Protein–RNA interactions for Protein: Q04172

SHE9, Sensitive to high expression protein 9, mitochondrial, yeastyeast

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE9Q04172 YLL054CYLL054C 2532 nt1.92□□□□□ -2.1
SHE9Q04172 DNF3YMR162C 4971 nt1.92□□□□□ -2.1
SHE9Q04172 RTP1YMR185W 2946 nt1.92□□□□□ -2.1
SHE9Q04172 IRC20YLR247C 4671 nt1.91□□□□□ -2.1
SHE9Q04172 COX12YLR038C 252 nt1.91□□□□□ -2.1
SHE9Q04172 KCS1YDR017C 3153 nt1.9□□□□□ -2.11
SHE9Q04172 PAN2YGL094C 3348 nt1.89□□□□□ -2.11
SHE9Q04172 YCR038W-AYCR038W-A 126 nt1.89□□□□□ -2.11
SHE9Q04172 TTI1YKL033W 3117 nt1.88□□□□□ -2.11
SHE9Q04172 SDH6YDR379C-A 240 nt1.88□□□□□ -2.11
SHE9Q04172 YGR164WYGR164W 336 nt1.88□□□□□ -2.11
SHE9Q04172 YPL044CYPL044C 549 nt1.88□□□□□ -2.11
SHE9Q04172 YOR093CYOR093C 4947 nt1.88□□□□□ -2.11
SHE9Q04172 GYP5YPL249C 2685 nt1.87□□□□□ -2.11
SHE9Q04172 YAR009CYAR009C 3591 nt1.87□□□□□ -2.11
SHE9Q04172 COA6YMR244C-A 315 nt1.87□□□□□ -2.11
SHE9Q04172 YNL211CYNL211C 261 nt1.87□□□□□ -2.11
SHE9Q04172 SMC1YFL008W 3678 nt1.86□□□□□ -2.11
SHE9Q04172 YAL067W-AYAL067W-A 228 nt1.86□□□□□ -2.11
SHE9Q04172 YBR221W-AYBR221W-A 105 nt1.86□□□□□ -2.11
SHE9Q04172 PRP42YDR235W 1635 nt1.85□□□□□ -2.11
SHE9Q04172 PEP1YBL017C 4740 nt1.84□□□□□ -2.11
SHE9Q04172 tT(UGU)HtT(UGU)H 72 nt1.84□□□□□ -2.11
SHE9Q04172 YBL053WYBL053W 375 nt1.84□□□□□ -2.11
SHE9Q04172 PKH3YDR466W 2697 nt1.84□□□□□ -2.11
SHE9Q04172 VPS15YBR097W 4365 nt1.83□□□□□ -2.12
SHE9Q04172 POL5YEL055C 3069 nt1.82□□□□□ -2.12
SHE9Q04172 YIL002W-AYIL002W-A 210 nt1.82□□□□□ -2.12
SHE9Q04172 KAP122YGL016W 3246 nt1.82□□□□□ -2.12
SHE9Q04172 RSM22YKL155C 1887 nt1.82□□□□□ -2.12
SHE9Q04172 YMR247W-AYMR247W-A 144 nt1.81□□□□□ -2.12
SHE9Q04172 STO1YMR125W 2586 nt1.81□□□□□ -2.12
SHE9Q04172 PMD1YER132C 5262 nt1.81□□□□□ -2.12
SHE9Q04172 YMR272W-BYMR272W-B 108 nt1.8□□□□□ -2.12
SHE9Q04172 SET3YKR029C 2256 nt1.8□□□□□ -2.12
SHE9Q04172 SNU13YEL026W 381 nt1.78□□□□□ -2.12
SHE9Q04172 YGL123C-AYGL123C-A 231 nt1.78□□□□□ -2.12
SHE9Q04172 BST1YFL025C 3090 nt1.78□□□□□ -2.12
SHE9Q04172 YCS4YLR272C 3531 nt1.78□□□□□ -2.13
SHE9Q04172 YHL015W-AYHL015W-A 84 nt1.77□□□□□ -2.13
SHE9Q04172 PRP5YBR237W 2550 nt1.77□□□□□ -2.13
SHE9Q04172 YER053C-AYER053C-A 114 nt1.76□□□□□ -2.13
SHE9Q04172 YOR019WYOR019W 2193 nt1.76□□□□□ -2.13
SHE9Q04172 YOR102WYOR102W 351 nt1.75□□□□□ -2.13
SHE9Q04172 WAR1YML076C 2835 nt1.75□□□□□ -2.13
SHE9Q04172 CMC4YMR194C-B 222 nt1.74□□□□□ -2.13
SHE9Q04172 EAF1YDR359C 2949 nt1.74□□□□□ -2.13
SHE9Q04172 SWI4YER111C 3282 nt1.74□□□□□ -2.13
SHE9Q04172 YLR422WYLR422W 5799 nt1.74□□□□□ -2.13
