Protein–RNA interactions for Protein: P40339

RFC4, Replication factor C subunit 4, yeastyeast

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC4P40339 YOR345CYOR345C 351 nt0□□□□□ -2.41
RFC4P40339 snR45snR45 172 nt0□□□□□ -2.41
RFC4P40339 CBS1YDL069C 690 nt-0.01□□□□□ -2.41
RFC4P40339 BI2Q0110 1272 nt-0.01□□□□□ -2.41
RFC4P40339 YGR174W-AYGR174W-A 87 nt-0.01□□□□□ -2.41
RFC4P40339 YOR053WYOR053W 342 nt-0.01□□□□□ -2.41
RFC4P40339 HMRA2YCR096C 360 nt-0.02□□□□□ -2.41
RFC4P40339 RPS26AYGL189C 360 nt-0.03□□□□□ -2.41
RFC4P40339 FYV7YLR068W 456 nt-0.03□□□□□ -2.41
RFC4P40339 YAR047CYAR047C 321 nt-0.03□□□□□ -2.41
RFC4P40339 YOR011W-AYOR011W-A 207 nt-0.03□□□□□ -2.41
RFC4P40339 LEE1YPL054W 906 nt-0.03□□□□□ -2.41
RFC4P40339 MRPL50YNR022C 420 nt-0.04□□□□□ -2.42
RFC4P40339 PCF11YDR228C 1881 nt-0.04□□□□□ -2.42
RFC4P40339 YDR426CYDR426C 378 nt-0.05□□□□□ -2.42
RFC4P40339 YLR456WYLR456W 615 nt-0.05□□□□□ -2.42
RFC4P40339 YOR186C-AYOR186C-A 210 nt-0.05□□□□□ -2.42
RFC4P40339 NNF2YGR089W 2811 nt-0.06□□□□□ -2.42
RFC4P40339 YDL185C-AYDL185C-A 228 nt-0.06□□□□□ -2.42
RFC4P40339 ECL1YGR146C 636 nt-0.06□□□□□ -2.42
RFC4P40339 TAR1YLR154W-C 375 nt-0.06□□□□□ -2.42
RFC4P40339 YNR025CYNR025C 360 nt-0.06□□□□□ -2.42
RFC4P40339 YPL225WYPL225W 441 nt-0.06□□□□□ -2.42
RFC4P40339 snR190snR190 190 nt-0.06□□□□□ -2.42
RFC4P40339 YMR307C-AYMR307C-A 195 nt-0.07□□□□□ -2.42
RFC4P40339 YNL122CYNL122C 348 nt-0.07□□□□□ -2.42
RFC4P40339 YNL146WYNL146W 303 nt-0.07□□□□□ -2.42
RFC4P40339 COG8YML071C 1824 nt-0.08□□□□□ -2.42
RFC4P40339 RPL35AYDL191W 363 nt-0.08□□□□□ -2.42
RFC4P40339 ULI1YFR026C 510 nt-0.08□□□□□ -2.42
RFC4P40339 tN(GUU)QtN(GUU)Q 71 nt-0.08□□□□□ -2.42
RFC4P40339 YLR334CYLR334C 381 nt-0.08□□□□□ -2.42
RFC4P40339 SGF11YPL047W 300 nt-0.08□□□□□ -2.42
RFC4P40339 NIP1YMR309C 2439 nt-0.09□□□□□ -2.42
RFC4P40339 SSS1YDR086C 243 nt-0.1□□□□□ -2.43
RFC4P40339 YER006C-AYER006C-A 318 nt-0.1□□□□□ -2.43
RFC4P40339 PCC1YKR095W-A 267 nt-0.1□□□□□ -2.43
RFC4P40339 YLR101CYLR101C 396 nt-0.1□□□□□ -2.43
RFC4P40339 YJL120WYJL120W 324 nt-0.11□□□□□ -2.43
RFC4P40339 RPS25BYLR333C 327 nt-0.11□□□□□ -2.43
RFC4P40339 YNL303WYNL303W 348 nt-0.11□□□□□ -2.43
RFC4P40339 YAR053WYAR053W 297 nt-0.12□□□□□ -2.43
RFC4P40339 YPL068CYPL068C 882 nt-0.12□□□□□ -2.43
RFC4P40339 YLR232WYLR232W 348 nt-0.13□□□□□ -2.43
RFC4P40339 YCR018C-AYCR018C-A 255 nt-0.14□□□□□ -2.43
RFC4P40339 COY1YKL179C 2040 nt-0.14□□□□□ -2.43
RFC4P40339 YKU70YMR284W 1809 nt-0.15□□□□□ -2.43
RFC4P40339 YCR022CYCR022C 345 nt-0.16□□□□□ -2.44
RFC4P40339 SOV1YMR066W 2697 nt-0.17□□□□□ -2.44
