Protein–RNA interactions for Protein: P48567

PUS4, tRNA pseudouridine synthase 4, yeastyeast

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUS4P48567 CHS1YNL192W 3396 nt1.39□□□□□ -2.19
PUS4P48567 POL5YEL055C 3069 nt1.39□□□□□ -2.19
PUS4P48567 YDL196WYDL196W 330 nt1.39□□□□□ -2.19
PUS4P48567 ISD11YER048W-A 285 nt1.39□□□□□ -2.19
PUS4P48567 ULI1YFR026C 510 nt1.39□□□□□ -2.19
PUS4P48567 tM(CAU)Q1tM(CAU)Q1 76 nt1.38□□□□□ -2.19
PUS4P48567 YNL211CYNL211C 261 nt1.38□□□□□ -2.19
PUS4P48567 YBR131C-AYBR131C-A 90 nt1.38□□□□□ -2.19
PUS4P48567 YNL284C-BYNL284C-B 5268 nt1.38□□□□□ -2.19
PUS4P48567 SEC21YNL287W 2808 nt1.38□□□□□ -2.19
PUS4P48567 APL1YJR005W 2103 nt1.37□□□□□ -2.19
PUS4P48567 YDR406W-AYDR406W-A 246 nt1.37□□□□□ -2.19
PUS4P48567 YMR046W-AYMR046W-A 129 nt1.37□□□□□ -2.19
PUS4P48567 NUP192YJL039C 5052 nt1.37□□□□□ -2.19
PUS4P48567 TRM732YMR259C 4263 nt1.37□□□□□ -2.19
PUS4P48567 RSM22YKL155C 1887 nt1.36□□□□□ -2.19
PUS4P48567 YOR345CYOR345C 351 nt1.36□□□□□ -2.19
PUS4P48567 FYV8YGR196C 2454 nt1.35□□□□□ -2.19
PUS4P48567 PET127YOR017W 2403 nt1.35□□□□□ -2.19
PUS4P48567 YEL014CYEL014C 306 nt1.35□□□□□ -2.19
PUS4P48567 TRM3YDL112W 4311 nt1.34□□□□□ -2.19
PUS4P48567 CMC4YMR194C-B 222 nt1.34□□□□□ -2.19
PUS4P48567 SEC3YER008C 4011 nt1.33□□□□□ -2.2
PUS4P48567 BUD3YCL014W 4911 nt1.33□□□□□ -2.2
PUS4P48567 PAA1YDR071C 576 nt1.33□□□□□ -2.2
PUS4P48567 YJL026C-AYJL026C-A 222 nt1.32□□□□□ -2.2
PUS4P48567 YCR018C-AYCR018C-A 255 nt1.31□□□□□ -2.2
PUS4P48567 APQ12YIL040W 417 nt1.31□□□□□ -2.2
PUS4P48567 YPL044CYPL044C 549 nt1.31□□□□□ -2.2
PUS4P48567 STB6YKL072W 2301 nt1.31□□□□□ -2.2
PUS4P48567 NOP9YJL010C 2001 nt1.3□□□□□ -2.2
PUS4P48567 CDC39YCR093W 6327 nt1.3□□□□□ -2.2
PUS4P48567 YAL067W-AYAL067W-A 228 nt1.3□□□□□ -2.2
PUS4P48567 RPS30BYOR182C 192 nt1.3□□□□□ -2.2
PUS4P48567 MSN5YDR335W 3675 nt1.3□□□□□ -2.2
PUS4P48567 YDL185C-AYDL185C-A 228 nt1.29□□□□□ -2.2
PUS4P48567 PAM16YJL104W 450 nt1.28□□□□□ -2.2
PUS4P48567 tQ(UUG)E2tQ(UUG)E2 72 nt1.27□□□□□ -2.21
PUS4P48567 COY1YKL179C 2040 nt1.26□□□□□ -2.21
PUS4P48567 TTI1YKL033W 3117 nt1.25□□□□□ -2.21
PUS4P48567 YCR038W-AYCR038W-A 126 nt1.25□□□□□ -2.21
PUS4P48567 RPL26BYGR034W 384 nt1.25□□□□□ -2.21
PUS4P48567 CDC31YOR257W 486 nt1.25□□□□□ -2.21
PUS4P48567 RAD9YDR217C 3930 nt1.24□□□□□ -2.21
PUS4P48567 YFR012W-AYFR012W-A 87 nt1.23□□□□□ -2.21
PUS4P48567 YGL123C-AYGL123C-A 231 nt1.23□□□□□ -2.21
PUS4P48567 snR52snR52 92 nt1.23□□□□□ -2.21
PUS4P48567 YCS4YLR272C 3531 nt1.23□□□□□ -2.21
PUS4P48567 NUP157YER105C 4176 nt1.23□□□□□ -2.21