SHE9Q04172 YOR161W-AYOR161W-A 81 nt1.73□□□□□ -2.13
SHE9Q04172 YKL100W-AYKL100W-A 90 nt1.72□□□□□ -2.13
SHE9Q04172 APL3YBL037W 3078 nt1.72□□□□□ -2.13
SHE9Q04172 CFT1YDR301W 4074 nt1.71□□□□□ -2.14
SHE9Q04172 GEA2YEL022W 4380 nt1.71□□□□□ -2.14
SHE9Q04172 NOP9YJL010C 2001 nt1.71□□□□□ -2.14
SHE9Q04172 UTP8YGR128C 2142 nt1.7□□□□□ -2.14
SHE9Q04172 COX5BYIL111W 456 nt1.7□□□□□ -2.14
SHE9Q04172 TRM732YMR259C 4263 nt1.7□□□□□ -2.14
SHE9Q04172 AZF1YOR113W 2745 nt1.7□□□□□ -2.14
SHE9Q04172 NUP188YML103C 4968 nt1.69□□□□□ -2.14
SHE9Q04172 YIL020C-AYIL020C-A 339 nt1.69□□□□□ -2.14
SHE9Q04172 YLR282CYLR282C 342 nt1.69□□□□□ -2.14
SHE9Q04172 YBR200W-AYBR200W-A 165 nt1.69□□□□□ -2.14
SHE9Q04172 BFR2YDR299W 1605 nt1.69□□□□□ -2.14
SHE9Q04172 MEC1YBR136W 7107 nt1.68□□□□□ -2.14
SHE9Q04172 NUP145YGL092W 3954 nt1.67□□□□□ -2.14
SHE9Q04172 YOR314W-AYOR314W-A 111 nt1.67□□□□□ -2.14
SHE9Q04172 snR48snR48 113 nt1.67□□□□□ -2.14
SHE9Q04172 SXM1YDR395W 2835 nt1.67□□□□□ -2.14
SHE9Q04172 EST2YLR318W 2655 nt1.67□□□□□ -2.14
SHE9Q04172 NUP157YER105C 4176 nt1.65□□□□□ -2.15
SHE9Q04172 YFR012W-AYFR012W-A 87 nt1.64□□□□□ -2.15
SHE9Q04172 YGL182CYGL182C 324 nt1.64□□□□□ -2.15
SHE9Q04172 Q0143Q0143 153 nt1.64□□□□□ -2.15
SHE9Q04172 YLL020CYLL020C 306 nt1.64□□□□□ -2.15
SHE9Q04172 YML002WYML002W 2214 nt1.64□□□□□ -2.15
SHE9Q04172 RPL26BYGR034W 384 nt1.63□□□□□ -2.15
SHE9Q04172 CDC31YOR257W 486 nt1.63□□□□□ -2.15
SHE9Q04172 IRA1YBR140C 9279 nt1.62□□□□□ -2.15
SHE9Q04172 SAC3YDR159W 3906 nt1.61□□□□□ -2.15
SHE9Q04172 tL(UAA)QtL(UAA)Q 85 nt1.6□□□□□ -2.15
SHE9Q04172 snR190snR190 190 nt1.6□□□□□ -2.15
SHE9Q04172 YBL039C-AYBL039C-A 84 nt1.59□□□□□ -2.15
SHE9Q04172 SEC21YNL287W 2808 nt1.58□□□□□ -2.16
SHE9Q04172 CHS6YJL099W 2241 nt1.58□□□□□ -2.16
SHE9Q04172 SEC3YER008C 4011 nt1.57□□□□□ -2.16
SHE9Q04172 FYV10YIL097W 1551 nt1.57□□□□□ -2.16
SHE9Q04172 ASE1YOR058C 2658 nt1.57□□□□□ -2.16
SHE9Q04172 CDC39YCR093W 6327 nt1.57□□□□□ -2.16
SHE9Q04172 SPC110YDR356W 2835 nt1.56□□□□□ -2.16
SHE9Q04172 NUP192YJL039C 5052 nt1.56□□□□□ -2.16
SHE9Q04172 TAH1YCR060W 336 nt1.56□□□□□ -2.16
SHE9Q04172 YLR041WYLR041W 321 nt1.56□□□□□ -2.16
SHE9Q04172 tQ(UUG)E2tQ(UUG)E2 72 nt1.55□□□□□ -2.16
SHE9Q04172 CCH1YGR217W 6120 nt1.55□□□□□ -2.16
SHE9Q04172 STB6YKL072W 2301 nt1.55□□□□□ -2.16
SHE9Q04172 SSK2YNR031C 4740 nt1.54□□□□□ -2.16
SHE9Q04172 MSN5YDR335W 3675 nt1.54□□□□□ -2.16
SHE9Q04172 YCL001W-BYCL001W-B 255 nt1.53□□□□□ -2.16
SHE9Q04172 CHS1YNL192W 3396 nt1.53□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 116.5 ms