Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 YNL097C-BYNL097C-B 123 nt1.33□□□□□ -2.2
RPH1P39956 snR14snR14 160 nt1.33□□□□□ -2.2
RPH1P39956 BST1YFL025C 3090 nt1.33□□□□□ -2.2
RPH1P39956 YLR466C-BYLR466C-B 117 nt1.32□□□□□ -2.2
RPH1P39956 SEC21YNL287W 2808 nt1.31□□□□□ -2.2
RPH1P39956 YDL206WYDL206W 2289 nt1.31□□□□□ -2.2
RPH1P39956 AIM44YPL158C 2277 nt1.31□□□□□ -2.2
RPH1P39956 YDL196WYDL196W 330 nt1.31□□□□□ -2.2
RPH1P39956 ULI1YFR026C 510 nt1.31□□□□□ -2.2
RPH1P39956 YJL150WYJL150W 303 nt1.31□□□□□ -2.2
RPH1P39956 YOR345CYOR345C 351 nt1.31□□□□□ -2.2
RPH1P39956 tH(GUG)E1tH(GUG)E1 72 nt1.3□□□□□ -2.2
RPH1P39956 tH(GUG)E2tH(GUG)E2 72 nt1.3□□□□□ -2.2
RPH1P39956 tH(GUG)G1tH(GUG)G1 72 nt1.3□□□□□ -2.2
RPH1P39956 tH(GUG)G2tH(GUG)G2 72 nt1.3□□□□□ -2.2
RPH1P39956 tH(GUG)HtH(GUG)H 72 nt1.3□□□□□ -2.2
RPH1P39956 tH(GUG)KtH(GUG)K 72 nt1.3□□□□□ -2.2
RPH1P39956 tH(GUG)MtH(GUG)M 72 nt1.3□□□□□ -2.2
RPH1P39956 YGR151CYGR151C 336 nt1.3□□□□□ -2.2
RPH1P39956 SLD3YGL113W 2007 nt1.3□□□□□ -2.2
RPH1P39956 TRM732YMR259C 4263 nt1.29□□□□□ -2.2
RPH1P39956 YDR354C-AYDR354C-A 144 nt1.29□□□□□ -2.2
RPH1P39956 FIG4YNL325C 2640 nt1.29□□□□□ -2.2
RPH1P39956 YLL054CYLL054C 2532 nt1.28□□□□□ -2.2
RPH1P39956 NCA2YPR155C 1851 nt1.27□□□□□ -2.21
RPH1P39956 YLR294CYLR294C 330 nt1.27□□□□□ -2.21
RPH1P39956 MMS4YBR098W 2076 nt1.27□□□□□ -2.21
RPH1P39956 ALY2YJL084C 3141 nt1.26□□□□□ -2.21
RPH1P39956 CDC25YLR310C 4770 nt1.25□□□□□ -2.21
RPH1P39956 TTI1YKL033W 3117 nt1.25□□□□□ -2.21
RPH1P39956 snR46snR46 197 nt1.25□□□□□ -2.21
RPH1P39956 KAP122YGL016W 3246 nt1.25□□□□□ -2.21
RPH1P39956 RSM22YKL155C 1887 nt1.24□□□□□ -2.21
RPH1P39956 MSN5YDR335W 3675 nt1.24□□□□□ -2.21
RPH1P39956 YIL020C-AYIL020C-A 339 nt1.24□□□□□ -2.21
RPH1P39956 snR52snR52 92 nt1.24□□□□□ -2.21
RPH1P39956 PRP39YML046W 1890 nt1.24□□□□□ -2.21
RPH1P39956 YAR009CYAR009C 3591 nt1.23□□□□□ -2.21
RPH1P39956 YJL026C-AYJL026C-A 222 nt1.23□□□□□ -2.21
RPH1P39956 YNL338WYNL338W 159 nt1.23□□□□□ -2.21
RPH1P39956 RPL33BYOR234C 324 nt1.23□□□□□ -2.21
RPH1P39956 EST2YLR318W 2655 nt1.22□□□□□ -2.21
RPH1P39956 YLR342W-AYLR342W-A 174 nt1.22□□□□□ -2.21
RPH1P39956 TRS65YGR166W 1683 nt1.22□□□□□ -2.21
RPH1P39956 STO1YMR125W 2586 nt1.21□□□□□ -2.22
RPH1P39956 PAN2YGL094C 3348 nt1.21□□□□□ -2.22
RPH1P39956 SET3YKR029C 2256 nt1.21□□□□□ -2.22
RPH1P39956 PAA1YDR071C 576 nt1.21□□□□□ -2.22
RPH1P39956 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
RPH1P39956 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
