C-A 231 nt1.41□□□□□ -2.18
GFD1Q04839 YIL020C-AYIL020C-A 339 nt1.41□□□□□ -2.18
GFD1Q04839 SWI4YER111C 3282 nt1.41□□□□□ -2.18
GFD1Q04839 YLR422WYLR422W 5799 nt1.41□□□□□ -2.18
GFD1Q04839 EAF1YDR359C 2949 nt1.41□□□□□ -2.18
GFD1Q04839 CMC4YMR194C-B 222 nt1.4□□□□□ -2.19
GFD1Q04839 PIK1YNL267W 3201 nt1.4□□□□□ -2.19
GFD1Q04839 SEC21YNL287W 2808 nt1.39□□□□□ -2.19
GFD1Q04839 BST1YFL025C 3090 nt1.39□□□□□ -2.19
GFD1Q04839 Q0143Q0143 153 nt1.39□□□□□ -2.19
GFD1Q04839 YOR102WYOR102W 351 nt1.38□□□□□ -2.19
GFD1Q04839 BFR2YDR299W 1605 nt1.37□□□□□ -2.19
GFD1Q04839 NOP9YJL010C 2001 nt1.37□□□□□ -2.19
GFD1Q04839 PRP5YBR237W 2550 nt1.37□□□□□ -2.19
GFD1Q04839 tL(UAA)QtL(UAA)Q 85 nt1.37□□□□□ -2.19
GFD1Q04839 GEA2YEL022W 4380 nt1.36□□□□□ -2.19
GFD1Q04839 YHL015W-AYHL015W-A 84 nt1.36□□□□□ -2.19
GFD1Q04839 RSM22YKL155C 1887 nt1.36□□□□□ -2.19
GFD1Q04839 snR48snR48 113 nt1.36□□□□□ -2.19
GFD1Q04839 WAR1YML076C 2835 nt1.36□□□□□ -2.19
GFD1Q04839 STB6YKL072W 2301 nt1.35□□□□□ -2.19
GFD1Q04839 SEC3YER008C 4011 nt1.35□□□□□ -2.19
GFD1Q04839 SNU13YEL026W 381 nt1.35□□□□□ -2.19
GFD1Q04839 COX5BYIL111W 456 nt1.35□□□□□ -2.19
GFD1Q04839 YLR282CYLR282C 342 nt1.35□□□□□ -2.19
GFD1Q04839 EST2YLR318W 2655 nt1.34□□□□□ -2.2
GFD1Q04839 YGL182CYGL182C 324 nt1.32□□□□□ -2.2
GFD1Q04839 YLR041WYLR041W 321 nt1.32□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 58 ms