PUS4P48567 CAT8YMR280C 4302 nt1.22□□□□□ -2.21
PUS4P48567 SPT7YBR081C 3999 nt1.22□□□□□ -2.21
PUS4P48567 COX12YLR038C 252 nt1.21□□□□□ -2.22
PUS4P48567 YJR029WYJR029W 5268 nt1.2□□□□□ -2.22
PUS4P48567 YPR137C-BYPR137C-B 5268 nt1.2□□□□□ -2.22
PUS4P48567 YIL020C-AYIL020C-A 339 nt1.2□□□□□ -2.22
PUS4P48567 YNL097C-BYNL097C-B 123 nt1.2□□□□□ -2.22
PUS4P48567 YOR161W-AYOR161W-A 81 nt1.2□□□□□ -2.22
PUS4P48567 RPL33BYOR234C 324 nt1.2□□□□□ -2.22
PUS4P48567 YIL134C-AYIL134C-A 204 nt1.19□□□□□ -2.22
PUS4P48567 YLR282CYLR282C 342 nt1.19□□□□□ -2.22
PUS4P48567 YNL337WYNL337W 255 nt1.19□□□□□ -2.22
PUS4P48567 snR190snR190 190 nt1.18□□□□□ -2.22
PUS4P48567 YKL100W-AYKL100W-A 90 nt1.17□□□□□ -2.22
PUS4P48567 YER053C-AYER053C-A 114 nt1.16□□□□□ -2.22
PUS4P48567 UTP8YGR128C 2142 nt1.16□□□□□ -2.22
PUS4P48567 YML002WYML002W 2214 nt1.15□□□□□ -2.23
PUS4P48567 tH(GUG)E1tH(GUG)E1 72 nt1.15□□□□□ -2.23
PUS4P48567 tH(GUG)E2tH(GUG)E2 72 nt1.15□□□□□ -2.23
PUS4P48567 tH(GUG)G1tH(GUG)G1 72 nt1.15□□□□□ -2.23
PUS4P48567 tH(GUG)G2tH(GUG)G2 72 nt1.15□□□□□ -2.23
PUS4P48567 tH(GUG)HtH(GUG)H 72 nt1.15□□□□□ -2.23
PUS4P48567 tH(GUG)KtH(GUG)K 72 nt1.15□□□□□ -2.23
PUS4P48567 tH(GUG)MtH(GUG)M 72 nt1.15□□□□□ -2.23
PUS4P48567 MSH3YCR092C 3057 nt1.15□□□□□ -2.23
PUS4P48567 PRP16YKR086W 3216 nt1.15□□□□□ -2.23
PUS4P48567 BFR2YDR299W 1605 nt1.15□□□□□ -2.23
PUS4P48567 CDC25YLR310C 4770 nt1.15□□□□□ -2.23
PUS4P48567 YIL002W-AYIL002W-A 210 nt1.14□□□□□ -2.23
PUS4P48567 COX5BYIL111W 456 nt1.14□□□□□ -2.23
PUS4P48567 YLR342W-AYLR342W-A 174 nt1.14□□□□□ -2.23
PUS4P48567 YNL198CYNL198C 303 nt1.14□□□□□ -2.23
PUS4P48567 SAC3YDR159W 3906 nt1.13□□□□□ -2.23
PUS4P48567 YGR130CYGR130C 2451 nt1.12□□□□□ -2.23
PUS4P48567 tV(UAC)BtV(UAC)B 74 nt1.11□□□□□ -2.23
PUS4P48567 tV(UAC)DtV(UAC)D 74 nt1.11□□□□□ -2.23
PUS4P48567 YJL182CYJL182C 318 nt1.11□□□□□ -2.23
PUS4P48567 FYV10YIL097W 1551 nt1.1□□□□□ -2.23
PUS4P48567 PMP1YCR024C-A 123 nt1.1□□□□□ -2.23
PUS4P48567 SEC8YPR055W 3198 nt1.09□□□□□ -2.23
PUS4P48567 YEL073CYEL073C 324 nt1.09□□□□□ -2.23
PUS4P48567 YJL150WYJL150W 303 nt1.09□□□□□ -2.23
PUS4P48567 snR46snR46 197 nt1.09□□□□□ -2.23
PUS4P48567 ASE1YOR058C 2658 nt1.08□□□□□ -2.24
PUS4P48567 PRP5YBR237W 2550 nt1.08□□□□□ -2.24
PUS4P48567 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
PUS4P48567 PRP42YDR235W 1635 nt1.07□□□□□ -2.24
PUS4P48567 YLR466C-BYLR466C-B 117 nt1.07□□□□□ -2.24
PUS4P48567 ROM2YLR371W 4071 nt1.07□□□□□ -2.24
PUS4P48567 YGR151CYGR151C 336 nt1.06□□□□□ -2.24
PUS4P48567 RKR1YMR247C 4689 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms