Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 RAD50YNL250W 3939 nt1.74□□□□□ -2.13
CTK1Q03957 TTI1YKL033W 3117 nt1.73□□□□□ -2.13
CTK1Q03957 APL1YJR005W 2103 nt1.73□□□□□ -2.13
CTK1Q03957 MYO2YOR326W 4725 nt1.73□□□□□ -2.13
CTK1Q03957 snR85snR85 171 nt1.72□□□□□ -2.13
CTK1Q03957 TMA7YLR262C-A 195 nt1.72□□□□□ -2.13
CTK1Q03957 CTF4YPR135W 2784 nt1.72□□□□□ -2.13
CTK1Q03957 SKI3YPR189W 4299 nt1.72□□□□□ -2.13
CTK1Q03957 RTP1YMR185W 2946 nt1.71□□□□□ -2.14
CTK1Q03957 LHS1YKL073W 2646 nt1.71□□□□□ -2.14
CTK1Q03957 PAN2YGL094C 3348 nt1.7□□□□□ -2.14
CTK1Q03957 FAB1YFR019W 6837 nt1.7□□□□□ -2.14
CTK1Q03957 YIL002W-AYIL002W-A 210 nt1.7□□□□□ -2.14
CTK1Q03957 YAL067W-AYAL067W-A 228 nt1.7□□□□□ -2.14
CTK1Q03957 KIP1YBL063W 3336 nt1.7□□□□□ -2.14
CTK1Q03957 UFD2YDL190C 2886 nt1.7□□□□□ -2.14
CTK1Q03957 MON2YNL297C 4911 nt1.69□□□□□ -2.14
CTK1Q03957 YOR102WYOR102W 351 nt1.69□□□□□ -2.14
CTK1Q03957 snR14snR14 160 nt1.69□□□□□ -2.14
CTK1Q03957 SLX4YLR135W 2247 nt1.68□□□□□ -2.14
CTK1Q03957 YHL015W-AYHL015W-A 84 nt1.68□□□□□ -2.14
CTK1Q03957 YJL022WYJL022W 309 nt1.68□□□□□ -2.14
CTK1Q03957 YCS4YLR272C 3531 nt1.68□□□□□ -2.14
CTK1Q03957 SMC4YLR086W 4257 nt1.67□□□□□ -2.14
CTK1Q03957 COA6YMR244C-A 315 nt1.67□□□□□ -2.14
CTK1Q03957 MMS4YBR098W 2076 nt1.67□□□□□ -2.14
CTK1Q03957 YNL211CYNL211C 261 nt1.66□□□□□ -2.14
CTK1Q03957 IRC20YLR247C 4671 nt1.66□□□□□ -2.14
CTK1Q03957 YAR009CYAR009C 3591 nt1.65□□□□□ -2.14
CTK1Q03957 CDC31YOR257W 486 nt1.65□□□□□ -2.15
CTK1Q03957 KAP122YGL016W 3246 nt1.64□□□□□ -2.15
CTK1Q03957 YFR012W-AYFR012W-A 87 nt1.64□□□□□ -2.15
CTK1Q03957 ANS1YHR126C 480 nt1.64□□□□□ -2.15
CTK1Q03957 REV3YPL167C 4515 nt1.64□□□□□ -2.15
CTK1Q03957 CFT1YDR301W 4074 nt1.63□□□□□ -2.15
CTK1Q03957 YER053C-AYER053C-A 114 nt1.63□□□□□ -2.15
CTK1Q03957 tT(UGU)HtT(UGU)H 72 nt1.63□□□□□ -2.15
CTK1Q03957 PRP5YBR237W 2550 nt1.63□□□□□ -2.15
CTK1Q03957 TRM732YMR259C 4263 nt1.62□□□□□ -2.15
CTK1Q03957 YLL054CYLL054C 2532 nt1.62□□□□□ -2.15
CTK1Q03957 YOR314W-AYOR314W-A 111 nt1.62□□□□□ -2.15
CTK1Q03957 tL(UAA)QtL(UAA)Q 85 nt1.61□□□□□ -2.15
CTK1Q03957 YGL123C-AYGL123C-A 231 nt1.61□□□□□ -2.15
CTK1Q03957 YMR247W-AYMR247W-A 144 nt1.61□□□□□ -2.15
CTK1Q03957 YOR161W-AYOR161W-A 81 nt1.59□□□□□ -2.15
CTK1Q03957 YCL001W-BYCL001W-B 255 nt1.59□□□□□ -2.15
CTK1Q03957 YLR422WYLR422W 5799 nt1.59□□□□□ -2.15
CTK1Q03957 RSM22YKL155C 1887 nt1.58□□□□□ -2.16
CTK1Q03957 SET3YKR029C 2256 nt1.58□□□□□ -2.16
CTK1Q03957 BFR2YDR299W 1605 nt1.58□□□□□ -2.16
