Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 SIR4YDR227W 4077 nt3.21□□□□□ -1.9
UBP9P39967 DRS2YAL026C 4068 nt3.21□□□□□ -1.9
UBP9P39967 RSE1YML049C 4086 nt3.21□□□□□ -1.9
UBP9P39967 YSP2YDR326C 4317 nt3.2□□□□□ -1.9
UBP9P39967 MSB2YGR014W 3921 nt3.2□□□□□ -1.9
UBP9P39967 RPO41YFL036W 4056 nt3.2□□□□□ -1.9
UBP9P39967 MYO5YMR109W 3660 nt3.19□□□□□ -1.9
UBP9P39967 YDR210W-BYDR210W-B 5313 nt3.19□□□□□ -1.9
UBP9P39967 YDR261W-BYDR261W-B 5313 nt3.19□□□□□ -1.9
UBP9P39967 YFL002W-AYFL002W-A 5313 nt3.19□□□□□ -1.9
UBP9P39967 YGR161W-BYGR161W-B 5313 nt3.19□□□□□ -1.9
UBP9P39967 YLR410W-BYLR410W-B 5313 nt3.19□□□□□ -1.9
UBP9P39967 YCL019WYCL019W 5313 nt3.19□□□□□ -1.9
UBP9P39967 NST1YNL091W 3723 nt3.19□□□□□ -1.9
UBP9P39967 ISW1YBR245C 3390 nt3.18□□□□□ -1.9
UBP9P39967 snR69snR69 101 nt3.18□□□□□ -1.9
UBP9P39967 YAL042C-AYAL042C-A 378 nt3.18□□□□□ -1.9
UBP9P39967 ADR1YDR216W 3972 nt3.18□□□□□ -1.9
UBP9P39967 MMS22YLR320W 4365 nt3.17□□□□□ -1.9
UBP9P39967 CSR2YPR030W 3366 nt3.16□□□□□ -1.9
UBP9P39967 FAR11YNL127W 2862 nt3.16□□□□□ -1.9
UBP9P39967 RGR1YLR071C 3249 nt3.15□□□□□ -1.9
UBP9P39967 POL2YNL262W 6669 nt3.15□□□□□ -1.9
UBP9P39967 GYP5YPL249C 2685 nt3.15□□□□□ -1.91
UBP9P39967 YPR160W-AYPR160W-A 81 nt3.14□□□□□ -1.91
UBP9P39967 SDC25YLL016W 3147 nt3.14□□□□□ -1.91
UBP9P39967 YPL216WYPL216W 3309 nt3.14□□□□□ -1.91
UBP9P39967 ROM1YGR070W 3468 nt3.13□□□□□ -1.91
UBP9P39967 BUB1YGR188C 3066 nt3.13□□□□□ -1.91
UBP9P39967 TAO3YIL129C 7131 nt3.13□□□□□ -1.91
UBP9P39967 SEC3YER008C 4011 nt3.13□□□□□ -1.91
UBP9P39967 TFC3YAL001C 3483 nt3.13□□□□□ -1.91
UBP9P39967 snR70snR70 164 nt3.11□□□□□ -1.91
UBP9P39967 tW(CCA)G1tW(CCA)G1 72 nt3.11□□□□□ -1.91
UBP9P39967 tW(CCA)G2tW(CCA)G2 72 nt3.11□□□□□ -1.91
UBP9P39967 tW(CCA)JtW(CCA)J 72 nt3.11□□□□□ -1.91
UBP9P39967 tW(CCA)KtW(CCA)K 72 nt3.11□□□□□ -1.91
UBP9P39967 tW(CCA)MtW(CCA)M 72 nt3.11□□□□□ -1.91
UBP9P39967 tW(CCA)PtW(CCA)P 72 nt3.11□□□□□ -1.91
UBP9P39967 RPN1YHR027C 2982 nt3.1□□□□□ -1.91
UBP9P39967 PAN2YGL094C 3348 nt3.1□□□□□ -1.91
UBP9P39967 NAB6YML117W 3405 nt3.1□□□□□ -1.91
UBP9P39967 DNA2YHR164C 4569 nt3.09□□□□□ -1.91
UBP9P39967 SPO71YDR104C 3738 nt3.09□□□□□ -1.92
UBP9P39967 BUD4YJR092W 4344 nt3.08□□□□□ -1.92
UBP9P39967 SIN3YOL004W 4611 nt3.08□□□□□ -1.92
UBP9P39967 TAF2YCR042C 4224 nt3.08□□□□□ -1.92
UBP9P39967 SMC6YLR383W 3345 nt3.07□□□□□ -1.92
UBP9P39967 MSB1YOR188W 3414 nt3.06□□□□□ -1.92
UBP9P39967 YIL082W-AYIL082W-A 4497 nt3.06□□□□□ -1.92