RFC4P40339 YHR131W-AYHR131W-A 246 nt-0.19□□□□□ -2.44
RFC4P40339 YOL013W-BYOL013W-B 291 nt-0.19□□□□□ -2.44
RFC4P40339 CSE1YGL238W 2883 nt-0.19□□□□□ -2.44
RFC4P40339 TFB5YDR079C-A 219 nt-0.2□□□□□ -2.44
RFC4P40339 TOM22YNL131W 459 nt-0.2□□□□□ -2.44
RFC4P40339 snR41snR41 95 nt-0.2□□□□□ -2.44
RFC4P40339 YHR007C-AYHR007C-A 216 nt-0.22□□□□□ -2.44
RFC4P40339 VPS20YMR077C 666 nt-0.22□□□□□ -2.44
RFC4P40339 YHR138CYHR138C 345 nt-0.23□□□□□ -2.45
RFC4P40339 YLL006W-AYLL006W-A 177 nt-0.23□□□□□ -2.45
RFC4P40339 YLR282CYLR282C 342 nt-0.24□□□□□ -2.45
RFC4P40339 YPR092WYPR092W 306 nt-0.24□□□□□ -2.45
RFC4P40339 YEL073CYEL073C 324 nt-0.25□□□□□ -2.45
RFC4P40339 YKL136WYKL136W 399 nt-0.26□□□□□ -2.45
RFC4P40339 YJL026C-AYJL026C-A 222 nt-0.28□□□□□ -2.45
RFC4P40339 snR128snR128 126 nt-0.28□□□□□ -2.45
RFC4P40339 snR8snR8 190 nt-0.29□□□□□ -2.46
RFC4P40339 YDR354C-AYDR354C-A 144 nt-0.29□□□□□ -2.46
RFC4P40339 YGR164WYGR164W 336 nt-0.29□□□□□ -2.46
RFC4P40339 YAR029WYAR029W 225 nt-0.3□□□□□ -2.46
RFC4P40339 TAH1YCR060W 336 nt-0.31□□□□□ -2.46
RFC4P40339 YLR041WYLR041W 321 nt-0.31□□□□□ -2.46
RFC4P40339 YLR434CYLR434C 384 nt-0.31□□□□□ -2.46
RFC4P40339 CSN9YDR179C 489 nt-0.32□□□□□ -2.46
RFC4P40339 YEL050W-AYEL050W-A 192 nt-0.32□□□□□ -2.46
RFC4P40339 YDR210WYDR210W 228 nt-0.35□□□□□ -2.47
RFC4P40339 HTB2YBL002W 396 nt-0.35□□□□□ -2.47
RFC4P40339 YDL158CYDL158C 309 nt-0.36□□□□□ -2.47
RFC4P40339 YEL020C-BYEL020C-B 198 nt-0.36□□□□□ -2.47
RFC4P40339 ATP19YOL077W-A 207 nt-0.36□□□□□ -2.47
RFC4P40339 PRM3YPL192C 402 nt-0.36□□□□□ -2.47
RFC4P40339 SNU13YEL026W 381 nt-0.37□□□□□ -2.47
RFC4P40339 SBH2YER019C-A 267 nt-0.37□□□□□ -2.47
RFC4P40339 YOR161W-AYOR161W-A 81 nt-0.37□□□□□ -2.47
RFC4P40339 YKL100W-AYKL100W-A 90 nt-0.38□□□□□ -2.47
RFC4P40339 snR46snR46 197 nt-0.38□□□□□ -2.47
RFC4P40339 YGL123C-AYGL123C-A 231 nt-0.39□□□□□ -2.47
RFC4P40339 BLI1YKL061W 342 nt-0.4□□□□□ -2.47
RFC4P40339 YJL113WYJL113W 4647 nt-0.42□□□□□ -2.48
RFC4P40339 YDR366CYDR366C 399 nt-0.42□□□□□ -2.48
RFC4P40339 RPS27BYHR021C 249 nt-0.42□□□□□ -2.48
RFC4P40339 YJL007CYJL007C 315 nt-0.42□□□□□ -2.48
RFC4P40339 YLR406C-AYLR406C-A 150 nt-0.42□□□□□ -2.48
RFC4P40339 YFL063WYFL063W 456 nt-0.44□□□□□ -2.48
RFC4P40339 YKL063CYKL063C 504 nt-0.44□□□□□ -2.48
RFC4P40339 YBR072C-AYBR072C-A 162 nt-0.44□□□□□ -2.48
RFC4P40339 YBR099CYBR099C 384 nt-0.44□□□□□ -2.48
RFC4P40339 GLG1YKR058W 1851 nt-0.46□□□□□ -2.48
RFC4P40339 YIL115W-AYIL115W-A 372 nt-0.46□□□□□ -2.48
RFC4P40339 YMR158W-BYMR158W-B 321 nt-0.46□□□□□ -2.48
RFC4P40339 YPL205CYPL205C 345 nt-0.46□□□□□ -2.48
Retrieved 100 of 7,029 protein–RNA pairs in 28.9 ms