CTK1Q03957 VPS15YBR097W 4365 nt1.57□□□□□ -2.16
CTK1Q03957 YOR019WYOR019W 2193 nt1.57□□□□□ -2.16
CTK1Q03957 NUP157YER105C 4176 nt1.56□□□□□ -2.16
CTK1Q03957 EAF1YDR359C 2949 nt1.56□□□□□ -2.16
CTK1Q03957 STO1YMR125W 2586 nt1.56□□□□□ -2.16
CTK1Q03957 PMD1YER132C 5262 nt1.56□□□□□ -2.16
CTK1Q03957 YGL182CYGL182C 324 nt1.55□□□□□ -2.16
CTK1Q03957 COX5BYIL111W 456 nt1.55□□□□□ -2.16
CTK1Q03957 CMC4YMR194C-B 222 nt1.55□□□□□ -2.16
CTK1Q03957 PKH3YDR466W 2697 nt1.55□□□□□ -2.16
CTK1Q03957 MEC1YBR136W 7107 nt1.55□□□□□ -2.16
CTK1Q03957 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
CTK1Q03957 STB6YKL072W 2301 nt1.53□□□□□ -2.16
CTK1Q03957 YLL020CYLL020C 306 nt1.53□□□□□ -2.16
CTK1Q03957 YLR282CYLR282C 342 nt1.53□□□□□ -2.16
CTK1Q03957 APL3YBL037W 3078 nt1.53□□□□□ -2.17
CTK1Q03957 BRR2YER172C 6492 nt1.52□□□□□ -2.17
CTK1Q03957 NOP9YJL010C 2001 nt1.52□□□□□ -2.17
CTK1Q03957 YKL100W-AYKL100W-A 90 nt1.52□□□□□ -2.17
CTK1Q03957 YBL039C-AYBL039C-A 84 nt1.52□□□□□ -2.17
CTK1Q03957 SWI4YER111C 3282 nt1.52□□□□□ -2.17
CTK1Q03957 YOR329W-AYOR329W-A 210 nt1.51□□□□□ -2.17
CTK1Q03957 UTP8YGR128C 2142 nt1.51□□□□□ -2.17
CTK1Q03957 SMC1YFL008W 3678 nt1.5□□□□□ -2.17
CTK1Q03957 YOR093CYOR093C 4947 nt1.5□□□□□ -2.17
CTK1Q03957 ASE1YOR058C 2658 nt1.5□□□□□ -2.17
CTK1Q03957 CHS6YJL099W 2241 nt1.5□□□□□ -2.17
CTK1Q03957 WAR1YML076C 2835 nt1.5□□□□□ -2.17
CTK1Q03957 DNF3YMR162C 4971 nt1.49□□□□□ -2.17
CTK1Q03957 YLR041WYLR041W 321 nt1.49□□□□□ -2.17
CTK1Q03957 BST1YFL025C 3090 nt1.49□□□□□ -2.17
CTK1Q03957 NUP192YJL039C 5052 nt1.48□□□□□ -2.17
CTK1Q03957 YIL071W-AYIL071W-A 477 nt1.48□□□□□ -2.17
CTK1Q03957 CAT8YMR280C 4302 nt1.47□□□□□ -2.17
CTK1Q03957 NUP188YML103C 4968 nt1.47□□□□□ -2.17
CTK1Q03957 YML002WYML002W 2214 nt1.47□□□□□ -2.17
CTK1Q03957 SEC3YER008C 4011 nt1.47□□□□□ -2.17
CTK1Q03957 TAH1YCR060W 336 nt1.45□□□□□ -2.18
CTK1Q03957 OST4YDL232W 111 nt1.45□□□□□ -2.18
CTK1Q03957 CDC39YCR093W 6327 nt1.44□□□□□ -2.18
CTK1Q03957 snR190snR190 190 nt1.44□□□□□ -2.18
CTK1Q03957 GEA2YEL022W 4380 nt1.44□□□□□ -2.18
CTK1Q03957 NUP145YGL092W 3954 nt1.44□□□□□ -2.18
CTK1Q03957 YBR200W-AYBR200W-A 165 nt1.43□□□□□ -2.18
CTK1Q03957 EST2YLR318W 2655 nt1.43□□□□□ -2.18
CTK1Q03957 RPL26BYGR034W 384 nt1.42□□□□□ -2.18
CTK1Q03957 CCH1YGR217W 6120 nt1.42□□□□□ -2.18
CTK1Q03957 SSK2YNR031C 4740 nt1.42□□□□□ -2.18
CTK1Q03957 FYV10YIL097W 1551 nt1.42□□□□□ -2.18
CTK1Q03957 SEC21YNL287W 2808 nt1.41□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 101.7 ms