UBP9P39967 ENA5YDR038C 3276 nt3.06□□□□□ -1.92
UBP9P39967 TFC4YGR047C 3078 nt3.05□□□□□ -1.92
UBP9P39967 TCB2YNL087W 3537 nt3.05□□□□□ -1.92
UBP9P39967 TSC11YER093C 4293 nt3.04□□□□□ -1.92
UBP9P39967 MYO2YOR326W 4725 nt3.04□□□□□ -1.92
UBP9P39967 ULP2YIL031W 3105 nt3.04□□□□□ -1.92
UBP9P39967 JSN1YJR091C 3276 nt3.03□□□□□ -1.92
UBP9P39967 TRM3YDL112W 4311 nt3.03□□□□□ -1.92
UBP9P39967 DYN1YKR054C 12279 nt3.03□□□□□ -1.93
UBP9P39967 CBF2YGR140W 2871 nt3.02□□□□□ -1.93
UBP9P39967 snR190snR190 190 nt3.01□□□□□ -1.93
UBP9P39967 HSL1YKL101W 4557 nt3.01□□□□□ -1.93
UBP9P39967 ATG9YDL149W 2994 nt3□□□□□ -1.93
UBP9P39967 CSE1YGL238W 2883 nt2.99□□□□□ -1.93
UBP9P39967 BPT1YLL015W 4680 nt2.98□□□□□ -1.93
UBP9P39967 YGR067CYGR067C 2415 nt2.97□□□□□ -1.93
UBP9P39967 FKS3YMR306W 5358 nt2.95□□□□□ -1.94
UBP9P39967 IKI3YLR384C 4050 nt2.94□□□□□ -1.94
UBP9P39967 DSE4YNR067C 3354 nt2.94□□□□□ -1.94
UBP9P39967 BUD2YKL092C 3315 nt2.93□□□□□ -1.94
UBP9P39967 SNQ2YDR011W 4506 nt2.93□□□□□ -1.94
UBP9P39967 AXL1YPR122W 3627 nt2.93□□□□□ -1.94
UBP9P39967 RIF1YBR275C 5751 nt2.89□□□□□ -1.95
UBP9P39967 BCK1YJL095W 4437 nt2.89□□□□□ -1.95
UBP9P39967 SEC7YDR170C 6030 nt2.88□□□□□ -1.95
UBP9P39967 ECM29YHL030W 5607 nt2.87□□□□□ -1.95
UBP9P39967 KIP1YBL063W 3336 nt2.87□□□□□ -1.95
UBP9P39967 ROM2YLR371W 4071 nt2.85□□□□□ -1.95
UBP9P39967 PAU12YGR294W 363 nt2.85□□□□□ -1.95
UBP9P39967 VPS8YAL002W 3825 nt2.85□□□□□ -1.95
UBP9P39967 SXM1YDR395W 2835 nt2.85□□□□□ -1.95
UBP9P39967 MSH3YCR092C 3057 nt2.84□□□□□ -1.95
UBP9P39967 GCN2YDR283C 4980 nt2.84□□□□□ -1.95
UBP9P39967 INP51YIL002C 2841 nt2.84□□□□□ -1.95
UBP9P39967 YNL054W-BYNL054W-B 5250 nt2.82□□□□□ -1.96
UBP9P39967 MSH6YDR097C 3729 nt2.82□□□□□ -1.96
UBP9P39967 TOM1YDR457W 9807 nt2.82□□□□□ -1.96
UBP9P39967 BST1YFL025C 3090 nt2.81□□□□□ -1.96
UBP9P39967 MOT1YPL082C 5604 nt2.81□□□□□ -1.96
UBP9P39967 TOF1YNL273W 3717 nt2.81□□□□□ -1.96
UBP9P39967 KOG1YHR186C 4674 nt2.81□□□□□ -1.96
UBP9P39967 YAR009CYAR009C 3591 nt2.8□□□□□ -1.96
UBP9P39967 PET309YLR067C 2898 nt2.79□□□□□ -1.96
UBP9P39967 YKL106C-AYKL106C-A 120 nt2.79□□□□□ -1.96
UBP9P39967 CYR1YJL005W 6081 nt2.79□□□□□ -1.96
UBP9P39967 PRP8YHR165C 7242 nt2.78□□□□□ -1.96
UBP9P39967 SSN2YDR443C 4263 nt2.77□□□□□ -1.97
UBP9P39967 YDR098C-BYDR098C-B 5268 nt2.76□□□□□ -1.97
UBP9P39967 YDR210C-DYDR210C-D 5268 nt2.76□□□□□ -1.97
UBP9P39967 YDR316W-BYDR316W-B 5268 nt2.76□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 51.7 ms