RPH1P39956 RPS30BYOR182C 192 nt1.21□□□□□ -2.22
RPH1P39956 COY1YKL179C 2040 nt1.2□□□□□ -2.22
RPH1P39956 SCC2YDR180W 4482 nt1.2□□□□□ -2.22
RPH1P39956 DOP1YDR141C 5097 nt1.2□□□□□ -2.22
RPH1P39956 YIL134C-AYIL134C-A 204 nt1.2□□□□□ -2.22
RPH1P39956 YBR221W-AYBR221W-A 105 nt1.2□□□□□ -2.22
RPH1P39956 APL1YJR005W 2103 nt1.19□□□□□ -2.22
RPH1P39956 SMC1YFL008W 3678 nt1.19□□□□□ -2.22
RPH1P39956 SIP4YJL089W 2490 nt1.19□□□□□ -2.22
RPH1P39956 YNL211CYNL211C 261 nt1.19□□□□□ -2.22
RPH1P39956 NUP188YML103C 4968 nt1.19□□□□□ -2.22
RPH1P39956 PMP1YCR024C-A 123 nt1.18□□□□□ -2.22
RPH1P39956 RAD9YDR217C 3930 nt1.18□□□□□ -2.22
RPH1P39956 COX12YLR038C 252 nt1.17□□□□□ -2.22
RPH1P39956 YOR161W-BYOR161W-B 261 nt1.17□□□□□ -2.22
RPH1P39956 APL3YBL037W 3078 nt1.17□□□□□ -2.22
RPH1P39956 SWI4YER111C 3282 nt1.16□□□□□ -2.22
RPH1P39956 HAL9YOL089C 3093 nt1.16□□□□□ -2.22
RPH1P39956 AZF1YOR113W 2745 nt1.16□□□□□ -2.22
RPH1P39956 YCR038W-AYCR038W-A 126 nt1.16□□□□□ -2.22
RPH1P39956 YAL067W-AYAL067W-A 228 nt1.16□□□□□ -2.22
RPH1P39956 GEA2YEL022W 4380 nt1.16□□□□□ -2.22
RPH1P39956 SPT7YBR081C 3999 nt1.16□□□□□ -2.22
RPH1P39956 WAR1YML076C 2835 nt1.16□□□□□ -2.22
RPH1P39956 NST1YNL091W 3723 nt1.15□□□□□ -2.23
RPH1P39956 YCS4YLR272C 3531 nt1.14□□□□□ -2.23
RPH1P39956 BEM2YER155C 6504 nt1.14□□□□□ -2.23
RPH1P39956 YEL073CYEL073C 324 nt1.14□□□□□ -2.23
RPH1P39956 UBP3YER151C 2739 nt1.13□□□□□ -2.23
RPH1P39956 YPR117WYPR117W 7470 nt1.12□□□□□ -2.23
RPH1P39956 VAM6YDL077C 3150 nt1.12□□□□□ -2.23
RPH1P39956 STF2YGR008C 255 nt1.12□□□□□ -2.23
RPH1P39956 YLL020CYLL020C 306 nt1.12□□□□□ -2.23
RPH1P39956 CMC4YMR194C-B 222 nt1.12□□□□□ -2.23
RPH1P39956 YPL044CYPL044C 549 nt1.12□□□□□ -2.23
RPH1P39956 YBR200W-AYBR200W-A 165 nt1.12□□□□□ -2.23
RPH1P39956 NUP157YER105C 4176 nt1.11□□□□□ -2.23
RPH1P39956 EAF1YDR359C 2949 nt1.11□□□□□ -2.23
RPH1P39956 CDC39YCR093W 6327 nt1.11□□□□□ -2.23
RPH1P39956 NUP145YGL092W 3954 nt1.1□□□□□ -2.23
RPH1P39956 NOP9YJL010C 2001 nt1.1□□□□□ -2.23
RPH1P39956 YIL002W-AYIL002W-A 210 nt1.1□□□□□ -2.23
RPH1P39956 YOR381W-AYOR381W-A 168 nt1.1□□□□□ -2.23
RPH1P39956 YER053C-AYER053C-A 114 nt1.09□□□□□ -2.23
RPH1P39956 YFR012W-AYFR012W-A 87 nt1.09□□□□□ -2.23
RPH1P39956 YGL123C-AYGL123C-A 231 nt1.09□□□□□ -2.23
RPH1P39956 YOR161W-AYOR161W-A 81 nt1.09□□□□□ -2.23
RPH1P39956 ROM2YLR371W 4071 nt1.09□□□□□ -2.24
RPH1P39956 YNL284C-BYNL284C-B 5268 nt1.08□□□□□ -2.24
RPH1P39956 STB6YKL072W 2301 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 52.8 ms